RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 RGS19P49795 217 aa23.23■■□□□ 1.31
CCDC12-213ENST00000605875 EXOSC9Q06265 439 aaKnown RBP23.23■■□□□ 1.31
CCDC12-213ENST00000605875 MYOZ2Q9NPC6 264 aa23.23■■□□□ 1.31
CCDC12-213ENST00000605875 BSDC1Q9NW68 430 aaPredicted RBP23.23■■□□□ 1.31
CCDC12-213ENST00000605875 SAGE1Q9NXZ1 904 aa23.23■■□□□ 1.31
CCDC12-213ENST00000605875 SPEF2Q9C093 1822 aa23.23■■□□□ 1.31
CCDC12-213ENST00000605875 CACNA1FO60840 1977 aa23.22■■□□□ 1.31
CCDC12-213ENST00000605875 WTIPA6NIX2 430 aaPredicted RBP23.22■■□□□ 1.31
CCDC12-213ENST00000605875 SLC4A2P04920 1241 aa23.22■■□□□ 1.31
CCDC12-213ENST00000605875 SLC10A3P09131 477 aa23.22■■□□□ 1.31
CCDC12-213ENST00000605875 MLLT1Q03111 559 aaPredicted RBP23.22■■□□□ 1.31
CCDC12-213ENST00000605875 CWF19L2Q2TBE0 894 aaKnown RBP23.22■■□□□ 1.31
CCDC12-213ENST00000605875 GREM2Q9H772 168 aa23.22■■□□□ 1.31
CCDC12-213ENST00000605875 MINPP1Q9UNW1 487 aa23.22■■□□□ 1.31
CCDC12-213ENST00000605875 AKAP11Q9UKA4 1901 aa23.21■■□□□ 1.31
CCDC12-213ENST00000605875 FLIIQ13045 1269 aa23.21■■□□□ 1.31
CCDC12-213ENST00000605875 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
CCDC12-213ENST00000605875 RNF186Q9NXI6 227 aa23.21■■□□□ 1.31
CCDC12-213ENST00000605875 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
CCDC12-213ENST00000605875 NEURL1BA8MQ27 555 aa23.2■■□□□ 1.3
CCDC12-213ENST00000605875 TRPA1O75762 1119 aa23.2■■□□□ 1.3
CCDC12-213ENST00000605875 CCT4P50991 539 aaKnown RBP23.2■■□□□ 1.3
CCDC12-213ENST00000605875 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
CCDC12-213ENST00000605875 PITPNM2Q9BZ72 1349 aa23.19■■□□□ 1.3
CCDC12-213ENST00000605875 VAMP4O75379 141 aa23.19■■□□□ 1.3
CCDC12-213ENST00000605875 CSRNP1Q96S65 589 aa23.19■■□□□ 1.3
CCDC12-213ENST00000605875 H7C1W4 665 aa23.18■■□□□ 1.3
CCDC12-213ENST00000605875 FKBP1BP68106 108 aa23.18■■□□□ 1.3
CCDC12-213ENST00000605875 UBE3BQ7Z3V4 1068 aa23.18■■□□□ 1.3
CCDC12-213ENST00000605875 FBXW7Q969H0 707 aa23.18■■□□□ 1.3
CCDC12-213ENST00000605875 IGHMBP2P38935 993 aaKnown RBP23.17■■□□□ 1.3
CCDC12-213ENST00000605875 FKBP5Q13451 457 aaPredicted RBP23.17■■□□□ 1.3
CCDC12-213ENST00000605875 RASAL3Q86YV0 1011 aa23.17■■□□□ 1.3
CCDC12-213ENST00000605875 MXD3Q9BW11 206 aa23.17■■□□□ 1.3
CCDC12-213ENST00000605875 SCAF8Q9UPN6 1271 aaKnown RBP23.17■■□□□ 1.3
CCDC12-213ENST00000605875 PAPPA2Q9BXP8 1791 aa23.17■■□□□ 1.3
CCDC12-213ENST00000605875 NBPF9Q3BBW0 867 aa23.16■■□□□ 1.3
CCDC12-213ENST00000605875 DACT2Q5SW24 774 aa23.16■■□□□ 1.3
CCDC12-213ENST00000605875 REM2Q8IYK8 340 aaPredicted RBP23.16■■□□□ 1.3
CCDC12-213ENST00000605875 COA1Q9GZY4 146 aa23.16■■□□□ 1.3
CCDC12-213ENST00000605875 LEMD3Q9Y2U8 911 aa23.16■■□□□ 1.3
CCDC12-213ENST00000605875 STRIP1Q5VSL9 837 aa23.15■■□□□ 1.3
CCDC12-213ENST00000605875 OGFOD1Q8N543 542 aa23.15■■□□□ 1.3
CCDC12-213ENST00000605875 MYO3BQ8WXR4 1341 aa23.14■■□□□ 1.3
CCDC12-213ENST00000605875 GCKRQ14397 625 aa23.14■■□□□ 1.29
CCDC12-213ENST00000605875 PRAMEF18Q5VWM3 479 aa23.14■■□□□ 1.29
CCDC12-213ENST00000605875 MOB2Q70IA6 237 aa23.14■■□□□ 1.29
CCDC12-213ENST00000605875 TXNRD3Q86VQ6 643 aa23.14■■□□□ 1.29
CCDC12-213ENST00000605875 PLA2G12BQ9BX93 195 aa23.14■■□□□ 1.29
CCDC12-213ENST00000605875 ZNF646O15015 1829 aaPredicted RBP23.14■■□□□ 1.29
CCDC12-213ENST00000605875 ITGA6P23229 1130 aa23.13■■□□□ 1.29
CCDC12-213ENST00000605875 DNAAF4Q8WXU2 420 aa23.13■■□□□ 1.29
CCDC12-213ENST00000605875 ANKRD2Q9GZV1 360 aa23.13■■□□□ 1.29
CCDC12-213ENST00000605875 ZNF804BA4D1E1 1349 aa23.12■■□□□ 1.29
CCDC12-213ENST00000605875 UBE2Q2LH0YL09 131 aa23.12■■□□□ 1.29
CCDC12-213ENST00000605875 WNT10BO00744 389 aa23.12■■□□□ 1.29
CCDC12-213ENST00000605875 MPHOSPH8Q99549 860 aa23.12■■□□□ 1.29
CCDC12-213ENST00000605875 TTLL12Q14166 644 aaPredicted RBP23.11■■□□□ 1.29
CCDC12-213ENST00000605875 TTLL5Q6EMB2 1281 aa23.11■■□□□ 1.29
CCDC12-213ENST00000605875 CSF1RP07333 972 aa23.1■■□□□ 1.29
CCDC12-213ENST00000605875 KLRK1P26718 216 aa23.1■■□□□ 1.29
CCDC12-213ENST00000605875 MMP14P50281 582 aa23.1■■□□□ 1.29
CCDC12-213ENST00000605875 CASP7P55210 303 aa23.1■■□□□ 1.29
CCDC12-213ENST00000605875 SASH1O94885 1247 aa23.09■■□□□ 1.29
CCDC12-213ENST00000605875 NF2P35240 595 aa23.09■■□□□ 1.29
CCDC12-213ENST00000605875 LINS1Q8NG48 757 aa23.09■■□□□ 1.29
CCDC12-213ENST00000605875 F6X3S4 739 aa23.08■■□□□ 1.29
CCDC12-213ENST00000605875 CCER2I3L3R5 266 aa23.08■■□□□ 1.29
CCDC12-213ENST00000605875 KCNJ4P48050 445 aa23.08■■□□□ 1.29
CCDC12-213ENST00000605875 KIAA0825Q8IV33 1275 aa23.08■■□□□ 1.29
CCDC12-213ENST00000605875 HDAC9Q9UKV0 1011 aa23.08■■□□□ 1.29
CCDC12-213ENST00000605875 GTF2IP78347 998 aa23.07■■□□□ 1.28
CCDC12-213ENST00000605875 CHRNDQ07001 517 aa23.07■■□□□ 1.28
CCDC12-213ENST00000605875 CTU1Q7Z7A3 348 aaKnown RBP23.07■■□□□ 1.28
CCDC12-213ENST00000605875 ANKRD18BA2A2Z9 1011 aa23.06■■□□□ 1.28
CCDC12-213ENST00000605875 E9PSI1 815 aa23.06■■□□□ 1.28
CCDC12-213ENST00000605875 APOBEC3FQ8IUX4 373 aaKnown RBP23.05■■□□□ 1.28
CCDC12-213ENST00000605875 CD209Q9NNX6 404 aa23.05■■□□□ 1.28
CCDC12-213ENST00000605875 ARMC9Q7Z3E5 817 aa23.04■■□□□ 1.28
CCDC12-213ENST00000605875 TAF5LO75529 589 aa23.03■■□□□ 1.28
CCDC12-213ENST00000605875 TBC1D8O95759 1140 aa23.03■■□□□ 1.28
CCDC12-213ENST00000605875 TM4SF4P48230 202 aa23.03■■□□□ 1.28
CCDC12-213ENST00000605875 SOX10P56693 466 aa23.03■■□□□ 1.28
CCDC12-213ENST00000605875 MKRN3Q13064 507 aaKnown RBP23.03■■□□□ 1.28
CCDC12-213ENST00000605875 PRKG1Q13976 671 aa23.03■■□□□ 1.28
CCDC12-213ENST00000605875 ZBED3Q96IU2 234 aaPredicted RBP23.03■■□□□ 1.28
CCDC12-213ENST00000605875 SNAP23O00161 211 aa23.02■■□□□ 1.28
CCDC12-213ENST00000605875 PTPN12Q05209 780 aaKnown RBP23.02■■□□□ 1.28
CCDC12-213ENST00000605875 IFIT5Q13325 482 aaKnown RBP23.02■■□□□ 1.28
CCDC12-213ENST00000605875 BEND3Q5T5X7 828 aa23.02■■□□□ 1.28
CCDC12-213ENST00000605875 HELBQ8NG08 1087 aaPredicted RBP23.02■■□□□ 1.28
CCDC12-213ENST00000605875 SLC34A2O95436 690 aa23.01■■□□□ 1.27
CCDC12-213ENST00000605875 FOXO4P98177 505 aa23.01■■□□□ 1.27
CCDC12-213ENST00000605875 SLFN5Q08AF3 891 aa23.01■■□□□ 1.27
CCDC12-213ENST00000605875 ZNF296Q8WUU4 475 aaPredicted RBP23.01■■□□□ 1.27
CCDC12-213ENST00000605875 CDCA7LQ96GN5 454 aa23.01■■□□□ 1.27
CCDC12-213ENST00000605875 CHMP3Q9Y3E7 222 aa23.01■■□□□ 1.27
CCDC12-213ENST00000605875 DLGAP5Q15398 846 aa23■■□□□ 1.27
CCDC12-213ENST00000605875 C15orf52Q6ZUT6 534 aaKnown RBP23■■□□□ 1.27
CCDC12-213ENST00000605875 IRS2Q9Y4H2 1338 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms