RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 USP44Q9H0E7 712 aa21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 PGAP2Q9UHJ9 254 aa21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 ZNF609O15014 1411 aa21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 TRPM7Q96QT4 1865 aa21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 KLRK1P26718 216 aa21.16■□□□□ 0.98
NOTCH3-205ENST00000600841 RABL6Q3YEC7 729 aaPredicted RBP21.16■□□□□ 0.98
NOTCH3-205ENST00000600841 KIF16BQ96L93 1317 aa21.15■□□□□ 0.98
NOTCH3-205ENST00000600841 TRAF5O00463 557 aa21.15■□□□□ 0.98
NOTCH3-205ENST00000600841 RBM26Q5T8P6 1007 aaKnown RBP21.15■□□□□ 0.98
NOTCH3-205ENST00000600841 ANKRD44Q8N8A2 993 aa21.15■□□□□ 0.98
NOTCH3-205ENST00000600841 MKRN1Q9UHC7 482 aaKnown RBP21.15■□□□□ 0.98
NOTCH3-205ENST00000600841 PLIN1O60240 522 aa21.14■□□□□ 0.97
NOTCH3-205ENST00000600841 FBXW7Q969H0 707 aa21.14■□□□□ 0.97
NOTCH3-205ENST00000600841 CNTNAP1P78357 1384 aa21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 SNAP23O00161 211 aa21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 EGFRP00533 1210 aa21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 ZNF280AP59817 542 aaPredicted RBP21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 FMR1Q06787 632 aaKnown RBP eCLIP21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 STRIP1Q5VSL9 837 aa21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 C15orf52Q6ZUT6 534 aaKnown RBP21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 CDC37L1Q7L3B6 337 aa21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 GMLQ99445 158 aa21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 GLIS2Q9BZE0 524 aaPredicted RBP21.13■□□□□ 0.97
NOTCH3-205ENST00000600841 POLR2AP24928 1970 aaKnown RBP21.12■□□□□ 0.97
NOTCH3-205ENST00000600841 USP17L8P0C7I0 530 aa21.12■□□□□ 0.97
NOTCH3-205ENST00000600841 DACT2Q5SW24 774 aa21.12■□□□□ 0.97
NOTCH3-205ENST00000600841 ARHGAP45Q92619 1136 aa21.12■□□□□ 0.97
NOTCH3-205ENST00000600841 ABT1Q9ULW3 272 aaKnown RBP21.12■□□□□ 0.97
NOTCH3-205ENST00000600841 MYO3BQ8WXR4 1341 aa21.11■□□□□ 0.97
NOTCH3-205ENST00000600841 IRS2Q9Y4H2 1338 aa21.11■□□□□ 0.97
NOTCH3-205ENST00000600841 TTLL5Q6EMB2 1281 aa21.11■□□□□ 0.97
NOTCH3-205ENST00000600841 ZNF804AQ7Z570 1209 aa21.11■□□□□ 0.97
NOTCH3-205ENST00000600841 PUS3Q9BZE2 481 aaKnown RBP21.11■□□□□ 0.97
NOTCH3-205ENST00000600841 CD209Q9NNX6 404 aa21.11■□□□□ 0.97
NOTCH3-205ENST00000600841 ZNF646O15015 1829 aaPredicted RBP21.11■□□□□ 0.97
NOTCH3-205ENST00000600841 IPO8O15397 1037 aaKnown RBP21.1■□□□□ 0.97
NOTCH3-205ENST00000600841 UBTFL1P0CB47 393 aaPredicted RBP21.1■□□□□ 0.97
NOTCH3-205ENST00000600841 DCPSQ96C86 337 aaKnown RBP21.1■□□□□ 0.97
NOTCH3-205ENST00000600841 RIPOR2Q9Y4F9 1068 aa21.1■□□□□ 0.97
NOTCH3-205ENST00000600841 MROH5Q6ZUA9 1318 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 CELF2O95319 508 aaKnown RBP21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 CST9Q5W186 159 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 KRT26Q7Z3Y9 468 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 USP48Q86UV5 1035 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 OGFOD1Q8N543 542 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 MXD3Q9BW11 206 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 MYOZ2Q9NPC6 264 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 HDAC5Q9UQL6 1122 aa21.09■□□□□ 0.97
NOTCH3-205ENST00000600841 RASSF10A6NK89 507 aa21.08■□□□□ 0.97
NOTCH3-205ENST00000600841 GTF2IP78347 998 aa21.08■□□□□ 0.97
NOTCH3-205ENST00000600841 UBE4AQ14139 1066 aa21.08■□□□□ 0.97
NOTCH3-205ENST00000600841 DEFB115Q30KQ5 88 aa21.08■□□□□ 0.97
NOTCH3-205ENST00000600841 ZBED9Q6R2W3 1325 aa21.07■□□□□ 0.96
NOTCH3-205ENST00000600841 BCAR3O75815 825 aa21.07■□□□□ 0.96
NOTCH3-205ENST00000600841 VEGFBP49765 207 aa21.07■□□□□ 0.96
NOTCH3-205ENST00000600841 LRRC24Q50LG9 513 aa21.07■□□□□ 0.96
NOTCH3-205ENST00000600841 METTL24Q5JXM2 366 aa21.07■□□□□ 0.96
NOTCH3-205ENST00000600841 GGA3Q9NZ52 723 aa21.07■□□□□ 0.96
NOTCH3-205ENST00000600841 IL1R1P14778 569 aa21.06■□□□□ 0.96
NOTCH3-205ENST00000600841 MMP14P50281 582 aa21.06■□□□□ 0.96
NOTCH3-205ENST00000600841 SCARF1Q14162 830 aa21.06■□□□□ 0.96
NOTCH3-205ENST00000600841 INTS3Q68E01 1043 aaKnown RBP21.06■□□□□ 0.96
NOTCH3-205ENST00000600841 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
NOTCH3-205ENST00000600841 FRAT1Q92837 279 aaPredicted RBP21.06■□□□□ 0.96
NOTCH3-205ENST00000600841 ZNF408Q9H9D4 720 aa21.06■□□□□ 0.96
NOTCH3-205ENST00000600841 ATF7IPQ6VMQ6 1270 aa21.05■□□□□ 0.96
NOTCH3-205ENST00000600841 SULF1Q8IWU6 871 aa21.05■□□□□ 0.96
NOTCH3-205ENST00000600841 TLL2Q9Y6L7 1015 aa21.05■□□□□ 0.96
NOTCH3-205ENST00000600841 ASTN2O75129 1339 aaPredicted RBP21.04■□□□□ 0.96
NOTCH3-205ENST00000600841 ADM5C9JUS6 153 aa21.04■□□□□ 0.96
NOTCH3-205ENST00000600841 TRIM27P14373 513 aa21.04■□□□□ 0.96
NOTCH3-205ENST00000600841 KIAA0825Q8IV33 1275 aa21.04■□□□□ 0.96
NOTCH3-205ENST00000600841 MEIS3Q99687 375 aa21.04■□□□□ 0.96
NOTCH3-205ENST00000600841 HDAC9Q9UKV0 1011 aa21.04■□□□□ 0.96
NOTCH3-205ENST00000600841 LRRFIP2Q9Y608 721 aaKnown RBP21.04■□□□□ 0.96
NOTCH3-205ENST00000600841 HIBADHP31937 336 aaKnown RBP21.03■□□□□ 0.96
NOTCH3-205ENST00000600841 RFX5P48382 616 aaPredicted RBP21.03■□□□□ 0.96
NOTCH3-205ENST00000600841 ANGEL2Q5VTE6 544 aaKnown RBP21.03■□□□□ 0.96
NOTCH3-205ENST00000600841 PAXIP1Q6ZW49 1069 aaPredicted RBP21.03■□□□□ 0.96
NOTCH3-205ENST00000600841 EYA2O00167 538 aa21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 PDE8BO95263 885 aa21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 GNAI3P08754 354 aa21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 HSPA1AP0DMV8 641 aaKnown RBP21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 HSPA1BP0DMV9 641 aaKnown RBP21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 GYG1P46976 350 aa21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 DLK2Q6UY11 383 aa21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 VGLL2Q8N8G2 317 aa21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 FAM84BQ96KN1 310 aaPredicted RBP21.02■□□□□ 0.96
NOTCH3-205ENST00000600841 PITPNM2Q9BZ72 1349 aa21.02■□□□□ 0.95
NOTCH3-205ENST00000600841 SASH1O94885 1247 aa21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 ECE1P42892 770 aa21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 FKBP1AP62942 108 aaKnown RBP21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 PTPN12Q05209 780 aaKnown RBP21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 NBPF9Q3BBW0 867 aa21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 SAPCD2Q86UD0 394 aa21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 VPS37DQ86XT2 251 aa21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 WDR33Q9C0J8 1336 aaKnown RBP21.01■□□□□ 0.95
NOTCH3-205ENST00000600841 WNT10BO00744 389 aa21■□□□□ 0.95
NOTCH3-205ENST00000600841 ZKSCAN2Q63HK3 967 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms