RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 RPS12P25398 132 aaKnown RBP16.03■□□□□ 0.16
SHROOM1-207ENST00000606676 PTPN12Q05209 780 aaKnown RBP16.03■□□□□ 0.16
SHROOM1-207ENST00000606676 USP50Q70EL3 339 aaPredicted RBP16.03■□□□□ 0.16
SHROOM1-207ENST00000606676 COA1Q9GZY4 146 aa16.03■□□□□ 0.16
SHROOM1-207ENST00000606676 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
SHROOM1-207ENST00000606676 MROH5Q6ZUA9 1318 aa16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 USP17L3A6NCW0 530 aa16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 USP17L4A6NCW7 530 aa16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 ITGBL1O95965 494 aaPredicted RBP16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 HIRAP54198 1017 aaPredicted RBP16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 RSBN1LQ6PCB5 846 aaPredicted RBP16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 USP17L1Q7RTZ2 530 aa16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 GMLQ99445 158 aa16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 HDAC5Q9UQL6 1122 aa16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
SHROOM1-207ENST00000606676 A0A1B0GUL6 1792 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 APLP1P51693 650 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 UBE4AQ14139 1066 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 DZIP1LQ8IYY4 767 aaKnown RBP16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 VGLL2Q8N8G2 317 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 CD209Q9NNX6 404 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 ZNF609O15014 1411 aa16.01■□□□□ 0.15
SHROOM1-207ENST00000606676 H7C1D1 291 aa16■□□□□ 0.15
SHROOM1-207ENST00000606676 DACT2Q5SW24 774 aa16■□□□□ 0.15
SHROOM1-207ENST00000606676 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
SHROOM1-207ENST00000606676 ATG9AQ7Z3C6 839 aa16■□□□□ 0.15
SHROOM1-207ENST00000606676 PCNTO95613 3336 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 EYA2O00167 538 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 EGFRP00533 1210 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 HTRA3P83110 453 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 MTX1Q13505 466 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 METTL24Q5JXM2 366 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 STRIP1Q5VSL9 837 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 SAMD7Q7Z3H4 446 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 FTSJ3Q8IY81 847 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 AGBL3Q8NEM8 1001 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 MXD3Q9BW11 206 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 PGAP2Q9UHJ9 254 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
SHROOM1-207ENST00000606676 PDE8BO95263 885 aa15.98■□□□□ 0.15
SHROOM1-207ENST00000606676 GNAI2P04899 355 aa15.98■□□□□ 0.15
SHROOM1-207ENST00000606676 IL1R1P14778 569 aa15.98■□□□□ 0.15
SHROOM1-207ENST00000606676 ZNF280AP59817 542 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-207ENST00000606676 TTLL5Q6EMB2 1281 aa15.98■□□□□ 0.15
SHROOM1-207ENST00000606676 FAM84BQ96KN1 310 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-207ENST00000606676 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-207ENST00000606676 ZBTB7BO15156 539 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 GYG1P46976 350 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 GTF2IP78347 998 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 TBC1D10BQ4KMP7 808 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 ZNF804AQ7Z570 1209 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 DNAJC5GQ8N7S2 189 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 PANK1Q8TE04 598 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 ZC3H15Q8WU90 426 aaKnown RBP15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 SIL1Q9H173 461 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 COPRSQ9NQ92 184 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 FBXO3Q9UK99 471 aa15.97■□□□□ 0.15
SHROOM1-207ENST00000606676 SRGAP3O43295 1099 aa15.96■□□□□ 0.15
SHROOM1-207ENST00000606676 CIAO1O76071 339 aa15.96■□□□□ 0.15
SHROOM1-207ENST00000606676 USP17L8P0C7I0 530 aa15.96■□□□□ 0.15
SHROOM1-207ENST00000606676 FGFR2P21802 821 aa15.96■□□□□ 0.15
SHROOM1-207ENST00000606676 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
SHROOM1-207ENST00000606676 ZNF646O15015 1829 aaPredicted RBP15.96■□□□□ 0.14
SHROOM1-207ENST00000606676 PSME4Q14997 1843 aa15.96■□□□□ 0.14
SHROOM1-207ENST00000606676 HIBADHP31937 336 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-207ENST00000606676 FMR1Q06787 632 aaKnown RBP eCLIP15.95■□□□□ 0.14
SHROOM1-207ENST00000606676 RBM26Q5T8P6 1007 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-207ENST00000606676 FBXO33Q7Z6M2 555 aa15.95■□□□□ 0.14
SHROOM1-207ENST00000606676 CERS5Q8N5B7 392 aa15.95■□□□□ 0.14
SHROOM1-207ENST00000606676 TDRD7Q8NHU6 1098 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-207ENST00000606676 FBXW7Q969H0 707 aa15.95■□□□□ 0.14
SHROOM1-207ENST00000606676 PNMA6EA0A0J9YXQ4 647 aa15.94■□□□□ 0.14
SHROOM1-207ENST00000606676 SASH1O94885 1247 aa15.94■□□□□ 0.14
SHROOM1-207ENST00000606676 PUM3Q15397 648 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-207ENST00000606676 MYO3BQ8WXR4 1341 aa15.94■□□□□ 0.14
SHROOM1-207ENST00000606676 TRAF5O00463 557 aa15.93■□□□□ 0.14
SHROOM1-207ENST00000606676 IL15P40933 162 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-207ENST00000606676 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
SHROOM1-207ENST00000606676 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
SHROOM1-207ENST00000606676 MYOZ2Q9NPC6 264 aa15.93■□□□□ 0.14
SHROOM1-207ENST00000606676 ASTN2O75129 1339 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-207ENST00000606676 MS4A1P11836 297 aa15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 BCAMP50895 628 aa15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 LPIN2Q92539 896 aa15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 GLIS2Q9BZE0 524 aaPredicted RBP15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 CREBZFQ9NS37 354 aa15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 CEP126Q9P2H0 1117 aa15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 JAG2Q9Y219 1238 aa15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 FAM205AQ6ZU69 1335 aa15.92■□□□□ 0.14
SHROOM1-207ENST00000606676 FKBP1AP62942 108 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-207ENST00000606676 ATP8B2P98198 1209 aa15.91■□□□□ 0.14
SHROOM1-207ENST00000606676 SCARF1Q14162 830 aa15.91■□□□□ 0.14
SHROOM1-207ENST00000606676 POLA2Q14181 598 aa15.91■□□□□ 0.14
SHROOM1-207ENST00000606676 CAVIN4Q5BKX8 364 aa15.91■□□□□ 0.14
SHROOM1-207ENST00000606676 DLK2Q6UY11 383 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms