RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 ANKRD18AQ8IVF6 992 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 SIRT2Q8IXJ6 389 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 HELBQ8NG08 1087 aaPredicted RBP11.31□□□□□ -0.6
LINC00343-212ENST00000608624 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 SIL1Q9H173 461 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 ZNF277Q9NRM2 450 aaPredicted RBP11.31□□□□□ -0.6
LINC00343-212ENST00000608624 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
LINC00343-212ENST00000608624 PTPN12Q05209 780 aaKnown RBP11.3□□□□□ -0.6
LINC00343-212ENST00000608624 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.3□□□□□ -0.6
LINC00343-212ENST00000608624 DDX19BQ9UMR2 479 aa11.3□□□□□ -0.6
LINC00343-212ENST00000608624 MINPP1Q9UNW1 487 aa11.3□□□□□ -0.6
LINC00343-212ENST00000608624 SRGAP3O43295 1099 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 TAF5LO75529 589 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 BBOX1O75936 387 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
LINC00343-212ENST00000608624 MTX1Q13505 466 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 CCDC93Q567U6 631 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 ATG9AQ7Z3C6 839 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
LINC00343-212ENST00000608624 POLLQ9UGP5 575 aa11.29□□□□□ -0.6
LINC00343-212ENST00000608624 MS4A1P11836 297 aa11.28□□□□□ -0.6
LINC00343-212ENST00000608624 CHRNDQ07001 517 aa11.28□□□□□ -0.6
LINC00343-212ENST00000608624 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-212ENST00000608624 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
LINC00343-212ENST00000608624 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 UFL1O94874 794 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 HOXB1P14653 301 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-212ENST00000608624 IGHMBP2P38935 993 aaKnown RBP11.27□□□□□ -0.61
LINC00343-212ENST00000608624 FKBP4Q02790 459 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00343-212ENST00000608624 AOC3Q16853 763 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 TAF7LQ5H9L4 462 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-212ENST00000608624 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 VGLL2Q8N8G2 317 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
LINC00343-212ENST00000608624 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 IRS2Q9Y4H2 1338 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 CHD4Q14839 1912 aa11.27□□□□□ -0.61
LINC00343-212ENST00000608624 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 C9orf131Q5VYM1 1079 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 LDHAL6AQ6ZMR3 332 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 MPNDQ8N594 471 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 SSH3Q8TE77 659 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 MPHOSPH8Q99549 860 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
LINC00343-212ENST00000608624 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 DICER1Q9UPY3 1922 aaKnown RBP11.26□□□□□ -0.61
LINC00343-212ENST00000608624 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
LINC00343-212ENST00000608624 ZNF646O15015 1829 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-212ENST00000608624 EYA2O00167 538 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
LINC00343-212ENST00000608624 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 PSMD1Q99460 953 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 EXOC6BQ9Y2D4 811 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 XDHP47989 1333 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
LINC00343-212ENST00000608624 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
LINC00343-212ENST00000608624 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
LINC00343-212ENST00000608624 KCNQ5Q9NR82 932 aa11.24□□□□□ -0.61
LINC00343-212ENST00000608624 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
LINC00343-212ENST00000608624 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 APBB1O00213 710 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 PPIP5K2O43314 1243 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 SASH1O94885 1247 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 LMNB1P20700 586 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 ADORA1P30542 326 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 IARSP41252 1262 aaKnown RBP11.23□□□□□ -0.61
LINC00343-212ENST00000608624 TFCP2Q12800 502 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 METTL24Q5JXM2 366 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 SOGA3Q5TF21 947 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 ZNF609O15014 1411 aa11.23□□□□□ -0.61
LINC00343-212ENST00000608624 COL1A1P02452 1464 aaPredicted RBP11.23□□□□□ -0.61
LINC00343-212ENST00000608624 ZNF804BA4D1E1 1349 aa11.22□□□□□ -0.61
LINC00343-212ENST00000608624 CIAO1O76071 339 aa11.22□□□□□ -0.61
LINC00343-212ENST00000608624 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
LINC00343-212ENST00000608624 CC2D2BQ6DHV5 1058 aa11.22□□□□□ -0.61
LINC00343-212ENST00000608624 MED23Q9ULK4 1368 aa11.21□□□□□ -0.61
LINC00343-212ENST00000608624 MROH5Q6ZUA9 1318 aa11.21□□□□□ -0.61
LINC00343-212ENST00000608624 SURF6O75683 361 aaKnown RBP11.21□□□□□ -0.61
LINC00343-212ENST00000608624 FGFR2P21802 821 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms