RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
USE1-209ENST00000601592 ZNF646O15015 1829 aaPredicted RBP15.96■□□□□ 0.15
USE1-209ENST00000601592 SRGAP3O43295 1099 aa15.96■□□□□ 0.15
USE1-209ENST00000601592 RFX5P48382 616 aaPredicted RBP15.96■□□□□ 0.15
USE1-209ENST00000601592 PTPN12Q05209 780 aaKnown RBP15.96■□□□□ 0.15
USE1-209ENST00000601592 PODNQ7Z5L7 613 aa15.96■□□□□ 0.15
USE1-209ENST00000601592 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.96■□□□□ 0.15
USE1-209ENST00000601592 COA1Q9GZY4 146 aa15.96■□□□□ 0.15
USE1-209ENST00000601592 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.15
USE1-209ENST00000601592 GPRC5DQ9NZD1 345 aa15.96■□□□□ 0.15
USE1-209ENST00000601592 PA2G4Q9UQ80 394 aaKnown RBP15.96■□□□□ 0.15
USE1-209ENST00000601592 EYA2O00167 538 aa15.95■□□□□ 0.14
USE1-209ENST00000601592 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
USE1-209ENST00000601592 ADAMTSL1Q8N6G6 1762 aa15.95■□□□□ 0.14
USE1-209ENST00000601592 SHTN1A0MZ66 631 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 USP17L3A6NCW0 530 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 USP17L4A6NCW7 530 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 FSTL1Q12841 308 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 UBE4AQ14139 1066 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 USP17L1Q7RTZ2 530 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 PNMA8AQ86V59 439 aaPredicted RBP15.94■□□□□ 0.14
USE1-209ENST00000601592 LDHDQ86WU2 507 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 MICALL2Q8IY33 904 aa15.94■□□□□ 0.14
USE1-209ENST00000601592 ADARB2Q9NS39 739 aaKnown RBP15.94■□□□□ 0.14
USE1-209ENST00000601592 CNOT7Q9UIV1 285 aaKnown RBP15.94■□□□□ 0.14
USE1-209ENST00000601592 H7C1D1 291 aa15.93■□□□□ 0.14
USE1-209ENST00000601592 VIL1P09327 827 aaKnown RBP15.93■□□□□ 0.14
USE1-209ENST00000601592 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
USE1-209ENST00000601592 CD209Q9NNX6 404 aa15.93■□□□□ 0.14
USE1-209ENST00000601592 COG6Q9Y2V7 657 aa15.93■□□□□ 0.14
USE1-209ENST00000601592 PDE8BO95263 885 aa15.92■□□□□ 0.14
USE1-209ENST00000601592 RPS12P25398 132 aaKnown RBP15.92■□□□□ 0.14
USE1-209ENST00000601592 GYG1P46976 350 aa15.92■□□□□ 0.14
USE1-209ENST00000601592 GTF2IP78347 998 aa15.92■□□□□ 0.14
USE1-209ENST00000601592 MVPQ14764 893 aaKnown RBP15.92■□□□□ 0.14
USE1-209ENST00000601592 RSBN1LQ6PCB5 846 aaPredicted RBP15.92■□□□□ 0.14
USE1-209ENST00000601592 C15orf52Q6ZUT6 534 aaKnown RBP15.92■□□□□ 0.14
USE1-209ENST00000601592 VPS37DQ86XT2 251 aa15.92■□□□□ 0.14
USE1-209ENST00000601592 POLR2AP24928 1970 aaKnown RBP15.92■□□□□ 0.14
USE1-209ENST00000601592 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
USE1-209ENST00000601592 PNMA6EA0A0J9YXQ4 647 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 ZBTB7BO15156 539 aaPredicted RBP15.91■□□□□ 0.14
USE1-209ENST00000601592 CIAO1O76071 339 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 HSPA6P17066 643 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 MTX1Q13505 466 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 PUM3Q15397 648 aaKnown RBP15.91■□□□□ 0.14
USE1-209ENST00000601592 RBM26Q5T8P6 1007 aaKnown RBP15.91■□□□□ 0.14
USE1-209ENST00000601592 TTLL5Q6EMB2 1281 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 USP50Q70EL3 339 aaPredicted RBP15.91■□□□□ 0.14
USE1-209ENST00000601592 ATG9AQ7Z3C6 839 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 VGLL2Q8N8G2 317 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 DPF2Q92785 391 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 MXD3Q9BW11 206 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 COPRSQ9NQ92 184 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 CEP126Q9P2H0 1117 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 FBXO3Q9UK99 471 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 JAG2Q9Y219 1238 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 ARAP2Q8WZ64 1704 aa15.91■□□□□ 0.14
USE1-209ENST00000601592 IFIT1P09914 478 aaKnown RBP15.9■□□□□ 0.14
USE1-209ENST00000601592 SLC5A1P13866 664 aa15.9■□□□□ 0.14
USE1-209ENST00000601592 HIBADHP31937 336 aaKnown RBP15.9■□□□□ 0.14
USE1-209ENST00000601592 IL15P40933 162 aaPredicted RBP15.9■□□□□ 0.14
USE1-209ENST00000601592 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
USE1-209ENST00000601592 STRIP1Q5VSL9 837 aa15.9■□□□□ 0.14
USE1-209ENST00000601592 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
USE1-209ENST00000601592 SAMD7Q7Z3H4 446 aa15.9■□□□□ 0.14
USE1-209ENST00000601592 AGBL3Q8NEM8 1001 aa15.9■□□□□ 0.14
USE1-209ENST00000601592 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
USE1-209ENST00000601592 DDX19BQ9UMR2 479 aa15.9■□□□□ 0.14
USE1-209ENST00000601592 FRAT2O75474 233 aaPredicted RBP15.89■□□□□ 0.13
USE1-209ENST00000601592 ATP2B3Q16720 1220 aa15.89■□□□□ 0.13
USE1-209ENST00000601592 CAVIN4Q5BKX8 364 aa15.89■□□□□ 0.13
USE1-209ENST00000601592 DACT2Q5SW24 774 aa15.89■□□□□ 0.13
USE1-209ENST00000601592 C20orf194Q5TEA3 1177 aa15.89■□□□□ 0.13
USE1-209ENST00000601592 IQSEC3Q9UPP2 1182 aaPredicted RBP15.89■□□□□ 0.13
USE1-209ENST00000601592 TRPM7Q96QT4 1865 aa15.88■□□□□ 0.13
USE1-209ENST00000601592 IL1R1P14778 569 aa15.88■□□□□ 0.13
USE1-209ENST00000601592 OS9Q13438 667 aaPredicted RBP15.88■□□□□ 0.13
USE1-209ENST00000601592 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
USE1-209ENST00000601592 MYO3BQ8WXR4 1341 aa15.88■□□□□ 0.13
USE1-209ENST00000601592 ZNF609O15014 1411 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 EGFRP00533 1210 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 USP17L8P0C7I0 530 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 ATP8B2P98198 1209 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 CHAF1AQ13111 956 aaPredicted RBP15.87■□□□□ 0.13
USE1-209ENST00000601592 G3BP1Q13283 466 aaKnown RBP eCLIP15.87■□□□□ 0.13
USE1-209ENST00000601592 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 KIF4BQ2VIQ3 1234 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 KIAA0825Q8IV33 1275 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 CNTROBQ8N137 903 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 LPIN2Q92539 896 aa15.87■□□□□ 0.13
USE1-209ENST00000601592 FGFR2P21802 821 aa15.86■□□□□ 0.13
USE1-209ENST00000601592 BCAMP50895 628 aa15.86■□□□□ 0.13
USE1-209ENST00000601592 APLP1P51693 650 aa15.86■□□□□ 0.13
USE1-209ENST00000601592 TFCP2Q12800 502 aa15.86■□□□□ 0.13
USE1-209ENST00000601592 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
USE1-209ENST00000601592 OGFOD1Q8N543 542 aa15.86■□□□□ 0.13
USE1-209ENST00000601592 GMLQ99445 158 aa15.86■□□□□ 0.13
USE1-209ENST00000601592 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
USE1-209ENST00000601592 ECM29Q5VYK3 1845 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms