RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
ZNF548-212ENST00000602086 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
ZNF548-212ENST00000602086 AKAP11Q9UKA4 1901 aa17.45■□□□□ 0.38
ZNF548-212ENST00000602086 ADORA1P30542 326 aa17.44■□□□□ 0.38
ZNF548-212ENST00000602086 PDE6BP35913 854 aa17.44■□□□□ 0.38
ZNF548-212ENST00000602086 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
ZNF548-212ENST00000602086 SNRKQ9NRH2 765 aa17.44■□□□□ 0.38
ZNF548-212ENST00000602086 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
ZNF548-212ENST00000602086 RAD50Q92878 1312 aa17.44■□□□□ 0.38
ZNF548-212ENST00000602086 CCDC24Q8N4L8 307 aa17.43■□□□□ 0.38
ZNF548-212ENST00000602086 KBTBD3Q8NAB2 608 aa17.43■□□□□ 0.38
ZNF548-212ENST00000602086 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
ZNF548-212ENST00000602086 SGSM2O43147 1006 aa17.42■□□□□ 0.38
ZNF548-212ENST00000602086 MAP4K4O95819 1239 aaPredicted RBP17.42■□□□□ 0.38
ZNF548-212ENST00000602086 LRRFIP1Q32MZ4 808 aaKnown RBP17.42■□□□□ 0.38
ZNF548-212ENST00000602086 CCDC102BQ68D86 513 aa17.42■□□□□ 0.38
ZNF548-212ENST00000602086 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
ZNF548-212ENST00000602086 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
ZNF548-212ENST00000602086 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
ZNF548-212ENST00000602086 PAG1Q9NWQ8 432 aa17.42■□□□□ 0.38
ZNF548-212ENST00000602086 WWC3Q9ULE0 1092 aa17.42■□□□□ 0.38
ZNF548-212ENST00000602086 TAF5LO75529 589 aa17.41■□□□□ 0.38
ZNF548-212ENST00000602086 NPR1P16066 1061 aa17.41■□□□□ 0.38
ZNF548-212ENST00000602086 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
ZNF548-212ENST00000602086 LEMD3Q9Y2U8 911 aa17.41■□□□□ 0.38
ZNF548-212ENST00000602086 ZNF804BA4D1E1 1349 aa17.41■□□□□ 0.38
ZNF548-212ENST00000602086 SRGNP10124 158 aa17.4■□□□□ 0.38
ZNF548-212ENST00000602086 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
ZNF548-212ENST00000602086 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
ZNF548-212ENST00000602086 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
ZNF548-212ENST00000602086 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
ZNF548-212ENST00000602086 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
ZNF548-212ENST00000602086 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
ZNF548-212ENST00000602086 DNAJC2Q99543 621 aaKnown RBP17.39■□□□□ 0.37
ZNF548-212ENST00000602086 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
ZNF548-212ENST00000602086 XDHP47989 1333 aa17.39■□□□□ 0.37
ZNF548-212ENST00000602086 PDS5AQ29RF7 1337 aaKnown RBP17.39■□□□□ 0.37
ZNF548-212ENST00000602086 SEMA3EO15041 775 aa17.38■□□□□ 0.37
ZNF548-212ENST00000602086 IGSF3O75054 1194 aa17.38■□□□□ 0.37
ZNF548-212ENST00000602086 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
ZNF548-212ENST00000602086 MCAMP43121 646 aa17.38■□□□□ 0.37
ZNF548-212ENST00000602086 PHKA1P46020 1223 aa17.38■□□□□ 0.37
ZNF548-212ENST00000602086 IL17RAQ96F46 866 aa17.38■□□□□ 0.37
ZNF548-212ENST00000602086 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
ZNF548-212ENST00000602086 MYH7P12883 1935 aa17.38■□□□□ 0.37
ZNF548-212ENST00000602086 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
ZNF548-212ENST00000602086 GOLIM4O00461 696 aa17.37■□□□□ 0.37
ZNF548-212ENST00000602086 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
ZNF548-212ENST00000602086 STYK1Q6J9G0 422 aa17.37■□□□□ 0.37
ZNF548-212ENST00000602086 FBXO33Q7Z6M2 555 aa17.37■□□□□ 0.37
ZNF548-212ENST00000602086 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
ZNF548-212ENST00000602086 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
ZNF548-212ENST00000602086 DOCK2Q92608 1830 aa17.37■□□□□ 0.37
ZNF548-212ENST00000602086 LTBP1Q14766 1721 aa17.36■□□□□ 0.37
ZNF548-212ENST00000602086 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
ZNF548-212ENST00000602086 SCARF1Q14162 830 aa17.36■□□□□ 0.37
ZNF548-212ENST00000602086 ZSCAN25Q6NSZ9 544 aa17.36■□□□□ 0.37
ZNF548-212ENST00000602086 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
ZNF548-212ENST00000602086 ZNF526Q8TF50 670 aaPredicted RBP17.36■□□□□ 0.37
ZNF548-212ENST00000602086 EDC3Q96F86 508 aaKnown RBP17.36■□□□□ 0.37
ZNF548-212ENST00000602086 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
ZNF548-212ENST00000602086 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
ZNF548-212ENST00000602086 C10orf71Q711Q0 1435 aa17.36■□□□□ 0.37
ZNF548-212ENST00000602086 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 MCCP23508 829 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 ZAP70P43403 619 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 KCNJ4P48050 445 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 ANAPC15P60006 121 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
ZNF548-212ENST00000602086 NMIQ13287 307 aaPredicted RBP17.35■□□□□ 0.37
ZNF548-212ENST00000602086 KIAA1211Q6ZU35 1233 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 SPATA5Q8NB90 893 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 FAM84BQ96KN1 310 aaPredicted RBP17.35■□□□□ 0.37
ZNF548-212ENST00000602086 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
ZNF548-212ENST00000602086 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.35■□□□□ 0.37
ZNF548-212ENST00000602086 HMG20BQ9P0W2 317 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
ZNF548-212ENST00000602086 H0YIN7 160 aa17.34■□□□□ 0.37
ZNF548-212ENST00000602086 SNAP23O00161 211 aa17.34■□□□□ 0.37
ZNF548-212ENST00000602086 RNF113AO15541 343 aaKnown RBP17.34■□□□□ 0.37
ZNF548-212ENST00000602086 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
ZNF548-212ENST00000602086 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
ZNF548-212ENST00000602086 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
ZNF548-212ENST00000602086 TMED8Q6PL24 325 aaPredicted RBP17.34■□□□□ 0.37
ZNF548-212ENST00000602086 LSG1Q9H089 658 aaKnown RBP17.34■□□□□ 0.37
ZNF548-212ENST00000602086 ANO2Q9NQ90 1003 aa17.34■□□□□ 0.37
ZNF548-212ENST00000602086 DENND2AQ9ULE3 1009 aa17.34■□□□□ 0.37
ZNF548-212ENST00000602086 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
ZNF548-212ENST00000602086 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
ZNF548-212ENST00000602086 BCAMP50895 628 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 RASGRF1Q13972 1273 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 IL25Q9H293 177 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 ANKIB1Q9P2G1 1089 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.36
ZNF548-212ENST00000602086 MYH13Q9UKX3 1938 aa17.32■□□□□ 0.36
ZNF548-212ENST00000602086 A0A0D9SFI3 127 aa17.32■□□□□ 0.36
ZNF548-212ENST00000602086 HIBADHP31937 336 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms