RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 RBSNQ9H1K0 784 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 QTRT2Q9H974 415 aaKnown RBP5.51□□□□□ -1.53
SGMS1-207ENST00000602619 HOXD8P13378 290 aaPredicted RBP5.5□□□□□ -1.53
SGMS1-207ENST00000602619 IGFBP4P22692 258 aa5.5□□□□□ -1.53
SGMS1-207ENST00000602619 OCLNQ16625 522 aa5.5□□□□□ -1.53
SGMS1-207ENST00000602619 C11orf91Q3C1V1 193 aa5.5□□□□□ -1.53
SGMS1-207ENST00000602619 CBLL1Q75N03 491 aa5.5□□□□□ -1.53
SGMS1-207ENST00000602619 CMTR1Q8N1G2 835 aaKnown RBP5.5□□□□□ -1.53
SGMS1-207ENST00000602619 COL26A1Q96A83 441 aa5.5□□□□□ -1.53
SGMS1-207ENST00000602619 WDR64B1ANS9 1081 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 DDX3YO15523 660 aaKnown RBP5.49□□□□□ -1.53
SGMS1-207ENST00000602619 BMP3P12645 472 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 SOX18P35713 384 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 ADAMTSL4Q6UY14 1074 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 BEND4Q6ZU67 534 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 RETREG2Q8NC44 543 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 CARD10Q9BWT7 1032 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 KCNF1Q9H3M0 494 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 SLAIN2Q9P270 581 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 KCNMB2Q9Y691 235 aa5.49□□□□□ -1.53
SGMS1-207ENST00000602619 CDC25BP30305 580 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 COL19A1Q14993 1142 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 DUOXA2Q1HG44 320 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 NFXL1Q6ZNB6 911 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 RGL4Q8IZJ4 473 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 ASIC4Q96FT7 647 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 PIM2Q9P1W9 311 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 CCDC39Q9UFE4 941 aa5.48□□□□□ -1.53
SGMS1-207ENST00000602619 FOXO3O43524 673 aa5.47□□□□□ -1.53
SGMS1-207ENST00000602619 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.47□□□□□ -1.53
SGMS1-207ENST00000602619 FOXD4L4Q8WXT5 416 aaPredicted RBP5.47□□□□□ -1.53
SGMS1-207ENST00000602619 MFSD14AQ96MC6 490 aa5.47□□□□□ -1.53
SGMS1-207ENST00000602619 LACRTQ9GZZ8 138 aa5.47□□□□□ -1.53
SGMS1-207ENST00000602619 LRFN2Q9ULH4 789 aa5.47□□□□□ -1.53
SGMS1-207ENST00000602619 FSCN2O14926 492 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 ADAM11O75078 769 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 ITGB5P18084 799 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 ATP11AP98196 1134 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 PDE4CQ08493 712 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 MSMPQ1L6U9 139 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 COL13A1Q5TAT6 717 aaPredicted RBP5.46□□□□□ -1.54
SGMS1-207ENST00000602619 UBASH3BQ8TF42 649 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 MYO19Q96H55 970 aa5.46□□□□□ -1.54
SGMS1-207ENST00000602619 CXXC1Q9P0U4 656 aaPredicted RBP5.46□□□□□ -1.54
SGMS1-207ENST00000602619 ANGEL1Q9UNK9 670 aaKnown RBP5.46□□□□□ -1.54
SGMS1-207ENST00000602619 SART1O43290 800 aaKnown RBP5.45□□□□□ -1.54
SGMS1-207ENST00000602619 CDC27P30260 824 aa5.45□□□□□ -1.54
SGMS1-207ENST00000602619 PREPP48147 710 aa5.45□□□□□ -1.54
SGMS1-207ENST00000602619 CEP135Q66GS9 1140 aa5.45□□□□□ -1.54
SGMS1-207ENST00000602619 PHLDB3Q6NSJ2 640 aa5.45□□□□□ -1.54
SGMS1-207ENST00000602619 TREML1Q86YW5 311 aa5.45□□□□□ -1.54
SGMS1-207ENST00000602619 KLHL23Q8NBE8 558 aa5.45□□□□□ -1.54
SGMS1-207ENST00000602619 KLHDC7BQ96G42 594 aa5.45□□□□□ -1.54
SGMS1-207ENST00000602619 PRNPP04156 253 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 FOSL1P15407 271 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 SSFA2P28290 1259 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 FKBP5Q13451 457 aaPredicted RBP5.44□□□□□ -1.54
SGMS1-207ENST00000602619 FBLN7Q53RD9 439 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 NLRP13Q86W25 1043 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 SHISA5Q8N114 240 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 SH2B1Q9NRF2 756 aaPredicted RBP5.44□□□□□ -1.54
SGMS1-207ENST00000602619 LEMD3Q9Y2U8 911 aa5.44□□□□□ -1.54
SGMS1-207ENST00000602619 F13BP05160 661 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 JUNBP17275 347 aaPredicted RBP5.43□□□□□ -1.54
SGMS1-207ENST00000602619 ATP2B4P23634 1241 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 ANKRD34AQ69YU3 496 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 TP53INP2Q8IXH6 220 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 FBXL6Q8N531 539 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 OR13H1Q8NG92 308 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 FBXL18Q96ME1 805 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 TRAIPQ9BWF2 469 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 ATG3Q9NT62 314 aa5.43□□□□□ -1.54
SGMS1-207ENST00000602619 PRMT3O60678 531 aa5.42□□□□□ -1.54
SGMS1-207ENST00000602619 SMNDC1O75940 238 aaKnown RBP eCLIP5.42□□□□□ -1.54
SGMS1-207ENST00000602619 EPHA1P21709 976 aa5.42□□□□□ -1.54
SGMS1-207ENST00000602619 TRIP4Q15650 581 aaPredicted RBP5.42□□□□□ -1.54
SGMS1-207ENST00000602619 B4GALNT3Q6L9W6 998 aa5.42□□□□□ -1.54
SGMS1-207ENST00000602619 RASSF4Q9H2L5 321 aa5.42□□□□□ -1.54
SGMS1-207ENST00000602619 SEC31BQ9NQW1 1179 aa5.42□□□□□ -1.54
SGMS1-207ENST00000602619 HIF3AQ9Y2N7 669 aa5.42□□□□□ -1.54
SGMS1-207ENST00000602619 MAP4P27816 1152 aaKnown RBP5.41□□□□□ -1.54
SGMS1-207ENST00000602619 HYAL2Q12891 473 aa5.41□□□□□ -1.54
SGMS1-207ENST00000602619 ZNF648Q5T619 568 aaPredicted RBP5.41□□□□□ -1.54
SGMS1-207ENST00000602619 FAM117BQ6P1L5 589 aa5.41□□□□□ -1.54
SGMS1-207ENST00000602619 GIMAP7Q8NHV1 300 aa5.41□□□□□ -1.54
SGMS1-207ENST00000602619 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 ZNF124Q15973 351 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 SGO2Q562F6 1265 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 COX20Q5RI15 118 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 SPOCD1Q6ZMY3 1216 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 VSIG10LQ86VR7 867 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 VTI1AQ96AJ9 217 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 SPACA7Q96KW9 195 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 PRIMPOLQ96LW4 560 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 OSBPL1AQ9BXW6 950 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 RNF208Q9H0X6 261 aa5.4□□□□□ -1.54
SGMS1-207ENST00000602619 CARNS1A5YM72 827 aa5.39□□□□□ -1.55
SGMS1-207ENST00000602619 BRD1O95696 1058 aa5.39□□□□□ -1.55
SGMS1-207ENST00000602619 ETFBKMTQ8IXQ9 262 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms