RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
VRK3-219ENST00000600137 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
VRK3-219ENST00000600137 ZNF646O15015 1829 aaPredicted RBP17.07■□□□□ 0.32
VRK3-219ENST00000600137 SURF6O75683 361 aaKnown RBP17.06■□□□□ 0.32
VRK3-219ENST00000600137 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
VRK3-219ENST00000600137 FBXO33Q7Z6M2 555 aa17.06■□□□□ 0.32
VRK3-219ENST00000600137 ZNF784Q8NCA9 323 aaPredicted RBP17.06■□□□□ 0.32
VRK3-219ENST00000600137 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
VRK3-219ENST00000600137 COA1Q9GZY4 146 aa17.05■□□□□ 0.32
VRK3-219ENST00000600137 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
VRK3-219ENST00000600137 PSME4Q14997 1843 aa17.05■□□□□ 0.32
VRK3-219ENST00000600137 RAD17O75943 681 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 IL1R1P14778 569 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 GYG1P46976 350 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 KCNJ4P48050 445 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 TIMM10P62072 90 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 PUM3Q15397 648 aaKnown RBP17.04■□□□□ 0.32
VRK3-219ENST00000600137 PODNQ7Z5L7 613 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 LPIN2Q92539 896 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
VRK3-219ENST00000600137 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
VRK3-219ENST00000600137 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
VRK3-219ENST00000600137 GPC2Q8N158 579 aa17.03■□□□□ 0.32
VRK3-219ENST00000600137 TDRD7Q8NHU6 1098 aaKnown RBP17.03■□□□□ 0.32
VRK3-219ENST00000600137 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
VRK3-219ENST00000600137 WDR90Q96KV7 1748 aa17.03■□□□□ 0.32
VRK3-219ENST00000600137 PSMD14O00487 310 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 VIL1P09327 827 aaKnown RBP17.02■□□□□ 0.32
VRK3-219ENST00000600137 ADORA1P30542 326 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 BCAMP50895 628 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 EIF6P56537 245 aaKnown RBP17.02■□□□□ 0.32
VRK3-219ENST00000600137 AAMPQ13685 434 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 ATP2B3Q16720 1220 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 CIAPIN1Q6FI81 312 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 GPR108Q9NPR9 543 aa17.02■□□□□ 0.32
VRK3-219ENST00000600137 HMMRO75330 724 aa17.01■□□□□ 0.31
VRK3-219ENST00000600137 HIBADHP31937 336 aaKnown RBP17.01■□□□□ 0.31
VRK3-219ENST00000600137 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
VRK3-219ENST00000600137 GMLQ99445 158 aa17.01■□□□□ 0.31
VRK3-219ENST00000600137 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
VRK3-219ENST00000600137 ARAP2Q8WZ64 1704 aa17.01■□□□□ 0.31
VRK3-219ENST00000600137 A0A1B0GUL7 405 aa17■□□□□ 0.31
VRK3-219ENST00000600137 ZBTB22O15209 634 aa17■□□□□ 0.31
VRK3-219ENST00000600137 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
VRK3-219ENST00000600137 SCNN1DP51172 638 aa17■□□□□ 0.31
VRK3-219ENST00000600137 DACT2Q5SW24 774 aa17■□□□□ 0.31
VRK3-219ENST00000600137 RRAGCQ9HB90 399 aa17■□□□□ 0.31
VRK3-219ENST00000600137 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
VRK3-219ENST00000600137 GJA3Q9Y6H8 435 aa17■□□□□ 0.31
VRK3-219ENST00000600137 ZNF609O15014 1411 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 KIF3CO14782 793 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 SLC5A1P13866 664 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 TNIP1Q15025 636 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 TNNI3KQ59H18 835 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 ZNF804AQ7Z570 1209 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 RHPN1Q8TCX5 695 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
VRK3-219ENST00000600137 XAGE2Q96GT9 111 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 FPGT-TNNI3KV9GXZ4 949 aa16.99■□□□□ 0.31
VRK3-219ENST00000600137 FAM205AQ6ZU69 1335 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 G3V3G9 751 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 PHKA1P46020 1223 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 STRIP1Q5VSL9 837 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 MXD3Q9BW11 206 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 SCN4AP35499 1836 aa16.98■□□□□ 0.31
VRK3-219ENST00000600137 SHTN1A0MZ66 631 aa16.97■□□□□ 0.31
VRK3-219ENST00000600137 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
VRK3-219ENST00000600137 GMPSP49915 693 aaPredicted RBP16.97■□□□□ 0.31
VRK3-219ENST00000600137 GTF2IP78347 998 aa16.97■□□□□ 0.31
VRK3-219ENST00000600137 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
VRK3-219ENST00000600137 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
VRK3-219ENST00000600137 HSP90AB4PQ58FF6 505 aa16.97■□□□□ 0.31
VRK3-219ENST00000600137 CCDC102BQ68D86 513 aa16.97■□□□□ 0.31
VRK3-219ENST00000600137 TTLL5Q6EMB2 1281 aa16.97■□□□□ 0.31
VRK3-219ENST00000600137 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
VRK3-219ENST00000600137 CERS5Q8N5B7 392 aa16.97■□□□□ 0.31
VRK3-219ENST00000600137 GPBP1L1Q9HC44 474 aaPredicted RBP16.97■□□□□ 0.31
VRK3-219ENST00000600137 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
VRK3-219ENST00000600137 EPS15P42566 896 aa16.96■□□□□ 0.31
VRK3-219ENST00000600137 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
VRK3-219ENST00000600137 ERC1Q8IUD2 1116 aa16.96■□□□□ 0.31
VRK3-219ENST00000600137 DPF2Q92785 391 aa16.96■□□□□ 0.31
VRK3-219ENST00000600137 KIF1BPQ96EK5 621 aa16.96■□□□□ 0.31
VRK3-219ENST00000600137 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
VRK3-219ENST00000600137 GPRC5DQ9NZD1 345 aa16.96■□□□□ 0.31
VRK3-219ENST00000600137 IQSEC3Q9UPP2 1182 aaPredicted RBP16.96■□□□□ 0.31
VRK3-219ENST00000600137 COL1A1P02452 1464 aaPredicted RBP16.95■□□□□ 0.3
VRK3-219ENST00000600137 IGHDP01880 384 aa16.95■□□□□ 0.3
VRK3-219ENST00000600137 NEUROD6Q96NK8 337 aa16.95■□□□□ 0.3
VRK3-219ENST00000600137 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
VRK3-219ENST00000600137 CCDC8Q9H0W5 538 aaPredicted RBP16.95■□□□□ 0.3
VRK3-219ENST00000600137 TAF1DQ9H5J8 278 aaPredicted RBP16.95■□□□□ 0.3
VRK3-219ENST00000600137 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms