RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 TBC1D16Q8TBP0 767 aa13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TRIM17Q9Y577 477 aa13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 APAF1O14727 1248 aa13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TMC4Q7Z404 712 aa13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 RASAL3Q86YV0 1011 aa13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 DPF2Q92785 391 aa13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 C6orf229H3BNL8 230 aa13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 WDR43Q15061 677 aaKnown RBP eCLIP13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 MYD88Q99836 296 aa13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 MUC6Q6W4X9 2439 aa13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 DPF3Q92784 378 aa13.1□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 ZNF609O15014 1411 aa13.1□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TMEM265A0A087WTH1 108 aa13.09□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 H7C1D1 291 aa13.09□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 UFL1O94874 794 aa13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 IGKV5-2P06315 115 aa13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 KRT26Q7Z3Y9 468 aa13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 SCAF8Q9UPN6 1271 aaKnown RBP13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 PTPN22Q9Y2R2 807 aa13.08□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ZNF333Q96JL9 665 aa13.07□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 GMLQ99445 158 aa13.07□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 RPS12P25398 132 aaKnown RBP13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 MAP3K12Q12852 859 aa13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 G2E3Q7L622 706 aa13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 MXD3Q9BW11 206 aa13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 RPTORQ8N122 1335 aa13.06□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 PDE8AO60658 829 aa13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ZNF280AP59817 542 aaPredicted RBP13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 GNAI1P63096 354 aa13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CDCA5Q96FF9 252 aa13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 EYA3Q99504 573 aa13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 MAP3K2Q9Y2U5 619 aa13.05□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CACNA1FO60840 1977 aa13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 RSBN1LQ6PCB5 846 aaPredicted RBP13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 GREM2Q9H772 168 aa13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CDH23Q9H251 3354 aa13.04□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 LAMB1P07942 1786 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 TNFRSF10AO00220 468 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 KLRK1P26718 216 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CTSWP56202 376 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 SLC4A8Q2Y0W8 1093 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 TTLL11Q8NHH1 800 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 XDHP47989 1333 aa13.03□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 ALPK3Q96L96 1907 aa13.02□□□□□ -0.32
MIA-RAB4B-201ENST00000600729 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 TM4SF4P48230 202 aa13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SCARF1Q14162 830 aa13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SYMPKQ92797 1274 aaKnown RBP13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 DCPSQ96C86 337 aaKnown RBP13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 CACNA1GO43497 2377 aa13.01□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 CASP7P55210 303 aa13.01□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 NBPF9Q3BBW0 867 aa13.01□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 ANKRD18AQ8IVF6 992 aa13.01□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 MYOZ2Q9NPC6 264 aa13.01□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms