RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 BCS1LQ9Y276 419 aa11.14□□□□□ -0.63
LINC00343-209ENST00000601607 LRRC9Q6ZRR7 1453 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 TGFBR3LH3BV60 316 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 MSTNO14793 375 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 GRIN2CQ14957 1233 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 PLA2G4EQ3MJ16 856 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 CAPN12Q6ZSI9 719 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 PRR12Q9ULL5 1215 aa11.13□□□□□ -0.63
LINC00343-209ENST00000601607 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
LINC00343-209ENST00000601607 IER5Q5VY09 327 aa11.12□□□□□ -0.63
LINC00343-209ENST00000601607 GGA1Q9UJY5 639 aa11.12□□□□□ -0.63
LINC00343-209ENST00000601607 GDF2Q9UK05 429 aaPredicted RBP11.12□□□□□ -0.63
LINC00343-209ENST00000601607 LRFN2Q9ULH4 789 aa11.12□□□□□ -0.63
LINC00343-209ENST00000601607 SPATA31A6Q5VVP1 1343 aa11.11□□□□□ -0.63
LINC00343-209ENST00000601607 ABCC3O15438 1527 aa11.11□□□□□ -0.63
LINC00343-209ENST00000601607 SLIT1O75093 1534 aa11.11□□□□□ -0.63
LINC00343-209ENST00000601607 KCNA6P17658 529 aa11.11□□□□□ -0.63
LINC00343-209ENST00000601607 C11orf91Q3C1V1 193 aa11.11□□□□□ -0.63
LINC00343-209ENST00000601607 COX20Q5RI15 118 aa11.11□□□□□ -0.63
LINC00343-209ENST00000601607 EID1Q9Y6B2 187 aa11.11□□□□□ -0.63
LINC00343-209ENST00000601607 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
LINC00343-209ENST00000601607 ARAFP10398 606 aa11.1□□□□□ -0.63
LINC00343-209ENST00000601607 NAA30Q147X3 362 aaPredicted RBP11.1□□□□□ -0.63
LINC00343-209ENST00000601607 ALYREFQ86V81 257 aaKnown RBP11.1□□□□□ -0.63
LINC00343-209ENST00000601607 GOLGA6L1Q8N7Z2 621 aa11.1□□□□□ -0.63
LINC00343-209ENST00000601607 COL26A1Q96A83 441 aa11.1□□□□□ -0.63
LINC00343-209ENST00000601607 SAP130Q9H0E3 1048 aa11.1□□□□□ -0.63
LINC00343-209ENST00000601607 KCNH4Q9UQ05 1017 aa11.1□□□□□ -0.63
LINC00343-209ENST00000601607 CCDC141Q6ZP82 1450 aa11.09□□□□□ -0.63
LINC00343-209ENST00000601607 CDK12Q9NYV4 1490 aaPredicted RBP11.09□□□□□ -0.63
LINC00343-209ENST00000601607 MSH6P52701 1360 aa11.09□□□□□ -0.63
LINC00343-209ENST00000601607 MTUS2Q5JR59 1369 aa11.09□□□□□ -0.63
LINC00343-209ENST00000601607 NEURL1BA8MQ27 555 aa11.09□□□□□ -0.63
LINC00343-209ENST00000601607 PTCD1O75127 700 aaKnown RBP11.09□□□□□ -0.63
LINC00343-209ENST00000601607 C16orf46Q6P387 395 aa11.09□□□□□ -0.63
LINC00343-209ENST00000601607 SLC26A8Q96RN1 970 aa11.09□□□□□ -0.63
LINC00343-209ENST00000601607 DMGDHQ9UI17 866 aaKnown RBP11.09□□□□□ -0.63
LINC00343-209ENST00000601607 ADH6P28332 368 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 KCNQ4P56696 695 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 PCBP4P57723 403 aaKnown RBP11.08□□□□□ -0.64
LINC00343-209ENST00000601607 ZNF468Q5VIY5 522 aaPredicted RBP11.08□□□□□ -0.64
LINC00343-209ENST00000601607 SLCO4C1Q6ZQN7 724 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
LINC00343-209ENST00000601607 GALNT6Q8NCL4 622 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 IFT43Q96FT9 208 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 SLC30A3Q99726 388 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 MKL2Q9ULH7 1088 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 PHLPP1O60346 1717 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 UBR1Q8IWV7 1749 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 COL16A1Q07092 1604 aaPredicted RBP11.08□□□□□ -0.64
LINC00343-209ENST00000601607 PRDM15P57071 1507 aaPredicted RBP11.08□□□□□ -0.64
LINC00343-209ENST00000601607 FGD6Q6ZV73 1430 aa11.08□□□□□ -0.64
LINC00343-209ENST00000601607 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
LINC00343-209ENST00000601607 TMEM2Q9UHN6 1383 aa11.07□□□□□ -0.64
LINC00343-209ENST00000601607 IDH3AP50213 366 aa11.07□□□□□ -0.64
LINC00343-209ENST00000601607 SPEM2Q0P670 501 aa11.07□□□□□ -0.64
LINC00343-209ENST00000601607 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
LINC00343-209ENST00000601607 AVENQ9NQS1 362 aaPredicted RBP11.07□□□□□ -0.64
LINC00343-209ENST00000601607 KLF15Q9UIH9 416 aa11.07□□□□□ -0.64
LINC00343-209ENST00000601607 RGS12O14924 1447 aa11.07□□□□□ -0.64
LINC00343-209ENST00000601607 MICAL2O94851 1124 aa11.06□□□□□ -0.64
LINC00343-209ENST00000601607 EDARADDQ8WWZ3 215 aa11.06□□□□□ -0.64
LINC00343-209ENST00000601607 AFF2P51816 1311 aa11.06□□□□□ -0.64
LINC00343-209ENST00000601607 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
LINC00343-209ENST00000601607 INPP5BP32019 993 aa11.05□□□□□ -0.64
LINC00343-209ENST00000601607 SCNN1AP37088 669 aa11.05□□□□□ -0.64
LINC00343-209ENST00000601607 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
LINC00343-209ENST00000601607 SYT9Q86SS6 491 aa11.05□□□□□ -0.64
LINC00343-209ENST00000601607 SEPT3Q9UH03 358 aa11.05□□□□□ -0.64
LINC00343-209ENST00000601607 SHISA8B8ZZ34 492 aa11.04□□□□□ -0.64
LINC00343-209ENST00000601607 PIK3R2O00459 728 aa11.04□□□□□ -0.64
LINC00343-209ENST00000601607 EPXP11678 715 aa11.04□□□□□ -0.64
LINC00343-209ENST00000601607 SSFA2P28290 1259 aa11.04□□□□□ -0.64
LINC00343-209ENST00000601607 FCHSD1Q86WN1 690 aa11.04□□□□□ -0.64
LINC00343-209ENST00000601607 USTQ9Y2C2 406 aa11.04□□□□□ -0.64
LINC00343-209ENST00000601607 EPB42P16452 691 aa11.03□□□□□ -0.64
LINC00343-209ENST00000601607 ARSDP51689 593 aa11.03□□□□□ -0.64
LINC00343-209ENST00000601607 NEUROD1Q13562 356 aa11.03□□□□□ -0.64
LINC00343-209ENST00000601607 TREML1Q86YW5 311 aa11.03□□□□□ -0.64
LINC00343-209ENST00000601607 CAMSAP2Q08AD1 1489 aa11.03□□□□□ -0.64
LINC00343-209ENST00000601607 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
LINC00343-209ENST00000601607 TNFRSF10BO14763 440 aa11.02□□□□□ -0.65
LINC00343-209ENST00000601607 AMPD1P23109 780 aa11.02□□□□□ -0.65
LINC00343-209ENST00000601607 BRD2P25440 801 aaKnown RBP11.02□□□□□ -0.65
LINC00343-209ENST00000601607 ETFBKMTQ8IXQ9 262 aa11.02□□□□□ -0.65
LINC00343-209ENST00000601607 OPLAHO14841 1288 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 ADAM23O75077 832 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 PROCP04070 461 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 TSPY4P0CV99 314 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 TSPY10P0CW01 314 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
LINC00343-209ENST00000601607 SNRPNP63162 240 aaKnown RBP11.01□□□□□ -0.65
LINC00343-209ENST00000601607 RBM6P78332 1123 aaKnown RBP11.01□□□□□ -0.65
LINC00343-209ENST00000601607 BHMTQ93088 406 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 RRAGCQ9HB90 399 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 NWD1Q149M9 1564 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 MROH1Q8NDA8 1641 aa11.01□□□□□ -0.65
LINC00343-209ENST00000601607 TET3O43151 1660 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms