RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 GGA3Q9NZ52 723 aa21.68■■□□□ 1.06
SCAF1-204ENST00000601038 LEMD3Q9Y2U8 911 aa21.68■■□□□ 1.06
SCAF1-204ENST00000601038 PSME4Q14997 1843 aa21.67■■□□□ 1.06
SCAF1-204ENST00000601038 BRPF1P55201 1214 aaPredicted RBP21.67■■□□□ 1.06
SCAF1-204ENST00000601038 C2orf69Q8N8R5 385 aa21.67■■□□□ 1.06
SCAF1-204ENST00000601038 CA12O43570 354 aa21.66■■□□□ 1.06
SCAF1-204ENST00000601038 NOGQ13253 232 aa21.66■■□□□ 1.06
SCAF1-204ENST00000601038 SCARF1Q14162 830 aa21.66■■□□□ 1.06
SCAF1-204ENST00000601038 MPHOSPH8Q99549 860 aa21.66■■□□□ 1.06
SCAF1-204ENST00000601038 ANKRD2Q9GZV1 360 aa21.66■■□□□ 1.06
SCAF1-204ENST00000601038 COA1Q9GZY4 146 aa21.66■■□□□ 1.06
SCAF1-204ENST00000601038 SPINK5Q9NQ38 1064 aaPredicted RBP21.66■■□□□ 1.06
SCAF1-204ENST00000601038 ASTN2O75129 1339 aaPredicted RBP21.65■■□□□ 1.06
SCAF1-204ENST00000601038 FAM161AQ3B820 660 aa21.65■■□□□ 1.06
SCAF1-204ENST00000601038 MYOZ2Q9NPC6 264 aa21.65■■□□□ 1.06
SCAF1-204ENST00000601038 ANGEL2Q5VTE6 544 aaKnown RBP21.64■■□□□ 1.05
SCAF1-204ENST00000601038 RGMBQ6NW40 437 aa21.64■■□□□ 1.05
SCAF1-204ENST00000601038 SPEF2Q9C093 1822 aa21.64■■□□□ 1.05
SCAF1-204ENST00000601038 ZNF804BA4D1E1 1349 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 F6X3S4 739 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 DACT2Q5SW24 774 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 BEND3Q5T5X7 828 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 STRIP1Q5VSL9 837 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 TXNRD3Q86VQ6 643 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 FAM9BQ8IZU0 186 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 CCDC102AQ96A19 550 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 TSKSQ9UJT2 592 aa21.63■■□□□ 1.05
SCAF1-204ENST00000601038 PITPNM2Q9BZ72 1349 aa21.62■■□□□ 1.05
SCAF1-204ENST00000601038 ANKRD18BA2A2Z9 1011 aa21.62■■□□□ 1.05
SCAF1-204ENST00000601038 CDCA5Q96FF9 252 aa21.62■■□□□ 1.05
SCAF1-204ENST00000601038 ZIC5Q96T25 663 aa21.62■■□□□ 1.05
SCAF1-204ENST00000601038 MYO3BQ8WXR4 1341 aa21.61■■□□□ 1.05
SCAF1-204ENST00000601038 FAM155AB1AL88 458 aaPredicted RBP21.61■■□□□ 1.05
SCAF1-204ENST00000601038 CHRNDQ07001 517 aa21.61■■□□□ 1.05
SCAF1-204ENST00000601038 OGFOD1Q8N543 542 aa21.61■■□□□ 1.05
SCAF1-204ENST00000601038 MMP14P50281 582 aa21.6■■□□□ 1.05
SCAF1-204ENST00000601038 ZNF157P51786 506 aaPredicted RBP21.6■■□□□ 1.05
SCAF1-204ENST00000601038 FOXO4P98177 505 aa21.6■■□□□ 1.05
SCAF1-204ENST00000601038 IFIT5Q13325 482 aaKnown RBP21.6■■□□□ 1.05
SCAF1-204ENST00000601038 MXD3Q9BW11 206 aa21.6■■□□□ 1.05
SCAF1-204ENST00000601038 TTLL5Q6EMB2 1281 aa21.59■■□□□ 1.05
SCAF1-204ENST00000601038 FBXW7Q969H0 707 aa21.59■■□□□ 1.05
SCAF1-204ENST00000601038 ABHD8Q96I13 439 aa21.59■■□□□ 1.05
SCAF1-204ENST00000601038 KLRK1P26718 216 aa21.58■■□□□ 1.05
SCAF1-204ENST00000601038 KCNJ4P48050 445 aa21.58■■□□□ 1.05
SCAF1-204ENST00000601038 FKBP1BP68106 108 aa21.58■■□□□ 1.05
SCAF1-204ENST00000601038 NBPF9Q3BBW0 867 aa21.58■■□□□ 1.05
SCAF1-204ENST00000601038 GRM8O00222 908 aa21.56■■□□□ 1.04
SCAF1-204ENST00000601038 WNT10BO00744 389 aa21.56■■□□□ 1.04
SCAF1-204ENST00000601038 KIF23Q02241 960 aaPredicted RBP21.56■■□□□ 1.04
SCAF1-204ENST00000601038 LMBR1LQ6UX01 489 aa21.56■■□□□ 1.04
SCAF1-204ENST00000601038 C15orf52Q6ZUT6 534 aaKnown RBP21.56■■□□□ 1.04
SCAF1-204ENST00000601038 CHMP3Q9Y3E7 222 aa21.56■■□□□ 1.04
SCAF1-204ENST00000601038 ZNF646O15015 1829 aaPredicted RBP21.55■■□□□ 1.04
SCAF1-204ENST00000601038 TAF5LO75529 589 aa21.55■■□□□ 1.04
SCAF1-204ENST00000601038 ALDH1L1O75891 902 aa21.55■■□□□ 1.04
SCAF1-204ENST00000601038 SLC10A3P09131 477 aa21.55■■□□□ 1.04
SCAF1-204ENST00000601038 GTF2IP78347 998 aa21.55■■□□□ 1.04
SCAF1-204ENST00000601038 CD209Q9NNX6 404 aa21.55■■□□□ 1.04
SCAF1-204ENST00000601038 C9orf78Q9NZ63 289 aaPredicted RBP21.55■■□□□ 1.04
SCAF1-204ENST00000601038 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
SCAF1-204ENST00000601038 CCDC57Q2TAC2 916 aa21.54■■□□□ 1.04
SCAF1-204ENST00000601038 EPHA10Q5JZY3 1008 aa21.54■■□□□ 1.04
SCAF1-204ENST00000601038 HELBQ8NG08 1087 aaPredicted RBP21.54■■□□□ 1.04
SCAF1-204ENST00000601038 HDAC9Q9UKV0 1011 aa21.54■■□□□ 1.04
SCAF1-204ENST00000601038 SCAF8Q9UPN6 1271 aaKnown RBP21.54■■□□□ 1.04
SCAF1-204ENST00000601038 IRS2Q9Y4H2 1338 aa21.54■■□□□ 1.04
SCAF1-204ENST00000601038 SNAP23O00161 211 aa21.53■■□□□ 1.04
SCAF1-204ENST00000601038 SLC4A10Q6U841 1118 aa21.53■■□□□ 1.04
SCAF1-204ENST00000601038 KIAA0825Q8IV33 1275 aa21.53■■□□□ 1.04
SCAF1-204ENST00000601038 SRCIN1Q9C0H9 1055 aa21.53■■□□□ 1.04
SCAF1-204ENST00000601038 SAGE1Q9NXZ1 904 aa21.53■■□□□ 1.04
SCAF1-204ENST00000601038 CASP8AP2Q9UKL3 1982 aa21.52■■□□□ 1.04
SCAF1-204ENST00000601038 LDHAL6AQ6ZMR3 332 aa21.52■■□□□ 1.04
SCAF1-204ENST00000601038 REM2Q8IYK8 340 aaPredicted RBP21.52■■□□□ 1.04
SCAF1-204ENST00000601038 PAPPA2Q9BXP8 1791 aa21.51■■□□□ 1.03
SCAF1-204ENST00000601038 SASH1O94885 1247 aa21.51■■□□□ 1.03
SCAF1-204ENST00000601038 TAF7LQ5H9L4 462 aa21.51■■□□□ 1.03
SCAF1-204ENST00000601038 PRAMEF18Q5VWM3 479 aa21.51■■□□□ 1.03
SCAF1-204ENST00000601038 RASAL3Q86YV0 1011 aa21.51■■□□□ 1.03
SCAF1-204ENST00000601038 CSRNP1Q96S65 589 aa21.51■■□□□ 1.03
SCAF1-204ENST00000601038 IL1R1P14778 569 aa21.5■■□□□ 1.03
SCAF1-204ENST00000601038 ZNF804AQ7Z570 1209 aa21.5■■□□□ 1.03
SCAF1-204ENST00000601038 ZBED3Q96IU2 234 aaPredicted RBP21.5■■□□□ 1.03
SCAF1-204ENST00000601038 ZNF594Q96JF6 807 aaPredicted RBP21.5■■□□□ 1.03
SCAF1-204ENST00000601038 RNF186Q9NXI6 227 aa21.5■■□□□ 1.03
SCAF1-204ENST00000601038 NF2P35240 595 aa21.49■■□□□ 1.03
SCAF1-204ENST00000601038 MOB2Q70IA6 237 aa21.49■■□□□ 1.03
SCAF1-204ENST00000601038 APOBEC3FQ8IUX4 373 aaKnown RBP21.49■■□□□ 1.03
SCAF1-204ENST00000601038 CNNM1Q9NRU3 951 aa21.49■■□□□ 1.03
SCAF1-204ENST00000601038 UBE2Q2LH0YL09 131 aa21.48■■□□□ 1.03
SCAF1-204ENST00000601038 TRPA1O75762 1119 aa21.48■■□□□ 1.03
SCAF1-204ENST00000601038 CERS5Q8N5B7 392 aa21.48■■□□□ 1.03
SCAF1-204ENST00000601038 MCOLN1Q9GZU1 580 aa21.48■■□□□ 1.03
SCAF1-204ENST00000601038 CCDC85CA6NKD9 419 aa21.47■■□□□ 1.03
SCAF1-204ENST00000601038 PLIN1O60240 522 aa21.47■■□□□ 1.03
SCAF1-204ENST00000601038 FKBP1AP62942 108 aaKnown RBP21.47■■□□□ 1.03
SCAF1-204ENST00000601038 TTLL12Q14166 644 aaPredicted RBP21.47■■□□□ 1.03
SCAF1-204ENST00000601038 DLGAP5Q15398 846 aa21.47■■□□□ 1.03
SCAF1-204ENST00000601038 MTMR14Q8NCE2 650 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms