RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CHRNA5P30532 468 aa27.41■■□□□ 1.98
IRF3-228ENST00000601291 UPF2Q9HAU5 1272 aaKnown RBP27.41■■□□□ 1.98
IRF3-228ENST00000601291 PAG1Q9NWQ8 432 aa27.41■■□□□ 1.98
IRF3-228ENST00000601291 NSFL1CQ9UNZ2 370 aaKnown RBP27.41■■□□□ 1.98
IRF3-228ENST00000601291 ATP2B4P23634 1241 aa27.4■■□□□ 1.98
IRF3-228ENST00000601291 GPSM2P81274 684 aa27.4■■□□□ 1.98
IRF3-228ENST00000601291 FSD1Q9BTV5 496 aa27.4■■□□□ 1.98
IRF3-228ENST00000601291 GNL3LQ9NVN8 582 aaKnown RBP27.4■■□□□ 1.98
IRF3-228ENST00000601291 CHMLP26374 656 aa27.39■■□□□ 1.98
IRF3-228ENST00000601291 VPS37DQ86XT2 251 aa27.39■■□□□ 1.98
IRF3-228ENST00000601291 PODXL2Q9NZ53 605 aa27.39■■□□□ 1.98
IRF3-228ENST00000601291 HIP1O00291 1037 aa27.39■■□□□ 1.97
IRF3-228ENST00000601291 GOLIM4O00461 696 aa27.39■■□□□ 1.97
IRF3-228ENST00000601291 FKBP4Q02790 459 aaKnown RBP eCLIP27.39■■□□□ 1.97
IRF3-228ENST00000601291 GGA1Q9UJY5 639 aa27.39■■□□□ 1.97
IRF3-228ENST00000601291 KIF13BQ9NQT8 1826 aa27.38■■□□□ 1.97
IRF3-228ENST00000601291 RFX7Q2KHR2 1363 aa27.38■■□□□ 1.97
IRF3-228ENST00000601291 MCAMP43121 646 aa27.38■■□□□ 1.97
IRF3-228ENST00000601291 BCAMP50895 628 aa27.38■■□□□ 1.97
IRF3-228ENST00000601291 PRPF40BQ6NWY9 871 aaKnown RBP27.38■■□□□ 1.97
IRF3-228ENST00000601291 DIAPH3Q9NSV4 1193 aa27.38■■□□□ 1.97
IRF3-228ENST00000601291 NDUFB9Q9Y6M9 179 aa27.38■■□□□ 1.97
IRF3-228ENST00000601291 DLEC1Q9Y238 1755 aa27.37■■□□□ 1.97
IRF3-228ENST00000601291 SEC24BO95487 1268 aa27.37■■□□□ 1.97
IRF3-228ENST00000601291 GYG1P46976 350 aa27.37■■□□□ 1.97
IRF3-228ENST00000601291 SCARF1Q14162 830 aa27.37■■□□□ 1.97
IRF3-228ENST00000601291 EDC3Q96F86 508 aaKnown RBP27.37■■□□□ 1.97
IRF3-228ENST00000601291 WTIPA6NIX2 430 aaPredicted RBP27.36■■□□□ 1.97
IRF3-228ENST00000601291 UFL1O94874 794 aa27.36■■□□□ 1.97
IRF3-228ENST00000601291 MFAP1P55081 439 aaKnown RBP27.36■■□□□ 1.97
IRF3-228ENST00000601291 SLC51AQ86UW1 340 aa27.36■■□□□ 1.97
IRF3-228ENST00000601291 TICAM2Q86XR7 235 aa27.36■■□□□ 1.97
IRF3-228ENST00000601291 KBTBD3Q8NAB2 608 aa27.36■■□□□ 1.97
IRF3-228ENST00000601291 SNRKQ9NRH2 765 aa27.36■■□□□ 1.97
IRF3-228ENST00000601291 FAM84BQ96KN1 310 aaPredicted RBP27.35■■□□□ 1.97
IRF3-228ENST00000601291 SGIP1Q9BQI5 828 aa27.35■■□□□ 1.97
IRF3-228ENST00000601291 ZAP70P43403 619 aa27.35■■□□□ 1.97
IRF3-228ENST00000601291 TGFB2P61812 414 aa27.35■■□□□ 1.97
IRF3-228ENST00000601291 TTF1Q15361 905 aaPredicted RBP27.35■■□□□ 1.97
IRF3-228ENST00000601291 C15orf52Q6ZUT6 534 aaKnown RBP27.35■■□□□ 1.97
IRF3-228ENST00000601291 SPATA5Q8NB90 893 aa27.35■■□□□ 1.97
IRF3-228ENST00000601291 HIBADHP31937 336 aaKnown RBP27.34■■□□□ 1.97
IRF3-228ENST00000601291 RASGRF1Q13972 1273 aa27.34■■□□□ 1.97
IRF3-228ENST00000601291 LRRFIP1Q32MZ4 808 aaKnown RBP27.34■■□□□ 1.97
IRF3-228ENST00000601291 FBXO33Q7Z6M2 555 aa27.34■■□□□ 1.97
IRF3-228ENST00000601291 RUFY2Q8WXA3 655 aa27.34■■□□□ 1.97
IRF3-228ENST00000601291 CACNA1SQ13698 1873 aa27.34■■□□□ 1.97
IRF3-228ENST00000601291 LTBP1Q14766 1721 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 KLRK1P26718 216 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 PI16Q6UXB8 463 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 MPNDQ8N594 471 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 TBC1D16Q8TBP0 767 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 ESYT1Q9BSJ8 1104 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 HMG20BQ9P0W2 317 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 IRS2Q9Y4H2 1338 aa27.33■■□□□ 1.97
IRF3-228ENST00000601291 SEMA3EO15041 775 aa27.32■■□□□ 1.96
IRF3-228ENST00000601291 DPEP1P16444 411 aa27.32■■□□□ 1.96
IRF3-228ENST00000601291 DPP8Q6V1X1 898 aaPredicted RBP27.32■■□□□ 1.96
IRF3-228ENST00000601291 REC8O95072 547 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 ZNF804AQ7Z570 1209 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 TTLL6Q8N841 843 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 ANTXR1Q9H6X2 564 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 MED23Q9ULK4 1368 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 A0A0G2JLW4 131 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 C6orf229H3BNL8 230 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 PTGER2P43116 358 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 CC2D2BQ6DHV5 1058 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 POLLQ9UGP5 575 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 DENND2AQ9ULE3 1009 aa27.31■■□□□ 1.96
IRF3-228ENST00000601291 AKAP11Q9UKA4 1901 aa27.3■■□□□ 1.96
IRF3-228ENST00000601291 FRAT2O75474 233 aaPredicted RBP27.3■■□□□ 1.96
IRF3-228ENST00000601291 CWC27Q6UX04 472 aaKnown RBP27.3■■□□□ 1.96
IRF3-228ENST00000601291 RBM19Q9Y4C8 960 aaKnown RBP27.3■■□□□ 1.96
IRF3-228ENST00000601291 CD2APQ9Y5K6 639 aa27.3■■□□□ 1.96
IRF3-228ENST00000601291 SLX4Q8IY92 1834 aa27.29■■□□□ 1.96
IRF3-228ENST00000601291 CYP2E1P05181 493 aaPredicted RBP27.29■■□□□ 1.96
IRF3-228ENST00000601291 TXNRD3Q86VQ6 643 aa27.29■■□□□ 1.96
IRF3-228ENST00000601291 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.29■■□□□ 1.962e-6■■■■□ 21.1
IRF3-228ENST00000601291 SPON1Q9HCB6 807 aa27.29■■□□□ 1.96
IRF3-228ENST00000601291 PPP1R1BQ9UD71 204 aaPredicted RBP27.29■■□□□ 1.96
IRF3-228ENST00000601291 RAD50Q92878 1312 aa27.29■■□□□ 1.96
IRF3-228ENST00000601291 ZBTB22O15209 634 aa27.28■■□□□ 1.96
IRF3-228ENST00000601291 OLFM4Q6UX06 510 aa27.28■■□□□ 1.96
IRF3-228ENST00000601291 IQSEC3Q9UPP2 1182 aaPredicted RBP27.28■■□□□ 1.96
IRF3-228ENST00000601291 PDS5AQ29RF7 1337 aaKnown RBP27.28■■□□□ 1.96
IRF3-228ENST00000601291 GRIPAP1Q4V328 841 aa27.27■■□□□ 1.96
IRF3-228ENST00000601291 ZSCAN25Q6NSZ9 544 aa27.27■■□□□ 1.96
IRF3-228ENST00000601291 DUOX1Q9NRD9 1551 aa27.27■■□□□ 1.96
IRF3-228ENST00000601291 KIAA1551Q9HCM1 1747 aa27.27■■□□□ 1.96
IRF3-228ENST00000601291 SGSM2O43147 1006 aa27.26■■□□□ 1.96
IRF3-228ENST00000601291 ZFYP08048 801 aaPredicted RBP27.26■■□□□ 1.96
IRF3-228ENST00000601291 KCNA3P22001 575 aa27.26■■□□□ 1.96
IRF3-228ENST00000601291 NMIQ13287 307 aaPredicted RBP27.26■■□□□ 1.96
IRF3-228ENST00000601291 KLHL34Q8N239 644 aa27.26■■□□□ 1.96
IRF3-228ENST00000601291 GPR101Q96P66 508 aaPredicted RBP27.26■■□□□ 1.96
IRF3-228ENST00000601291 EYA3Q99504 573 aa27.26■■□□□ 1.96
IRF3-228ENST00000601291 C7orf43Q8WVR3 580 aa27.26■■□□□ 1.95
IRF3-228ENST00000601291 PIM2Q9P1W9 311 aa27.26■■□□□ 1.95
IRF3-228ENST00000601291 ZNF219Q9P2Y4 722 aaPredicted RBP27.26■■□□□ 1.95
IRF3-228ENST00000601291 WASHC4Q2M389 1173 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms