RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TAF5LO75529 589 aa12.4□□□□□ -0.42
UPF1-213ENST00000601981 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
UPF1-213ENST00000601981 RGS3P49796 1198 aa12.4□□□□□ -0.42
UPF1-213ENST00000601981 AOC3Q16853 763 aa12.4□□□□□ -0.42
UPF1-213ENST00000601981 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
UPF1-213ENST00000601981 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
UPF1-213ENST00000601981 POLLQ9UGP5 575 aa12.4□□□□□ -0.42
UPF1-213ENST00000601981 AKAP2Q9Y2D5 859 aa12.4□□□□□ -0.42
UPF1-213ENST00000601981 PSME4Q14997 1843 aa12.39□□□□□ -0.43
UPF1-213ENST00000601981 SLC5A1P13866 664 aa12.39□□□□□ -0.43
UPF1-213ENST00000601981 NUCB1Q02818 461 aa12.39□□□□□ -0.43
UPF1-213ENST00000601981 ATG9AQ7Z3C6 839 aa12.39□□□□□ -0.43
UPF1-213ENST00000601981 ZNF804AQ7Z570 1209 aa12.39□□□□□ -0.43
UPF1-213ENST00000601981 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
UPF1-213ENST00000601981 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 PDE4AP27815 886 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 EIF6P56537 245 aaKnown RBP12.38□□□□□ -0.43
UPF1-213ENST00000601981 ATP2B3Q16720 1220 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 CAVIN4Q5BKX8 364 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 C15orf52Q6ZUT6 534 aaKnown RBP12.38□□□□□ -0.43
UPF1-213ENST00000601981 SLC51AQ86UW1 340 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 VPS37DQ86XT2 251 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 LPIN2Q92539 896 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
UPF1-213ENST00000601981 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
UPF1-213ENST00000601981 VGLL2Q8N8G2 317 aa12.37□□□□□ -0.43
UPF1-213ENST00000601981 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
UPF1-213ENST00000601981 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
UPF1-213ENST00000601981 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
UPF1-213ENST00000601981 EXOC6BQ9Y2D4 811 aa12.37□□□□□ -0.43
UPF1-213ENST00000601981 ECE2O60344 883 aa12.36□□□□□ -0.43
UPF1-213ENST00000601981 TFCP2Q12800 502 aa12.36□□□□□ -0.43
UPF1-213ENST00000601981 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
UPF1-213ENST00000601981 CHD1LQ86WJ1 897 aa12.36□□□□□ -0.43
UPF1-213ENST00000601981 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
UPF1-213ENST00000601981 GPR101Q96P66 508 aaPredicted RBP12.36□□□□□ -0.43
UPF1-213ENST00000601981 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
UPF1-213ENST00000601981 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
UPF1-213ENST00000601981 FZD9O00144 591 aa12.35□□□□□ -0.43
UPF1-213ENST00000601981 TNIP1Q15025 636 aa12.35□□□□□ -0.43
UPF1-213ENST00000601981 GORABQ5T7V8 394 aa12.35□□□□□ -0.43
UPF1-213ENST00000601981 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
UPF1-213ENST00000601981 DBNDD1Q9H9R9 158 aa12.35□□□□□ -0.43
UPF1-213ENST00000601981 ZNF609O15014 1411 aa12.35□□□□□ -0.43
UPF1-213ENST00000601981 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 APBB1O00213 710 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 FRAT2O75474 233 aaPredicted RBP12.34□□□□□ -0.43
UPF1-213ENST00000601981 SASH1O94885 1247 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 FGFR2P21802 821 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 HIBADHP31937 336 aaKnown RBP12.34□□□□□ -0.43
UPF1-213ENST00000601981 PRELPP51888 382 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 DOK7Q18PE1 504 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 CIAPIN1Q6FI81 312 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 RHPN1Q8TCX5 695 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 NEUROD6Q96NK8 337 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 LRRCC1Q9C099 1032 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 SCN4AP35499 1836 aa12.34□□□□□ -0.43
UPF1-213ENST00000601981 COL4A5P29400 1685 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 SNAP23O00161 211 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 TNNI3KQ59H18 835 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 GPC2Q8N158 579 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 CD209Q9NNX6 404 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 FPGT-TNNI3KV9GXZ4 949 aa12.33□□□□□ -0.44
UPF1-213ENST00000601981 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 KLRK1P26718 216 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 GYG1P46976 350 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 TXNRD3Q86VQ6 643 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 FBXW7Q969H0 707 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 FAM84BQ96KN1 310 aaPredicted RBP12.32□□□□□ -0.44
UPF1-213ENST00000601981 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 GJA3Q9Y6H8 435 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 MYO3BQ8WXR4 1341 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 IRS2Q9Y4H2 1338 aa12.32□□□□□ -0.44
UPF1-213ENST00000601981 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
UPF1-213ENST00000601981 SEMA3EO15041 775 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 RAD17O75943 681 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
UPF1-213ENST00000601981 IL1R1P14778 569 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
UPF1-213ENST00000601981 TIMM10P62072 90 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 CXCL9Q07325 125 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 AACSQ86V21 672 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 XAGE2Q96GT9 111 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 GPBP1L1Q9HC44 474 aaPredicted RBP12.31□□□□□ -0.44
UPF1-213ENST00000601981 ZNF541Q9H0D2 1346 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
UPF1-213ENST00000601981 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
UPF1-213ENST00000601981 YDJCA8MPS7 323 aa12.3□□□□□ -0.44
UPF1-213ENST00000601981 UQCRFS1P1P0C7P4 283 aa12.3□□□□□ -0.44
UPF1-213ENST00000601981 RPS12P25398 132 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 737.6 ms