RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 POLA2Q14181 598 aa17.9■□□□□ 0.46
USE1-210ENST00000601662 TNIP1Q15025 636 aa17.9■□□□□ 0.46
USE1-210ENST00000601662 ANKRD2Q9GZV1 360 aa17.9■□□□□ 0.46
USE1-210ENST00000601662 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
USE1-210ENST00000601662 KCNQ5Q9NR82 932 aa17.9■□□□□ 0.46
USE1-210ENST00000601662 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 EPHX2P34913 555 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 GMPSP49915 693 aaPredicted RBP17.89■□□□□ 0.45
USE1-210ENST00000601662 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
USE1-210ENST00000601662 SMC1BQ8NDV3 1235 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 GCC1Q96CN9 775 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 CLEC11AQ9Y240 323 aa17.89■□□□□ 0.45
USE1-210ENST00000601662 SNAP23O00161 211 aa17.88■□□□□ 0.45
USE1-210ENST00000601662 IGHDP01880 384 aa17.88■□□□□ 0.45
USE1-210ENST00000601662 EPS15P42566 896 aa17.88■□□□□ 0.45
USE1-210ENST00000601662 B4GALNT3Q6L9W6 998 aa17.88■□□□□ 0.45
USE1-210ENST00000601662 PUS3Q9BZE2 481 aaKnown RBP17.88■□□□□ 0.45
USE1-210ENST00000601662 DCTPP1Q9H773 170 aa17.88■□□□□ 0.45
USE1-210ENST00000601662 LEMD3Q9Y2U8 911 aa17.88■□□□□ 0.45
USE1-210ENST00000601662 PSMD14O00487 310 aa17.87■□□□□ 0.45
USE1-210ENST00000601662 SCNN1DP51172 638 aa17.87■□□□□ 0.45
USE1-210ENST00000601662 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
USE1-210ENST00000601662 ZNF804BA4D1E1 1349 aa17.87■□□□□ 0.45
USE1-210ENST00000601662 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
USE1-210ENST00000601662 KLRK1P26718 216 aa17.86■□□□□ 0.45
USE1-210ENST00000601662 FSTL1Q12841 308 aa17.86■□□□□ 0.45
USE1-210ENST00000601662 TXNRD3Q86VQ6 643 aa17.86■□□□□ 0.45
USE1-210ENST00000601662 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
USE1-210ENST00000601662 COPRSQ9NQ92 184 aa17.86■□□□□ 0.45
USE1-210ENST00000601662 FBXO3Q9UK99 471 aa17.86■□□□□ 0.45
USE1-210ENST00000601662 NOP58Q9Y2X3 529 aaKnown RBP17.86■□□□□ 0.45
USE1-210ENST00000601662 RAB11FIP3O75154 756 aa17.85■□□□□ 0.45
USE1-210ENST00000601662 SURF6O75683 361 aaKnown RBP17.85■□□□□ 0.45
USE1-210ENST00000601662 HSPA6P17066 643 aa17.85■□□□□ 0.45
USE1-210ENST00000601662 GPRC5DQ9NZD1 345 aa17.85■□□□□ 0.45
USE1-210ENST00000601662 RFX5P48382 616 aaPredicted RBP17.84■□□□□ 0.45
USE1-210ENST00000601662 G3BP1Q13283 466 aaKnown RBP eCLIP17.84■□□□□ 0.45
USE1-210ENST00000601662 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
USE1-210ENST00000601662 SMC5Q8IY18 1101 aa17.84■□□□□ 0.45
USE1-210ENST00000601662 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
USE1-210ENST00000601662 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
USE1-210ENST00000601662 CNOT7Q9UIV1 285 aaKnown RBP17.84■□□□□ 0.45
USE1-210ENST00000601662 SCN4AP35499 1836 aa17.84■□□□□ 0.45
USE1-210ENST00000601662 MED23Q9ULK4 1368 aa17.83■□□□□ 0.45
USE1-210ENST00000601662 SHTN1A0MZ66 631 aa17.83■□□□□ 0.44
USE1-210ENST00000601662 PTPN12Q05209 780 aaKnown RBP17.83■□□□□ 0.44
USE1-210ENST00000601662 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
USE1-210ENST00000601662 PNMA8AQ86V59 439 aaPredicted RBP17.83■□□□□ 0.44
USE1-210ENST00000601662 LDHDQ86WU2 507 aa17.83■□□□□ 0.44
USE1-210ENST00000601662 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.44
USE1-210ENST00000601662 CIAO1O76071 339 aa17.82■□□□□ 0.44
USE1-210ENST00000601662 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
USE1-210ENST00000601662 METTL24Q5JXM2 366 aa17.82■□□□□ 0.44
USE1-210ENST00000601662 PODNQ7Z5L7 613 aa17.82■□□□□ 0.44
USE1-210ENST00000601662 RIPOR2Q9Y4F9 1068 aa17.82■□□□□ 0.44
USE1-210ENST00000601662 H7C1D1 291 aa17.81■□□□□ 0.44
USE1-210ENST00000601662 RBM26Q5T8P6 1007 aaKnown RBP17.81■□□□□ 0.44
USE1-210ENST00000601662 MAP1SQ66K74 1059 aaPredicted RBP17.81■□□□□ 0.44
USE1-210ENST00000601662 MICALL2Q8IY33 904 aa17.81■□□□□ 0.44
USE1-210ENST00000601662 COA1Q9GZY4 146 aa17.81■□□□□ 0.44
USE1-210ENST00000601662 ADARB2Q9NS39 739 aaKnown RBP17.81■□□□□ 0.44
USE1-210ENST00000601662 USP17L3A6NCW0 530 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 USP17L4A6NCW7 530 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 EYA2O00167 538 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 VIL1P09327 827 aaKnown RBP17.8■□□□□ 0.44
USE1-210ENST00000601662 IL15P40933 162 aaPredicted RBP17.8■□□□□ 0.44
USE1-210ENST00000601662 HTRA3P83110 453 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 USP50Q70EL3 339 aaPredicted RBP17.8■□□□□ 0.44
USE1-210ENST00000601662 USP17L1Q7RTZ2 530 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 SIL1Q9H173 461 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
USE1-210ENST00000601662 EXOC6BQ9Y2D4 811 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 SCN9AQ15858 1988 aa17.8■□□□□ 0.44
USE1-210ENST00000601662 MROH5Q6ZUA9 1318 aa17.79■□□□□ 0.44
USE1-210ENST00000601662 RSBN1LQ6PCB5 846 aaPredicted RBP17.79■□□□□ 0.44
USE1-210ENST00000601662 SAMD7Q7Z3H4 446 aa17.79■□□□□ 0.44
USE1-210ENST00000601662 DPF2Q92785 391 aa17.79■□□□□ 0.44
USE1-210ENST00000601662 KIF1BPQ96EK5 621 aa17.79■□□□□ 0.44
USE1-210ENST00000601662 MXD3Q9BW11 206 aa17.79■□□□□ 0.44
USE1-210ENST00000601662 RPS12P25398 132 aaKnown RBP17.78■□□□□ 0.44
USE1-210ENST00000601662 TBC1D10BQ4KMP7 808 aaPredicted RBP17.78■□□□□ 0.44
USE1-210ENST00000601662 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
USE1-210ENST00000601662 CNTROBQ8N137 903 aa17.78■□□□□ 0.44
USE1-210ENST00000601662 TRPM4Q8TD43 1214 aa17.78■□□□□ 0.44
USE1-210ENST00000601662 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
USE1-210ENST00000601662 CD209Q9NNX6 404 aa17.78■□□□□ 0.44
USE1-210ENST00000601662 APLP1P51693 650 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 GTF2IP78347 998 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 NUCB1Q02818 461 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 UBE4AQ14139 1066 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 TTLL5Q6EMB2 1281 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 ZNF804AQ7Z570 1209 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
USE1-210ENST00000601662 GYG1P46976 350 aa17.76■□□□□ 0.43
USE1-210ENST00000601662 HIRAP54198 1017 aaPredicted RBP17.76■□□□□ 0.43
USE1-210ENST00000601662 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms