RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, human

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-211	ENST00000601222	SHTN1	A0MZ66	631 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	USP17L3	A6NCW0	530 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	USP17L4	A6NCW7	530 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	TAF5L	O75529	589 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	KLRK1	P26718	216 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	MAP1S	Q66K74	1059 aa	Predicted RBP	11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	USP17L1	Q7RTZ2	530 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	DNAJC5G	Q8N7S2	189 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	AGBL3	Q8NEM8	1001 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	FRAT1	Q92837	279 aa	Predicted RBP	11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	PUS3	Q9BZE2	481 aa	Known RBP	11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	RIPOR2	Q9Y4F9	1068 aa		11.47	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	MROH5	Q6ZUA9	1318 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	SNAP23	O00161	211 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	HIRA	P54198	1017 aa	Predicted RBP	11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	HTRA3	P83110	453 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	UBE4A	Q14139	1066 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	ZKSCAN2	Q63HK3	967 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	TRPM4	Q8TD43	1214 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	ZC3H15	Q8WU90	426 aa	Known RBP	11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	GML	Q99445	158 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	MEIS3	Q99687	375 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	CREBZF	Q9NS37	354 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	PGAP2	Q9UHJ9	254 aa		11.46	□□□□□ -0.57
SIPA1L3-211	ENST00000601222	PLIN1	O60240	522 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	GNAI3	P08754	354 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	RFX5	P48382	616 aa	Predicted RBP	11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	LRRC24	Q50LG9	513 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	DACT2	Q5SW24	774 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	STRIP1	Q5VSL9	837 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	SAMD7	Q7Z3H4	446 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	CD209	Q9NNX6	404 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	TNN	Q9UQP3	1299 aa		11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	LRRFIP2	Q9Y608	721 aa	Known RBP	11.45	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	MYO3B	Q8WXR4	1341 aa		11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	ZNF280A	P59817	542 aa	Predicted RBP	11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	PTPN12	Q05209	780 aa	Known RBP	11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	TTLL5	Q6EMB2	1281 aa		11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	ZNF804A	Q7Z570	1209 aa		11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	VGLL2	Q8N8G2	317 aa		11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	KLHDC4	Q8TBB5	520 aa		11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	CLUAP1	Q96AJ1	413 aa		11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	KLRG1	Q96E93	195 aa		11.44	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	TMEM88B	A6NKF7	163 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	EYA2	O00167	538 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	EGFR	P00533	1210 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	USP17L8	P0C7I0	530 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	IL1R1	P14778	569 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	MMP14	P50281	582 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	KIF4B	Q2VIQ3	1234 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	METTL24	Q5JXM2	366 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FBXW7	Q969H0	707 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FBXO3	Q9UK99	471 aa		11.43	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	CIAO1	O76071	339 aa		11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	PDE8B	O95263	885 aa		11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	GTF2I	P78347	998 aa		11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	RBM26	Q5T8P6	1007 aa	Known RBP	11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FTSJ3	Q8IY81	847 aa	Known RBP	11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	TMEM57	Q8N5G2	664 aa		11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FAM84B	Q96KN1	310 aa	Predicted RBP	11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	MXD3	Q9BW11	206 aa		11.42	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	TRAF5	O00463	557 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	GNAI2	P04899	355 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FGFR2	P21802	821 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	HIBADH	P31937	336 aa	Known RBP	11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	MTX1	Q13505	466 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	PUM3	Q15397	648 aa	Known RBP	11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	CDC37L1	Q7L3B6	337 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	ATG9A	Q7Z3C6	839 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	DZIP1L	Q8IYY4	767 aa	Known RBP	11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	OGFOD1	Q8N543	542 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	MYOZ2	Q9NPC6	264 aa		11.41	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	SASH1	O94885	1247 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	RLBP1	P12271	317 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	GYG1	P46976	350 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FKBP1A	P62942	108 aa	Known RBP	11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FMR1	Q06787	632 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	FBXO33	Q7Z6M2	555 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	JMY	Q8N9B5	988 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	TDRD7	Q8NHU6	1098 aa	Known RBP	11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	SIL1	Q9H173	461 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	COPRS	Q9NQ92	184 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	MYH13	Q9UKX3	1938 aa		11.4	□□□□□ -0.58
SIPA1L3-211	ENST00000601222	CNTNAP1	P78357	1384 aa		11.4	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	FAM205A	Q6ZU69	1335 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	SRGAP3	O43295	1099 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	IFIT1	P09914	478 aa	Known RBP	11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	IL15	P40933	162 aa	Predicted RBP	11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	SCARF1	Q14162	830 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	CAVIN4	Q5BKX8	364 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	CST9	Q5W186	159 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	KRT26	Q7Z3Y9	468 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	USP48	Q86UV5	1035 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	VPS37D	Q86XT2	251 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	KIAA0825	Q8IV33	1275 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	CERS5	Q8N5B7	392 aa		11.39	□□□□□ -0.59
SIPA1L3-211	ENST00000601222	LPIN2	Q92539	896 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms