RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 IGHMBP2P38935 993 aaKnown RBP22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 SCARF1Q14162 830 aa22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 OGFOD1Q8N543 542 aa22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 PLA2G12BQ9BX93 195 aa22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 ANKRD2Q9GZV1 360 aa22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 MYH16Q9H6N6 1097 aa22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 MYOZ2Q9NPC6 264 aa22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 MED23Q9ULK4 1368 aa22.79■■□□□ 1.24
SHKBP1-227ENST00000602011 CDCA5Q96FF9 252 aa22.79■■□□□ 1.24
SHKBP1-227ENST00000602011 COA1Q9GZY4 146 aa22.79■■□□□ 1.24
SHKBP1-227ENST00000602011 RNF186Q9NXI6 227 aa22.79■■□□□ 1.24
SHKBP1-227ENST00000602011 CCT4P50991 539 aaKnown RBP22.78■■□□□ 1.24
SHKBP1-227ENST00000602011 STRIP1Q5VSL9 837 aa22.78■■□□□ 1.24
SHKBP1-227ENST00000602011 TSR2Q969E8 191 aaKnown RBP22.78■■□□□ 1.24
SHKBP1-227ENST00000602011 GREM2Q9H772 168 aa22.78■■□□□ 1.24
SHKBP1-227ENST00000602011 WTIPA6NIX2 430 aaPredicted RBP22.77■■□□□ 1.24
SHKBP1-227ENST00000602011 SLC10A3P09131 477 aa22.77■■□□□ 1.24
SHKBP1-227ENST00000602011 ANGEL2Q5VTE6 544 aaKnown RBP22.77■■□□□ 1.24
SHKBP1-227ENST00000602011 TNRC18O15417 2968 aaPredicted RBP22.77■■□□□ 1.23
SHKBP1-227ENST00000602011 SOX10P56693 466 aa22.76■■□□□ 1.23
SHKBP1-227ENST00000602011 GCKRQ14397 625 aa22.76■■□□□ 1.23
SHKBP1-227ENST00000602011 WDR63Q8IWG1 891 aa22.76■■□□□ 1.23
SHKBP1-227ENST00000602011 LINS1Q8NG48 757 aa22.76■■□□□ 1.23
SHKBP1-227ENST00000602011 CSRNP1Q96S65 589 aa22.76■■□□□ 1.23
SHKBP1-227ENST00000602011 MPHOSPH8Q99549 860 aa22.76■■□□□ 1.23
SHKBP1-227ENST00000602011 CSF1RP07333 972 aa22.75■■□□□ 1.23
SHKBP1-227ENST00000602011 FLIIQ13045 1269 aa22.75■■□□□ 1.23
SHKBP1-227ENST00000602011 CWF19L2Q2TBE0 894 aaKnown RBP22.75■■□□□ 1.23
SHKBP1-227ENST00000602011 MOB2Q70IA6 237 aa22.75■■□□□ 1.23
SHKBP1-227ENST00000602011 UBE3BQ7Z3V4 1068 aa22.75■■□□□ 1.23
SHKBP1-227ENST00000602011 DACT2Q5SW24 774 aa22.74■■□□□ 1.23
SHKBP1-227ENST00000602011 RASAL3Q86YV0 1011 aa22.74■■□□□ 1.23
SHKBP1-227ENST00000602011 DNAAF4Q8WXU2 420 aa22.74■■□□□ 1.23
SHKBP1-227ENST00000602011 FKBP5Q13451 457 aaPredicted RBP22.73■■□□□ 1.23
SHKBP1-227ENST00000602011 PRAMEF18Q5VWM3 479 aa22.73■■□□□ 1.23
SHKBP1-227ENST00000602011 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
SHKBP1-227ENST00000602011 ITGA6P23229 1130 aa22.72■■□□□ 1.23
SHKBP1-227ENST00000602011 G2E3Q7L622 706 aa22.72■■□□□ 1.23
SHKBP1-227ENST00000602011 MXD3Q9BW11 206 aa22.72■■□□□ 1.23
SHKBP1-227ENST00000602011 HDAC9Q9UKV0 1011 aa22.72■■□□□ 1.23
SHKBP1-227ENST00000602011 ZNF804BA4D1E1 1349 aa22.72■■□□□ 1.23
SHKBP1-227ENST00000602011 NF2P35240 595 aa22.71■■□□□ 1.23
SHKBP1-227ENST00000602011 TTLL5Q6EMB2 1281 aa22.71■■□□□ 1.23
SHKBP1-227ENST00000602011 PSME4Q14997 1843 aa22.69■■□□□ 1.22
SHKBP1-227ENST00000602011 ANKRD18BA2A2Z9 1011 aa22.69■■□□□ 1.22
SHKBP1-227ENST00000602011 VAMP4O75379 141 aa22.69■■□□□ 1.22
SHKBP1-227ENST00000602011 CASP7P55210 303 aa22.69■■□□□ 1.22
SHKBP1-227ENST00000602011 CCDC184Q52MB2 194 aa22.69■■□□□ 1.22
SHKBP1-227ENST00000602011 MRS2Q9HD23 443 aa22.69■■□□□ 1.22
SHKBP1-227ENST00000602011 PDE4DIPQ5VU43 2346 aa22.68■■□□□ 1.22
SHKBP1-227ENST00000602011 UBE2Q2LH0YL09 131 aa22.68■■□□□ 1.22
SHKBP1-227ENST00000602011 WNT10BO00744 389 aa22.68■■□□□ 1.22
SHKBP1-227ENST00000602011 ANP32CO43423 234 aa22.68■■□□□ 1.22
SHKBP1-227ENST00000602011 KCNJ4P48050 445 aa22.68■■□□□ 1.22
SHKBP1-227ENST00000602011 C15orf52Q6ZUT6 534 aaKnown RBP22.68■■□□□ 1.22
SHKBP1-227ENST00000602011 FANCIQ9NVI1 1328 aa22.67■■□□□ 1.22
SHKBP1-227ENST00000602011 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
SHKBP1-227ENST00000602011 NBPF9Q3BBW0 867 aa22.67■■□□□ 1.22
SHKBP1-227ENST00000602011 SPEF2Q9C093 1822 aa22.66■■□□□ 1.22
SHKBP1-227ENST00000602011 PAPPA2Q9BXP8 1791 aa22.66■■□□□ 1.22
SHKBP1-227ENST00000602011 IFIT5Q13325 482 aaKnown RBP22.66■■□□□ 1.22
SHKBP1-227ENST00000602011 CTU1Q7Z7A3 348 aaKnown RBP22.66■■□□□ 1.22
SHKBP1-227ENST00000602011 APOBEC3FQ8IUX4 373 aaKnown RBP22.66■■□□□ 1.22
SHKBP1-227ENST00000602011 FBXW7Q969H0 707 aa22.66■■□□□ 1.22
SHKBP1-227ENST00000602011 CHRNDQ07001 517 aa22.65■■□□□ 1.22
SHKBP1-227ENST00000602011 MKRN3Q13064 507 aaKnown RBP22.65■■□□□ 1.22
SHKBP1-227ENST00000602011 TBC1D8O95759 1140 aa22.64■■□□□ 1.21
SHKBP1-227ENST00000602011 TXNRD3Q86VQ6 643 aa22.64■■□□□ 1.21
SHKBP1-227ENST00000602011 CD209Q9NNX6 404 aa22.64■■□□□ 1.21
SHKBP1-227ENST00000602011 FKBP1AP62942 108 aaKnown RBP22.63■■□□□ 1.21
SHKBP1-227ENST00000602011 GTF2IP78347 998 aa22.63■■□□□ 1.21
SHKBP1-227ENST00000602011 ARMC9Q7Z3E5 817 aa22.63■■□□□ 1.21
SHKBP1-227ENST00000602011 CACNA1FO60840 1977 aa22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 UNCXA6NJT0 531 aa22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 SASH1O94885 1247 aa22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 TM4SF4P48230 202 aa22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 TTLL12Q14166 644 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 PKN2Q16513 984 aaKnown RBP22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 NOM1Q5C9Z4 860 aaKnown RBP22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 BEND3Q5T5X7 828 aa22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 MTMR14Q8NCE2 650 aa22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 MYH3P11055 1940 aa22.62■■□□□ 1.21
SHKBP1-227ENST00000602011 ZNF646O15015 1829 aaPredicted RBP22.61■■□□□ 1.21
SHKBP1-227ENST00000602011 KLRK1P26718 216 aa22.61■■□□□ 1.21
SHKBP1-227ENST00000602011 PRKG1Q13976 671 aa22.61■■□□□ 1.21
SHKBP1-227ENST00000602011 CCDC57Q2TAC2 916 aa22.61■■□□□ 1.21
SHKBP1-227ENST00000602011 ZNF804AQ7Z570 1209 aa22.61■■□□□ 1.21
SHKBP1-227ENST00000602011 ZBED3Q96IU2 234 aaPredicted RBP22.61■■□□□ 1.21
SHKBP1-227ENST00000602011 HPS5Q9UPZ3 1129 aa22.61■■□□□ 1.21
SHKBP1-227ENST00000602011 FOXO4P98177 505 aa22.6■■□□□ 1.21
SHKBP1-227ENST00000602011 SREBF2Q12772 1141 aa22.6■■□□□ 1.21
SHKBP1-227ENST00000602011 DLGAP5Q15398 846 aa22.6■■□□□ 1.21
SHKBP1-227ENST00000602011 KIAA0825Q8IV33 1275 aa22.6■■□□□ 1.21
SHKBP1-227ENST00000602011 ZNF296Q8WUU4 475 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-227ENST00000602011 PPP2R3BQ9Y5P8 575 aa22.6■■□□□ 1.21
SHKBP1-227ENST00000602011 MYO1BO43795 1136 aa22.59■■□□□ 1.21
SHKBP1-227ENST00000602011 ALDH1L1O75891 902 aa22.59■■□□□ 1.21
SHKBP1-227ENST00000602011 IL1R1P14778 569 aa22.59■■□□□ 1.21
SHKBP1-227ENST00000602011 INHBEP58166 350 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms