RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 USP17L3A6NCW0 530 aa17.57■□□□□ 0.4
IRF3-225ENST00000600022 USP17L4A6NCW7 530 aa17.57■□□□□ 0.4
IRF3-225ENST00000600022 ATP2B4P23634 1241 aa17.57■□□□□ 0.4
IRF3-225ENST00000600022 KLRK1P26718 216 aa17.57■□□□□ 0.4
IRF3-225ENST00000600022 USP17L1Q7RTZ2 530 aa17.57■□□□□ 0.4
IRF3-225ENST00000600022 UBE2Q2LH0YL09 131 aa17.56■□□□□ 0.4
IRF3-225ENST00000600022 DDX58O95786 925 aaKnown RBP17.56■□□□□ 0.4
IRF3-225ENST00000600022 PODNQ7Z5L7 613 aa17.56■□□□□ 0.4
IRF3-225ENST00000600022 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
IRF3-225ENST00000600022 ZBED9Q6R2W3 1325 aa17.55■□□□□ 0.4
IRF3-225ENST00000600022 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
IRF3-225ENST00000600022 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
IRF3-225ENST00000600022 CALD1Q05682 793 aaKnown RBP17.55■□□□□ 0.4
IRF3-225ENST00000600022 DACT2Q5SW24 774 aa17.55■□□□□ 0.4
IRF3-225ENST00000600022 BSDC1Q9NW68 430 aaPredicted RBP17.55■□□□□ 0.4
IRF3-225ENST00000600022 H7C1W4 665 aa17.54■□□□□ 0.4
IRF3-225ENST00000600022 SNAP23O00161 211 aa17.54■□□□□ 0.4
IRF3-225ENST00000600022 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
IRF3-225ENST00000600022 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
IRF3-225ENST00000600022 FBXW7Q969H0 707 aa17.54■□□□□ 0.4
IRF3-225ENST00000600022 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
IRF3-225ENST00000600022 CDC5LQ99459 802 aaKnown RBP17.53■□□□□ 0.4
IRF3-225ENST00000600022 SAGE1Q9NXZ1 904 aa17.53■□□□□ 0.4
IRF3-225ENST00000600022 ZNF609O15014 1411 aa17.53■□□□□ 0.4
IRF3-225ENST00000600022 SASH1O94885 1247 aa17.52■□□□□ 0.4
IRF3-225ENST00000600022 CASP7P55210 303 aa17.52■□□□□ 0.4
IRF3-225ENST00000600022 WWC1Q8IX03 1113 aa17.52■□□□□ 0.4
IRF3-225ENST00000600022 WNT10BO00744 389 aa17.51■□□□□ 0.39
IRF3-225ENST00000600022 SOX10P56693 466 aa17.51■□□□□ 0.39
IRF3-225ENST00000600022 MKRN3Q13064 507 aaKnown RBP17.51■□□□□ 0.39
IRF3-225ENST00000600022 TWISTNBQ3B726 338 aaPredicted RBP17.51■□□□□ 0.39
IRF3-225ENST00000600022 FZD1Q9UP38 647 aa17.51■□□□□ 0.39
IRF3-225ENST00000600022 MED23Q9ULK4 1368 aa17.51■□□□□ 0.39
IRF3-225ENST00000600022 PSME4Q14997 1843 aa17.5■□□□□ 0.39
IRF3-225ENST00000600022 SPEF2Q9C093 1822 aa17.5■□□□□ 0.39
IRF3-225ENST00000600022 TBC1D8O95759 1140 aa17.5■□□□□ 0.39
IRF3-225ENST00000600022 PRKG1Q13976 671 aa17.5■□□□□ 0.39
IRF3-225ENST00000600022 GCKRQ14397 625 aa17.5■□□□□ 0.39
IRF3-225ENST00000600022 PCDHAC2Q9Y5I4 1007 aa17.5■□□□□ 0.39
IRF3-225ENST00000600022 PITPNM2Q9BZ72 1349 aa17.49■□□□□ 0.39
IRF3-225ENST00000600022 SLC34A2O95436 690 aa17.49■□□□□ 0.39
IRF3-225ENST00000600022 ITGA6P23229 1130 aa17.49■□□□□ 0.39
IRF3-225ENST00000600022 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
IRF3-225ENST00000600022 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
IRF3-225ENST00000600022 KIAA0825Q8IV33 1275 aa17.49■□□□□ 0.39
IRF3-225ENST00000600022 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
IRF3-225ENST00000600022 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
IRF3-225ENST00000600022 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
IRF3-225ENST00000600022 ZNF804BA4D1E1 1349 aa17.48■□□□□ 0.39
IRF3-225ENST00000600022 CSF1RP07333 972 aa17.48■□□□□ 0.39
IRF3-225ENST00000600022 GTF2IP78347 998 aa17.48■□□□□ 0.39
IRF3-225ENST00000600022 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
IRF3-225ENST00000600022 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
IRF3-225ENST00000600022 COA1Q9GZY4 146 aa17.48■□□□□ 0.39
IRF3-225ENST00000600022 R3HDMLQ9H3Y0 253 aa17.48■□□□□ 0.39
IRF3-225ENST00000600022 TAF5LO75529 589 aa17.47■□□□□ 0.39
IRF3-225ENST00000600022 FKBP1BP68106 108 aa17.47■□□□□ 0.39
IRF3-225ENST00000600022 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
IRF3-225ENST00000600022 FLIIQ13045 1269 aa17.47■□□□□ 0.39
IRF3-225ENST00000600022 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
IRF3-225ENST00000600022 LEMD3Q9Y2U8 911 aa17.47■□□□□ 0.39
IRF3-225ENST00000600022 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
IRF3-225ENST00000600022 CHRNDQ07001 517 aa17.46■□□□□ 0.39
IRF3-225ENST00000600022 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
IRF3-225ENST00000600022 OGFOD1Q8N543 542 aa17.46■□□□□ 0.39
IRF3-225ENST00000600022 CERS5Q8N5B7 392 aa17.46■□□□□ 0.39
IRF3-225ENST00000600022 ZBED3Q96IU2 234 aaPredicted RBP17.46■□□□□ 0.39
IRF3-225ENST00000600022 PLA2G12BQ9BX93 195 aa17.46■□□□□ 0.39
IRF3-225ENST00000600022 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
IRF3-225ENST00000600022 AKAP11Q9UKA4 1901 aa17.46■□□□□ 0.39
IRF3-225ENST00000600022 AOX1Q06278 1338 aa17.46■□□□□ 0.38
IRF3-225ENST00000600022 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.38
IRF3-225ENST00000600022 PAPPA2Q9BXP8 1791 aa17.45■□□□□ 0.38
IRF3-225ENST00000600022 F6X3S4 739 aa17.45■□□□□ 0.38
IRF3-225ENST00000600022 VAMP4O75379 141 aa17.45■□□□□ 0.38
IRF3-225ENST00000600022 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
IRF3-225ENST00000600022 CTU1Q7Z7A3 348 aaKnown RBP17.45■□□□□ 0.38
IRF3-225ENST00000600022 ZNF296Q8WUU4 475 aaPredicted RBP17.45■□□□□ 0.38
IRF3-225ENST00000600022 TM4SF4P48230 202 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 FOXO4P98177 505 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
IRF3-225ENST00000600022 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 DNAAF4Q8WXU2 420 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
IRF3-225ENST00000600022 JAG2Q9Y219 1238 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 MYH3P11055 1940 aa17.44■□□□□ 0.38
IRF3-225ENST00000600022 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
IRF3-225ENST00000600022 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
IRF3-225ENST00000600022 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
IRF3-225ENST00000600022 HPS5Q9UPZ3 1129 aa17.43■□□□□ 0.38
IRF3-225ENST00000600022 ZNF521Q96K83 1311 aa17.43■□□□□ 0.38
IRF3-225ENST00000600022 FANCIQ9NVI1 1328 aa17.43■□□□□ 0.38
IRF3-225ENST00000600022 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
IRF3-225ENST00000600022 LDLRAD1Q5T700 205 aa17.42■□□□□ 0.38
IRF3-225ENST00000600022 REM2Q8IYK8 340 aaPredicted RBP17.42■□□□□ 0.38
IRF3-225ENST00000600022 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
IRF3-225ENST00000600022 MYO3BQ8WXR4 1341 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms