RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 ALG2Q9H553 416 aa10.73□□□□□ -0.69
LINC00343-207ENST00000599179 NEUROD4Q9HD90 331 aa10.73□□□□□ -0.69
LINC00343-207ENST00000599179 COG6Q9Y2V7 657 aa10.73□□□□□ -0.69
LINC00343-207ENST00000599179 MYOM2P54296 1465 aa10.73□□□□□ -0.69
LINC00343-207ENST00000599179 GCC2Q8IWJ2 1684 aa10.73□□□□□ -0.69
LINC00343-207ENST00000599179 TXLNAP40222 546 aa10.72□□□□□ -0.69
LINC00343-207ENST00000599179 NCOA4Q13772 614 aa10.72□□□□□ -0.69
LINC00343-207ENST00000599179 TRIM50Q86XT4 487 aa10.72□□□□□ -0.69
LINC00343-207ENST00000599179 PARP3Q9Y6F1 533 aa10.72□□□□□ -0.69
LINC00343-207ENST00000599179 DAPK1P53355 1430 aa10.72□□□□□ -0.69
LINC00343-207ENST00000599179 RALGAPBQ86X10 1494 aa10.72□□□□□ -0.69
LINC00343-207ENST00000599179 EML1O00423 815 aa10.71□□□□□ -0.69
LINC00343-207ENST00000599179 METP08581 1390 aa10.71□□□□□ -0.69
LINC00343-207ENST00000599179 NOS2P35228 1153 aa10.71□□□□□ -0.69
LINC00343-207ENST00000599179 XRN1Q8IZH2 1706 aaKnown RBP10.71□□□□□ -0.69
LINC00343-207ENST00000599179 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.71□□□□□ -0.69
LINC00343-207ENST00000599179 ZDHHC1Q8WTX9 485 aa10.71□□□□□ -0.69
LINC00343-207ENST00000599179 TRIM11Q96F44 468 aa10.71□□□□□ -0.69
LINC00343-207ENST00000599179 PLVAPQ9BX97 442 aa10.71□□□□□ -0.69
LINC00343-207ENST00000599179 ANKRD30AQ9BXX3 1397 aa10.71□□□□□ -0.69
LINC00343-207ENST00000599179 MYO5BQ9ULV0 1848 aa10.7□□□□□ -0.7
LINC00343-207ENST00000599179 SIN3BO75182 1162 aa10.7□□□□□ -0.7
LINC00343-207ENST00000599179 SYT9Q86SS6 491 aa10.7□□□□□ -0.7
LINC00343-207ENST00000599179 STRN4Q9NRL3 753 aa10.7□□□□□ -0.7
LINC00343-207ENST00000599179 ZNF232Q9UNY5 417 aa10.7□□□□□ -0.7
LINC00343-207ENST00000599179 UNC13BO14795 1591 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 EPHA4P54764 986 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 R3HDM1Q15032 1099 aaKnown RBP10.69□□□□□ -0.7
LINC00343-207ENST00000599179 UNC5CLQ8IV45 518 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 SLC9A9Q8IVB4 645 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 Q8N3U1 123 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 GLI3P10071 1580 aa10.69□□□□□ -0.7
LINC00343-207ENST00000599179 SERTM1A2A2V5 107 aa10.68□□□□□ -0.7
LINC00343-207ENST00000599179 ADARB2-AS1A8MUL3 147 aa10.68□□□□□ -0.7
LINC00343-207ENST00000599179 PRRT3Q5FWE3 981 aa10.68□□□□□ -0.7
LINC00343-207ENST00000599179 LRRC69Q6ZNQ3 347 aa10.68□□□□□ -0.7
LINC00343-207ENST00000599179 CHMP3Q9Y3E7 222 aa10.68□□□□□ -0.7
LINC00343-207ENST00000599179 CROCC2H7BZ55 1655 aa10.68□□□□□ -0.7
LINC00343-207ENST00000599179 LAMC1P11047 1609 aa10.67□□□□□ -0.7
LINC00343-207ENST00000599179 GATA4P43694 442 aa10.67□□□□□ -0.7
LINC00343-207ENST00000599179 ATP1A2P50993 1020 aa10.67□□□□□ -0.7
LINC00343-207ENST00000599179 MDFIQ99750 246 aa10.67□□□□□ -0.7
LINC00343-207ENST00000599179 COL22A1Q8NFW1 1626 aaPredicted RBP10.66□□□□□ -0.7
LINC00343-207ENST00000599179 XPCQ01831 940 aaPredicted RBP10.66□□□□□ -0.7
LINC00343-207ENST00000599179 RHPN1Q8TCX5 695 aa10.66□□□□□ -0.7
LINC00343-207ENST00000599179 TNFRSF25Q93038 417 aa10.66□□□□□ -0.7
LINC00343-207ENST00000599179 NRXN3Q9Y4C0 1643 aa10.66□□□□□ -0.7
LINC00343-207ENST00000599179 SLIT2O94813 1529 aa10.65□□□□□ -0.7
LINC00343-207ENST00000599179 NALCNQ8IZF0 1738 aa10.65□□□□□ -0.7
LINC00343-207ENST00000599179 RAD21O60216 631 aa10.65□□□□□ -0.7
LINC00343-207ENST00000599179 PSMA6P60900 246 aaKnown RBP10.65□□□□□ -0.7
LINC00343-207ENST00000599179 C1orf53Q5VUE5 145 aa10.65□□□□□ -0.7
LINC00343-207ENST00000599179 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
LINC00343-207ENST00000599179 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
LINC00343-207ENST00000599179 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
LINC00343-207ENST00000599179 PLEKHM2Q8IWE5 1019 aa10.64□□□□□ -0.71
LINC00343-207ENST00000599179 TNS4Q8IZW8 715 aa10.64□□□□□ -0.71
LINC00343-207ENST00000599179 ANKRD50Q9ULJ7 1429 aa10.64□□□□□ -0.71
LINC00343-207ENST00000599179 NPHP3Q7Z494 1330 aa10.63□□□□□ -0.71
LINC00343-207ENST00000599179 PTPN23Q9H3S7 1636 aa10.63□□□□□ -0.71
LINC00343-207ENST00000599179 APBA3O96018 575 aa10.63□□□□□ -0.71
LINC00343-207ENST00000599179 HIRAP54198 1017 aaPredicted RBP10.63□□□□□ -0.71
LINC00343-207ENST00000599179 DOC2BQ14184 412 aa10.63□□□□□ -0.71
LINC00343-207ENST00000599179 DEPDC4Q8N2C3 294 aa10.63□□□□□ -0.71
LINC00343-207ENST00000599179 ROBO2Q9HCK4 1378 aa10.63□□□□□ -0.71
LINC00343-207ENST00000599179 UTRNP46939 3433 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 PXDNQ92626 1479 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 FOXO3O43524 673 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 VPS72Q15906 364 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 TPCN2Q8NHX9 752 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 C7orf43Q8WVR3 580 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 NACC1Q96RE7 527 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 SEMA6BQ9H3T3 888 aa10.62□□□□□ -0.71
LINC00343-207ENST00000599179 CCDC9Q9Y3X0 531 aaKnown RBP10.62□□□□□ -0.71
LINC00343-207ENST00000599179 SPHKAPQ2M3C7 1700 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 VPS8Q8N3P4 1428 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 M0R082 166 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 M0R2N6 131 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 SPEM2Q0P670 501 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
LINC00343-207ENST00000599179 TBCELQ5QJ74 424 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 ZNF417Q8TAU3 575 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 ZNF587Q96SQ5 575 aaPredicted RBP10.61□□□□□ -0.71
LINC00343-207ENST00000599179 ADGRL2O95490 1459 aa10.61□□□□□ -0.71
LINC00343-207ENST00000599179 SFSWAPQ12872 951 aaKnown RBP10.6□□□□□ -0.71
LINC00343-207ENST00000599179 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
LINC00343-207ENST00000599179 BRWD3Q6RI45 1802 aa10.6□□□□□ -0.71
LINC00343-207ENST00000599179 USP17L3A6NCW0 530 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 USP17L4A6NCW7 530 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 ADH7P40394 386 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 KCNQ4P56696 695 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 USP17L2Q6R6M4 530 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 USP17L1Q7RTZ2 530 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 SLC30A3Q99726 388 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 BRD7Q9NPI1 651 aa10.59□□□□□ -0.71
LINC00343-207ENST00000599179 EZH2Q15910 746 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms