RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 MYO3BQ8WXR4 1341 aa14.54□□□□□ -0.08
HIF3A-217ENST00000600236 TRPM7Q96QT4 1865 aa14.53□□□□□ -0.08
HIF3A-217ENST00000600236 ADM5C9JUS6 153 aa14.53□□□□□ -0.08
HIF3A-217ENST00000600236 AOC2O75106 756 aa14.53□□□□□ -0.08
HIF3A-217ENST00000600236 CSF1RP07333 972 aa14.53□□□□□ -0.08
HIF3A-217ENST00000600236 BRPF1P55201 1214 aaPredicted RBP14.53□□□□□ -0.08
HIF3A-217ENST00000600236 OGFOD1Q8N543 542 aa14.53□□□□□ -0.08
HIF3A-217ENST00000600236 FBXW7Q969H0 707 aa14.53□□□□□ -0.08
HIF3A-217ENST00000600236 MYOZ2Q9NPC6 264 aa14.53□□□□□ -0.08
HIF3A-217ENST00000600236 ZNF804BA4D1E1 1349 aa14.52□□□□□ -0.08
HIF3A-217ENST00000600236 MMP14P50281 582 aa14.52□□□□□ -0.09
HIF3A-217ENST00000600236 CASP7P55210 303 aa14.52□□□□□ -0.09
HIF3A-217ENST00000600236 IFIT5Q13325 482 aaKnown RBP14.52□□□□□ -0.09
HIF3A-217ENST00000600236 SCARF1Q14162 830 aa14.52□□□□□ -0.09
HIF3A-217ENST00000600236 STRIP1Q5VSL9 837 aa14.52□□□□□ -0.09
HIF3A-217ENST00000600236 ANGEL2Q5VTE6 544 aaKnown RBP14.52□□□□□ -0.09
HIF3A-217ENST00000600236 RGMBQ6NW40 437 aa14.52□□□□□ -0.09
HIF3A-217ENST00000600236 CHMP3Q9Y3E7 222 aa14.52□□□□□ -0.09
HIF3A-217ENST00000600236 PITPNM2Q9BZ72 1349 aa14.51□□□□□ -0.09
HIF3A-217ENST00000600236 BEND3Q5T5X7 828 aa14.51□□□□□ -0.09
HIF3A-217ENST00000600236 CCDC102AQ96A19 550 aa14.51□□□□□ -0.09
HIF3A-217ENST00000600236 GMLQ99445 158 aa14.51□□□□□ -0.09
HIF3A-217ENST00000600236 F6X3S4 739 aa14.5□□□□□ -0.09
HIF3A-217ENST00000600236 CHRNDQ07001 517 aa14.5□□□□□ -0.09
HIF3A-217ENST00000600236 CDCA5Q96FF9 252 aa14.5□□□□□ -0.09
HIF3A-217ENST00000600236 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
HIF3A-217ENST00000600236 C9orf78Q9NZ63 289 aaPredicted RBP14.5□□□□□ -0.09
HIF3A-217ENST00000600236 HDAC9Q9UKV0 1011 aa14.5□□□□□ -0.09
HIF3A-217ENST00000600236 GRM8O00222 908 aa14.49□□□□□ -0.09
HIF3A-217ENST00000600236 ALDH1L1O75891 902 aa14.49□□□□□ -0.09
HIF3A-217ENST00000600236 ZNF157P51786 506 aaPredicted RBP14.49□□□□□ -0.09
HIF3A-217ENST00000600236 FKBP1BP68106 108 aa14.49□□□□□ -0.09
HIF3A-217ENST00000600236 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
HIF3A-217ENST00000600236 TAF7LQ5H9L4 462 aa14.49□□□□□ -0.09
HIF3A-217ENST00000600236 DACT2Q5SW24 774 aa14.49□□□□□ -0.09
HIF3A-217ENST00000600236 DLK2Q6UY11 383 aa14.49□□□□□ -0.09
HIF3A-217ENST00000600236 ASTN2O75129 1339 aaPredicted RBP14.48□□□□□ -0.09
HIF3A-217ENST00000600236 TTLL5Q6EMB2 1281 aa14.48□□□□□ -0.09
HIF3A-217ENST00000600236 SLC4A10Q6U841 1118 aa14.48□□□□□ -0.09
HIF3A-217ENST00000600236 SRCIN1Q9C0H9 1055 aa14.48□□□□□ -0.09
HIF3A-217ENST00000600236 WTIPA6NIX2 430 aaPredicted RBP14.47□□□□□ -0.09
HIF3A-217ENST00000600236 NF2P35240 595 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 FOXO4P98177 505 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 LMBR1LQ6UX01 489 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 ZNF804AQ7Z570 1209 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 TXNRD3Q86VQ6 643 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 TSKSQ9UJT2 592 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 SCN9AQ15858 1988 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 MYH3P11055 1940 aa14.47□□□□□ -0.09
HIF3A-217ENST00000600236 GTF2IP78347 998 aa14.46□□□□□ -0.09
HIF3A-217ENST00000600236 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
HIF3A-217ENST00000600236 CD209Q9NNX6 404 aa14.46□□□□□ -0.09
HIF3A-217ENST00000600236 CNNM1Q9NRU3 951 aa14.46□□□□□ -0.09
HIF3A-217ENST00000600236 FAM155AB1AL88 458 aaPredicted RBP14.45□□□□□ -0.1
HIF3A-217ENST00000600236 WNT10BO00744 389 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 TAF5LO75529 589 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 SLC10A3P09131 477 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 KLRK1P26718 216 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 NBPF9Q3BBW0 867 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 LDHAL6AQ6ZMR3 332 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 C15orf52Q6ZUT6 534 aaKnown RBP14.45□□□□□ -0.1
HIF3A-217ENST00000600236 APOBEC3FQ8IUX4 373 aaKnown RBP14.45□□□□□ -0.1
HIF3A-217ENST00000600236 KIAA0825Q8IV33 1275 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 ABHD8Q96I13 439 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 MXD3Q9BW11 206 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 SAGE1Q9NXZ1 904 aa14.45□□□□□ -0.1
HIF3A-217ENST00000600236 E9PSI1 815 aa14.44□□□□□ -0.1
HIF3A-217ENST00000600236 KIF23Q02241 960 aaPredicted RBP14.44□□□□□ -0.1
HIF3A-217ENST00000600236 TTLL12Q14166 644 aaPredicted RBP14.44□□□□□ -0.1
HIF3A-217ENST00000600236 ZNF521Q96K83 1311 aa14.43□□□□□ -0.1
HIF3A-217ENST00000600236 PSME4Q14997 1843 aa14.43□□□□□ -0.1
HIF3A-217ENST00000600236 SASH1O94885 1247 aa14.43□□□□□ -0.1
HIF3A-217ENST00000600236 HELBQ8NG08 1087 aaPredicted RBP14.43□□□□□ -0.1
HIF3A-217ENST00000600236 ZIC5Q96T25 663 aa14.43□□□□□ -0.1
HIF3A-217ENST00000600236 CACNA1FO60840 1977 aa14.43□□□□□ -0.1
HIF3A-217ENST00000600236 PTPRCP08575 1304 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 MYO1BO43795 1136 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 PLIN1O60240 522 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 DLGAP5Q15398 846 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 EPHA10Q5JZY3 1008 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 RASAL3Q86YV0 1011 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 ZNF594Q96JF6 807 aaPredicted RBP14.42□□□□□ -0.1
HIF3A-217ENST00000600236 SPEF2Q9C093 1822 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 PAPPA2Q9BXP8 1791 aa14.42□□□□□ -0.1
HIF3A-217ENST00000600236 IL1R1P14778 569 aa14.41□□□□□ -0.1
HIF3A-217ENST00000600236 FKBP1AP62942 108 aaKnown RBP14.41□□□□□ -0.1
HIF3A-217ENST00000600236 ARMC9Q7Z3E5 817 aa14.41□□□□□ -0.1
HIF3A-217ENST00000600236 PCNTO95613 3336 aa14.41□□□□□ -0.1
HIF3A-217ENST00000600236 IRS2Q9Y4H2 1338 aa14.41□□□□□ -0.1
HIF3A-217ENST00000600236 COL1A1P02452 1464 aaPredicted RBP14.4□□□□□ -0.1
HIF3A-217ENST00000600236 SNAP23O00161 211 aa14.4□□□□□ -0.1
HIF3A-217ENST00000600236 UBE4AQ14139 1066 aa14.4□□□□□ -0.1
HIF3A-217ENST00000600236 MRPL50Q8N5N7 158 aaKnown RBP14.4□□□□□ -0.1
HIF3A-217ENST00000600236 SUCLG2Q96I99 432 aa14.4□□□□□ -0.1
HIF3A-217ENST00000600236 RNF186Q9NXI6 227 aa14.4□□□□□ -0.1
HIF3A-217ENST00000600236 SCAF8Q9UPN6 1271 aaKnown RBP14.4□□□□□ -0.1
HIF3A-217ENST00000600236 UTYO14607 1347 aa14.4□□□□□ -0.1
HIF3A-217ENST00000600236 MROH5Q6ZUA9 1318 aa14.4□□□□□ -0.1
HIF3A-217ENST00000600236 CCDC85CA6NKD9 419 aa14.39□□□□□ -0.11
HIF3A-217ENST00000600236 F8W031 263 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms