RNA–Protein interactions for RNA: ENST00000608272.1

LINC00963-210, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 612 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-210ENST00000608272 IFNL1Q8IU54 200 aa16.85■□□□□ 0.29
LINC00963-210ENST00000608272 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
LINC00963-210ENST00000608272 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
LINC00963-210ENST00000608272 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
LINC00963-210ENST00000608272 PCCAP05165 728 aaPredicted RBP16.84■□□□□ 0.29
LINC00963-210ENST00000608272 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
LINC00963-210ENST00000608272 DACT2Q5SW24 774 aa16.84■□□□□ 0.29
LINC00963-210ENST00000608272 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
LINC00963-210ENST00000608272 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
LINC00963-210ENST00000608272 COA1Q9GZY4 146 aa16.84■□□□□ 0.29
LINC00963-210ENST00000608272 POTEFA5A3E0 1075 aa16.83■□□□□ 0.28
LINC00963-210ENST00000608272 COL4A1P02462 1669 aa16.83■□□□□ 0.28
LINC00963-210ENST00000608272 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
LINC00963-210ENST00000608272 TMEM106CQ9BVX2 250 aa16.83■□□□□ 0.28
LINC00963-210ENST00000608272 ATP5J2-PTCD1G3V325 749 aa16.82■□□□□ 0.28
LINC00963-210ENST00000608272 PPP1R12BO60237 982 aaPredicted RBP16.82■□□□□ 0.28
LINC00963-210ENST00000608272 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
LINC00963-210ENST00000608272 SLC10A4Q96EP9 437 aa16.82■□□□□ 0.28
LINC00963-210ENST00000608272 SEC31BQ9NQW1 1179 aa16.82■□□□□ 0.28
LINC00963-210ENST00000608272 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
LINC00963-210ENST00000608272 ZBED3Q96IU2 234 aaPredicted RBP16.81■□□□□ 0.28
LINC00963-210ENST00000608272 R3HDMLQ9H3Y0 253 aa16.81■□□□□ 0.28
LINC00963-210ENST00000608272 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
LINC00963-210ENST00000608272 BSDC1Q9NW68 430 aaPredicted RBP16.81■□□□□ 0.28
LINC00963-210ENST00000608272 ANGEL1Q9UNK9 670 aaKnown RBP16.81■□□□□ 0.28
LINC00963-210ENST00000608272 MTMR14Q8NCE2 650 aa16.8■□□□□ 0.28
LINC00963-210ENST00000608272 LEMD3Q9Y2U8 911 aa16.8■□□□□ 0.28
LINC00963-210ENST00000608272 TESPA1A2RU30 521 aaPredicted RBP16.79■□□□□ 0.28
LINC00963-210ENST00000608272 SP3Q02447 781 aa16.79■□□□□ 0.28
LINC00963-210ENST00000608272 SUPT20HL1Q3ZLR7 823 aa16.79■□□□□ 0.28
LINC00963-210ENST00000608272 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
LINC00963-210ENST00000608272 RIC3Q7Z5B4 369 aa16.79■□□□□ 0.28
LINC00963-210ENST00000608272 WNK4Q96J92 1243 aa16.79■□□□□ 0.28
LINC00963-210ENST00000608272 ZNF646O15015 1829 aaPredicted RBP16.79■□□□□ 0.28
LINC00963-210ENST00000608272 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
LINC00963-210ENST00000608272 ZNF333Q96JL9 665 aa16.78■□□□□ 0.28
LINC00963-210ENST00000608272 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
LINC00963-210ENST00000608272 IGF2BP3O00425 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00963-210ENST00000608272 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.28
LINC00963-210ENST00000608272 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.28
LINC00963-210ENST00000608272 DEFB129Q9H1M3 183 aa16.77■□□□□ 0.28
LINC00963-210ENST00000608272 ZNF804BA4D1E1 1349 aa16.76■□□□□ 0.27
LINC00963-210ENST00000608272 EN2P19622 333 aaPredicted RBP16.76■□□□□ 0.27
LINC00963-210ENST00000608272 IREB2P48200 963 aaKnown RBP16.76■□□□□ 0.27
LINC00963-210ENST00000608272 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
LINC00963-210ENST00000608272 MINPP1Q9UNW1 487 aa16.76■□□□□ 0.27
LINC00963-210ENST00000608272 COLQQ9Y215 455 aaPredicted RBP16.76■□□□□ 0.27
LINC00963-210ENST00000608272 MYO1BO43795 1136 aa16.75■□□□□ 0.27
LINC00963-210ENST00000608272 DDX58O95786 925 aaKnown RBP16.75■□□□□ 0.27
LINC00963-210ENST00000608272 GNRH1P01148 92 aa16.75■□□□□ 0.27
LINC00963-210ENST00000608272 CTSWP56202 376 aa16.75■□□□□ 0.27
LINC00963-210ENST00000608272 CRHR2Q13324 411 aa16.75■□□□□ 0.27
LINC00963-210ENST00000608272 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
LINC00963-210ENST00000608272 CD99L2Q8TCZ2 262 aa16.75■□□□□ 0.27
LINC00963-210ENST00000608272 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
LINC00963-210ENST00000608272 SASH1O94885 1247 aa16.74■□□□□ 0.27
LINC00963-210ENST00000608272 FKBP1AP62942 108 aaKnown RBP16.74■□□□□ 0.27
LINC00963-210ENST00000608272 DLGAP5Q15398 846 aa16.74■□□□□ 0.27
LINC00963-210ENST00000608272 KRT24Q2M2I5 525 aa16.74■□□□□ 0.27
LINC00963-210ENST00000608272 DUSP27Q5VZP5 1158 aa16.74■□□□□ 0.27
LINC00963-210ENST00000608272 SCAF8Q9UPN6 1271 aaKnown RBP16.74■□□□□ 0.27
LINC00963-210ENST00000608272 ECM29Q5VYK3 1845 aa16.74■□□□□ 0.27
LINC00963-210ENST00000608272 WDHD1O75717 1129 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-210ENST00000608272 PRMT2P55345 433 aa16.73■□□□□ 0.27
LINC00963-210ENST00000608272 SLC9C1Q4G0N8 1177 aa16.73■□□□□ 0.27
LINC00963-210ENST00000608272 OTUD5Q96G74 571 aa16.73■□□□□ 0.27
LINC00963-210ENST00000608272 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-210ENST00000608272 ZCCHC17Q9NP64 241 aaKnown RBP16.73■□□□□ 0.27
LINC00963-210ENST00000608272 MYH3P11055 1940 aa16.72■□□□□ 0.27
LINC00963-210ENST00000608272 CAPN2P17655 700 aa16.72■□□□□ 0.27
LINC00963-210ENST00000608272 PRKG1Q13976 671 aa16.72■□□□□ 0.27
LINC00963-210ENST00000608272 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
LINC00963-210ENST00000608272 MYD88Q99836 296 aa16.72■□□□□ 0.27
LINC00963-210ENST00000608272 TRIOBPQ9H2D6 2365 aa16.72■□□□□ 0.27
LINC00963-210ENST00000608272 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
LINC00963-210ENST00000608272 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
LINC00963-210ENST00000608272 C15orf52Q6ZUT6 534 aaKnown RBP16.71■□□□□ 0.27
LINC00963-210ENST00000608272 KIAA0825Q8IV33 1275 aa16.71■□□□□ 0.27
LINC00963-210ENST00000608272 FBXW7Q969H0 707 aa16.71■□□□□ 0.27
LINC00963-210ENST00000608272 ZFYVE28Q9HCC9 887 aa16.71■□□□□ 0.27
LINC00963-210ENST00000608272 HTTP42858 3142 aa16.71■□□□□ 0.27
LINC00963-210ENST00000608272 CEP290O15078 2479 aa16.7■□□□□ 0.26
LINC00963-210ENST00000608272 SSC5DA1L4H1 1573 aa16.7■□□□□ 0.26
LINC00963-210ENST00000608272 RALBP1Q15311 655 aa16.7■□□□□ 0.26
LINC00963-210ENST00000608272 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
LINC00963-210ENST00000608272 NKX2-3Q8TAU0 364 aa16.7■□□□□ 0.26
LINC00963-210ENST00000608272 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
LINC00963-210ENST00000608272 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
LINC00963-210ENST00000608272 MKI67P46013 3256 aaKnown RBP16.7■□□□□ 0.26
LINC00963-210ENST00000608272 A0A1W2PPC1 479 aa16.69■□□□□ 0.26
LINC00963-210ENST00000608272 CALD1Q05682 793 aaKnown RBP16.69■□□□□ 0.26
LINC00963-210ENST00000608272 ZNF428Q96B54 188 aa16.69■□□□□ 0.26
LINC00963-210ENST00000608272 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
LINC00963-210ENST00000608272 MXD3Q9BW11 206 aa16.69■□□□□ 0.26
LINC00963-210ENST00000608272 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
LINC00963-210ENST00000608272 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
LINC00963-210ENST00000608272 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
LINC00963-210ENST00000608272 GTF2A2P52657 109 aa16.68■□□□□ 0.26
LINC00963-210ENST00000608272 GTF2IP78347 998 aa16.68■□□□□ 0.26
LINC00963-210ENST00000608272 PTPN18Q99952 460 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms