RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 MAP1SQ66K74 1059 aaPredicted RBP20.71■□□□□ 0.91
LINC00240-203ENST00000606878 RSBN1LQ6PCB5 846 aaPredicted RBP20.71■□□□□ 0.91
LINC00240-203ENST00000606878 MICALL2Q8IY33 904 aa20.71■□□□□ 0.91
LINC00240-203ENST00000606878 AGBL3Q8NEM8 1001 aa20.71■□□□□ 0.91
LINC00240-203ENST00000606878 TNNQ9UQP3 1299 aa20.71■□□□□ 0.91
LINC00240-203ENST00000606878 LRRFIP2Q9Y608 721 aaKnown RBP20.71■□□□□ 0.91
LINC00240-203ENST00000606878 ITGBL1O95965 494 aaPredicted RBP20.7■□□□□ 0.9
LINC00240-203ENST00000606878 KLRK1P26718 216 aa20.7■□□□□ 0.9
LINC00240-203ENST00000606878 LRRC24Q50LG9 513 aa20.69■□□□□ 0.9
LINC00240-203ENST00000606878 METTL24Q5JXM2 366 aa20.69■□□□□ 0.9
LINC00240-203ENST00000606878 STRIP1Q5VSL9 837 aa20.69■□□□□ 0.9
LINC00240-203ENST00000606878 FTSJ3Q8IY81 847 aaKnown RBP20.69■□□□□ 0.9
LINC00240-203ENST00000606878 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
LINC00240-203ENST00000606878 ZC3H15Q8WU90 426 aaKnown RBP20.69■□□□□ 0.9
LINC00240-203ENST00000606878 CD209Q9NNX6 404 aa20.69■□□□□ 0.9
LINC00240-203ENST00000606878 SHTN1A0MZ66 631 aa20.68■□□□□ 0.9
LINC00240-203ENST00000606878 RFX5P48382 616 aaPredicted RBP20.68■□□□□ 0.9
LINC00240-203ENST00000606878 RBM26Q5T8P6 1007 aaKnown RBP20.68■□□□□ 0.9
LINC00240-203ENST00000606878 TTLL5Q6EMB2 1281 aa20.68■□□□□ 0.9
LINC00240-203ENST00000606878 ZNF804AQ7Z570 1209 aa20.68■□□□□ 0.9
LINC00240-203ENST00000606878 DZIP1LQ8IYY4 767 aaKnown RBP20.68■□□□□ 0.9
LINC00240-203ENST00000606878 TMEM57Q8N5G2 664 aa20.68■□□□□ 0.9
LINC00240-203ENST00000606878 FBXW7Q969H0 707 aa20.68■□□□□ 0.9
LINC00240-203ENST00000606878 EYA2O00167 538 aa20.67■□□□□ 0.9
LINC00240-203ENST00000606878 GNAI2P04899 355 aa20.67■□□□□ 0.9
LINC00240-203ENST00000606878 HIRAP54198 1017 aaPredicted RBP20.67■□□□□ 0.9
LINC00240-203ENST00000606878 PTPN12Q05209 780 aaKnown RBP20.67■□□□□ 0.9
LINC00240-203ENST00000606878 SAMD7Q7Z3H4 446 aa20.67■□□□□ 0.9
LINC00240-203ENST00000606878 PGAP2Q9UHJ9 254 aa20.67■□□□□ 0.9
LINC00240-203ENST00000606878 FBXO3Q9UK99 471 aa20.67■□□□□ 0.9
LINC00240-203ENST00000606878 PDE8BO95263 885 aa20.66■□□□□ 0.9
LINC00240-203ENST00000606878 USP17L8P0C7I0 530 aa20.66■□□□□ 0.9
LINC00240-203ENST00000606878 GTF2IP78347 998 aa20.66■□□□□ 0.9
LINC00240-203ENST00000606878 TBC1D10BQ4KMP7 808 aaPredicted RBP20.66■□□□□ 0.9
LINC00240-203ENST00000606878 DACT2Q5SW24 774 aa20.66■□□□□ 0.9
LINC00240-203ENST00000606878 GMLQ99445 158 aa20.66■□□□□ 0.9
LINC00240-203ENST00000606878 PASKQ96RG2 1323 aa20.65■□□□□ 0.9
LINC00240-203ENST00000606878 IRS2Q9Y4H2 1338 aa20.65■□□□□ 0.9
LINC00240-203ENST00000606878 MS4A1P11836 297 aa20.65■□□□□ 0.9
LINC00240-203ENST00000606878 HIBADHP31937 336 aaKnown RBP20.65■□□□□ 0.9
LINC00240-203ENST00000606878 HTRA3P83110 453 aa20.65■□□□□ 0.9
LINC00240-203ENST00000606878 OGFOD1Q8N543 542 aa20.65■□□□□ 0.9
LINC00240-203ENST00000606878 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
LINC00240-203ENST00000606878 MYO3BQ8WXR4 1341 aa20.64■□□□□ 0.89
LINC00240-203ENST00000606878 IL1R1P14778 569 aa20.64■□□□□ 0.89
LINC00240-203ENST00000606878 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.89
LINC00240-203ENST00000606878 DNAJC5GQ8N7S2 189 aa20.64■□□□□ 0.89
LINC00240-203ENST00000606878 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
LINC00240-203ENST00000606878 SPEF2Q9C093 1822 aa20.63■□□□□ 0.89
LINC00240-203ENST00000606878 SRGAP3O43295 1099 aa20.63■□□□□ 0.89
LINC00240-203ENST00000606878 CIAO1O76071 339 aa20.63■□□□□ 0.89
LINC00240-203ENST00000606878 MMP14P50281 582 aa20.63■□□□□ 0.89
LINC00240-203ENST00000606878 VPS37DQ86XT2 251 aa20.63■□□□□ 0.89
LINC00240-203ENST00000606878 FAM84BQ96KN1 310 aaPredicted RBP20.63■□□□□ 0.89
LINC00240-203ENST00000606878 MXD3Q9BW11 206 aa20.63■□□□□ 0.89
LINC00240-203ENST00000606878 CEP126Q9P2H0 1117 aa20.63■□□□□ 0.89
LINC00240-203ENST00000606878 SASH1O94885 1247 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 GYG1P46976 350 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 MTX1Q13505 466 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 KIF4BQ2VIQ3 1234 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 CAVIN4Q5BKX8 364 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 CDC37L1Q7L3B6 337 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 ITPRIPQ8IWB1 547 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 VGLL2Q8N8G2 317 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 SIL1Q9H173 461 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 COPRSQ9NQ92 184 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 CREBZFQ9NS37 354 aa20.62■□□□□ 0.89
LINC00240-203ENST00000606878 TMEM88BA6NKF7 163 aa20.61■□□□□ 0.89
LINC00240-203ENST00000606878 IFIT1P09914 478 aaKnown RBP20.61■□□□□ 0.89
LINC00240-203ENST00000606878 RLBP1P12271 317 aa20.61■□□□□ 0.89
LINC00240-203ENST00000606878 IL15P40933 162 aaPredicted RBP20.61■□□□□ 0.89
LINC00240-203ENST00000606878 PUM3Q15397 648 aaKnown RBP20.61■□□□□ 0.89
LINC00240-203ENST00000606878 ATG9AQ7Z3C6 839 aa20.61■□□□□ 0.89
LINC00240-203ENST00000606878 TDRD7Q8NHU6 1098 aaKnown RBP20.61■□□□□ 0.89
LINC00240-203ENST00000606878 SCN9AQ15858 1988 aa20.6■□□□□ 0.89
LINC00240-203ENST00000606878 ZBTB7BO15156 539 aaPredicted RBP20.6■□□□□ 0.89
LINC00240-203ENST00000606878 EGFRP00533 1210 aa20.6■□□□□ 0.89
LINC00240-203ENST00000606878 FBXO33Q7Z6M2 555 aa20.6■□□□□ 0.89
LINC00240-203ENST00000606878 DCPSQ96C86 337 aaKnown RBP20.6■□□□□ 0.89
LINC00240-203ENST00000606878 MYOZ2Q9NPC6 264 aa20.6■□□□□ 0.89
LINC00240-203ENST00000606878 HDAC9Q9UKV0 1011 aa20.6■□□□□ 0.89
LINC00240-203ENST00000606878 PA2G4Q9UQ80 394 aaKnown RBP20.6■□□□□ 0.89
LINC00240-203ENST00000606878 ZNF609O15014 1411 aa20.6■□□□□ 0.89
LINC00240-203ENST00000606878 SCARF1Q14162 830 aa20.59■□□□□ 0.89
LINC00240-203ENST00000606878 LPIN2Q92539 896 aa20.59■□□□□ 0.89
LINC00240-203ENST00000606878 GLIS2Q9BZE0 524 aaPredicted RBP20.59■□□□□ 0.89
LINC00240-203ENST00000606878 TRAF5O00463 557 aa20.58■□□□□ 0.89
LINC00240-203ENST00000606878 FRAT2O75474 233 aaPredicted RBP20.58■□□□□ 0.89
LINC00240-203ENST00000606878 SLC5A1P13866 664 aa20.58■□□□□ 0.89
LINC00240-203ENST00000606878 FGFR2P21802 821 aa20.58■□□□□ 0.89
LINC00240-203ENST00000606878 FKBP1AP62942 108 aaKnown RBP20.58■□□□□ 0.89
LINC00240-203ENST00000606878 USP48Q86UV5 1035 aa20.58■□□□□ 0.89
LINC00240-203ENST00000606878 KIAA0825Q8IV33 1275 aa20.58■□□□□ 0.89
LINC00240-203ENST00000606878 PANK1Q8TE04 598 aa20.58■□□□□ 0.89
LINC00240-203ENST00000606878 KLRG1Q96E93 195 aa20.58■□□□□ 0.89
LINC00240-203ENST00000606878 KRT26Q7Z3Y9 468 aa20.57■□□□□ 0.88
LINC00240-203ENST00000606878 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
LINC00240-203ENST00000606878 FAM205AQ6ZU69 1335 aa20.56■□□□□ 0.88
LINC00240-203ENST00000606878 BCAMP50895 628 aa20.56■□□□□ 0.88
LINC00240-203ENST00000606878 ATP8B2P98198 1209 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms