RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
LINC00649-210ENST00000599421 APAF1O14727 1248 aa12.22□□□□□ -0.45
LINC00649-210ENST00000599421 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
LINC00649-210ENST00000599421 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
LINC00649-210ENST00000599421 DUSP27Q5VZP5 1158 aa12.22□□□□□ -0.45
LINC00649-210ENST00000599421 USP17L1Q7RTZ2 530 aa12.22□□□□□ -0.45
LINC00649-210ENST00000599421 SEC31BQ9NQW1 1179 aa12.22□□□□□ -0.45
LINC00649-210ENST00000599421 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
LINC00649-210ENST00000599421 XDHP47989 1333 aa12.21□□□□□ -0.45
LINC00649-210ENST00000599421 HOXB7P09629 217 aa12.21□□□□□ -0.45
LINC00649-210ENST00000599421 HSP90B1P14625 803 aaKnown RBP12.21□□□□□ -0.45
LINC00649-210ENST00000599421 NF2P35240 595 aa12.21□□□□□ -0.45
LINC00649-210ENST00000599421 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
LINC00649-210ENST00000599421 PRAMEF18Q5VWM3 479 aa12.21□□□□□ -0.45
LINC00649-210ENST00000599421 PODNQ7Z5L7 613 aa12.21□□□□□ -0.45
LINC00649-210ENST00000599421 ZBTB38Q8NAP3 1195 aaPredicted RBP12.21□□□□□ -0.45
LINC00649-210ENST00000599421 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.45
LINC00649-210ENST00000599421 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
LINC00649-210ENST00000599421 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
LINC00649-210ENST00000599421 CCDC152Q4G0S7 254 aa12.2□□□□□ -0.46
LINC00649-210ENST00000599421 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
LINC00649-210ENST00000599421 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
LINC00649-210ENST00000599421 HYPKQ9NX55 129 aa12.2□□□□□ -0.46
LINC00649-210ENST00000599421 SZT2Q5T011 3432 aa12.2□□□□□ -0.46
LINC00649-210ENST00000599421 WNT10BO00744 389 aa12.19□□□□□ -0.46
LINC00649-210ENST00000599421 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
LINC00649-210ENST00000599421 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
LINC00649-210ENST00000599421 INTS3Q68E01 1043 aaKnown RBP12.19□□□□□ -0.46
LINC00649-210ENST00000599421 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
LINC00649-210ENST00000599421 MED23Q9ULK4 1368 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 POTEFA5A3E0 1075 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 ELL2O00472 640 aaPredicted RBP12.18□□□□□ -0.46
LINC00649-210ENST00000599421 PDE8AO60658 829 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 PTPN12Q05209 780 aaKnown RBP12.18□□□□□ -0.46
LINC00649-210ENST00000599421 DACT2Q5SW24 774 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 SPRYD7Q5W111 196 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
LINC00649-210ENST00000599421 TRIM17Q9Y577 477 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 ECM29Q5VYK3 1845 aa12.18□□□□□ -0.46
LINC00649-210ENST00000599421 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 PCCAP05165 728 aaPredicted RBP12.17□□□□□ -0.46
LINC00649-210ENST00000599421 MMP14P50281 582 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 CCDC27Q2M243 656 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 LDLRAD1Q5T700 205 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 OTOP1Q7RTM1 612 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 RIC3Q7Z5B4 369 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 APOBEC3FQ8IUX4 373 aaKnown RBP12.17□□□□□ -0.46
LINC00649-210ENST00000599421 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 MYD88Q99836 296 aa12.17□□□□□ -0.46
LINC00649-210ENST00000599421 MANSC4A6NHS7 340 aaPredicted RBP12.16□□□□□ -0.46
LINC00649-210ENST00000599421 INHBEP58166 350 aa12.16□□□□□ -0.46
LINC00649-210ENST00000599421 STRIP1Q5VSL9 837 aa12.16□□□□□ -0.46
LINC00649-210ENST00000599421 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
LINC00649-210ENST00000599421 MXD3Q9BW11 206 aa12.16□□□□□ -0.46
LINC00649-210ENST00000599421 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
LINC00649-210ENST00000599421 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
LINC00649-210ENST00000599421 RANBP2P49792 3224 aaKnown RBP12.15□□□□□ -0.46
LINC00649-210ENST00000599421 SASH1O94885 1247 aa12.15□□□□□ -0.46
LINC00649-210ENST00000599421 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00649-210ENST00000599421 PRKG1Q13976 671 aa12.15□□□□□ -0.46
LINC00649-210ENST00000599421 IFNL1Q8IU54 200 aa12.15□□□□□ -0.46
LINC00649-210ENST00000599421 TSPYL6Q8N831 410 aa12.15□□□□□ -0.46
LINC00649-210ENST00000599421 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
LINC00649-210ENST00000599421 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
LINC00649-210ENST00000599421 CACNA1FO60840 1977 aa12.15□□□□□ -0.46
LINC00649-210ENST00000599421 WTIPA6NIX2 430 aaPredicted RBP12.14□□□□□ -0.47
LINC00649-210ENST00000599421 ZBTB48P10074 688 aaPredicted RBP12.14□□□□□ -0.47
LINC00649-210ENST00000599421 WDR63Q8IWG1 891 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 ARMC5Q96C12 935 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 ERO1AQ96HE7 468 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
LINC00649-210ENST00000599421 MINPP1Q9UNW1 487 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
LINC00649-210ENST00000599421 ZNF521Q96K83 1311 aa12.13□□□□□ -0.47
LINC00649-210ENST00000599421 IGF2BP3O00425 579 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC00649-210ENST00000599421 CCT4P50991 539 aaKnown RBP12.13□□□□□ -0.47
LINC00649-210ENST00000599421 CTSWP56202 376 aa12.13□□□□□ -0.47
LINC00649-210ENST00000599421 GNAI1P63096 354 aa12.13□□□□□ -0.47
LINC00649-210ENST00000599421 MAP3K11Q16584 847 aa12.13□□□□□ -0.47
LINC00649-210ENST00000599421 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
LINC00649-210ENST00000599421 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
LINC00649-210ENST00000599421 ZBED3Q96IU2 234 aaPredicted RBP12.13□□□□□ -0.47
LINC00649-210ENST00000599421 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
LINC00649-210ENST00000599421 CUL9Q8IWT3 2517 aa12.12□□□□□ -0.47
LINC00649-210ENST00000599421 E9PSI1 815 aa12.12□□□□□ -0.47
LINC00649-210ENST00000599421 EN2P19622 333 aaPredicted RBP12.12□□□□□ -0.47
LINC00649-210ENST00000599421 CALD1Q05682 793 aaKnown RBP12.12□□□□□ -0.47
LINC00649-210ENST00000599421 CD99L2Q8TCZ2 262 aa12.12□□□□□ -0.47
LINC00649-210ENST00000599421 WNK4Q96J92 1243 aa12.12□□□□□ -0.47
LINC00649-210ENST00000599421 DEFB129Q9H1M3 183 aa12.12□□□□□ -0.47
LINC00649-210ENST00000599421 FZD1Q9UP38 647 aa12.12□□□□□ -0.47
LINC00649-210ENST00000599421 SSC5DA1L4H1 1573 aa12.12□□□□□ -0.47
LINC00649-210ENST00000599421 OTOFQ9HC10 1997 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms