RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 CHGBP05060 677 aa28.28■■■□□ 2.12
SYMPK-212ENST00000598896 NPR1P16066 1061 aa28.28■■■□□ 2.12
SYMPK-212ENST00000598896 SGSM2O43147 1006 aa28.27■■■□□ 2.12
SYMPK-212ENST00000598896 FAM227BQ96M60 508 aa28.27■■■□□ 2.12
SYMPK-212ENST00000598896 RFX7Q2KHR2 1363 aa28.27■■■□□ 2.12
SYMPK-212ENST00000598896 REC8O95072 547 aa28.27■■■□□ 2.12
SYMPK-212ENST00000598896 UQCRFS1P1P0C7P4 283 aa28.27■■■□□ 2.12
SYMPK-212ENST00000598896 GYG1P46976 350 aa28.27■■■□□ 2.12
SYMPK-212ENST00000598896 USP26Q9BXU7 913 aa28.27■■■□□ 2.12
SYMPK-212ENST00000598896 ZNF804BA4D1E1 1349 aa28.26■■■□□ 2.11
SYMPK-212ENST00000598896 EIF5BO60841 1220 aaKnown RBP28.26■■■□□ 2.11
SYMPK-212ENST00000598896 ANP32AP39687 249 aaKnown RBP28.26■■■□□ 2.11
SYMPK-212ENST00000598896 KCNJ4P48050 445 aa28.26■■■□□ 2.11
SYMPK-212ENST00000598896 RASGRF1Q13972 1273 aa28.26■■■□□ 2.11
SYMPK-212ENST00000598896 ANKIB1Q9P2G1 1089 aa28.26■■■□□ 2.11
SYMPK-212ENST00000598896 RBM25P49756 843 aaKnown RBP28.25■■■□□ 2.11
SYMPK-212ENST00000598896 NMIQ13287 307 aaPredicted RBP28.25■■■□□ 2.11
SYMPK-212ENST00000598896 MASTLQ96GX5 879 aa28.25■■■□□ 2.11
SYMPK-212ENST00000598896 HMG20BQ9P0W2 317 aa28.25■■■□□ 2.11
SYMPK-212ENST00000598896 CACNA1SQ13698 1873 aa28.25■■■□□ 2.11
SYMPK-212ENST00000598896 XDHP47989 1333 aa28.25■■■□□ 2.11
SYMPK-212ENST00000598896 IRS2Q9Y4H2 1338 aa28.25■■■□□ 2.11
SYMPK-212ENST00000598896 HIP1O00291 1037 aa28.25■■■□□ 2.11
SYMPK-212ENST00000598896 LTBP1Q14766 1721 aa28.25■■■□□ 2.11
SYMPK-212ENST00000598896 A0A0D9SFI3 127 aa28.24■■■□□ 2.11
SYMPK-212ENST00000598896 PPEF1O14829 653 aaPredicted RBP28.24■■■□□ 2.11
SYMPK-212ENST00000598896 GPSM2P81274 684 aa28.24■■■□□ 2.11
SYMPK-212ENST00000598896 C2CD5Q86YS7 1000 aa28.24■■■□□ 2.11
SYMPK-212ENST00000598896 C10orf71Q711Q0 1435 aa28.24■■■□□ 2.11
SYMPK-212ENST00000598896 ZBTB7AO95365 584 aa28.23■■■□□ 2.11
SYMPK-212ENST00000598896 CYP2E1P05181 493 aaPredicted RBP28.23■■■□□ 2.11
SYMPK-212ENST00000598896 FAM84BQ96KN1 310 aaPredicted RBP28.23■■■□□ 2.11
SYMPK-212ENST00000598896 ANO2Q9NQ90 1003 aa28.23■■■□□ 2.11
SYMPK-212ENST00000598896 MYO5AQ9Y4I1 1855 aaKnown RBP28.23■■■□□ 2.11
SYMPK-212ENST00000598896 R3HDM1Q15032 1099 aaKnown RBP28.23■■■□□ 2.11
SYMPK-212ENST00000598896 SPATA5Q8NB90 893 aa28.23■■■□□ 2.11
SYMPK-212ENST00000598896 SLFNL1Q499Z3 407 aa28.22■■■□□ 2.11
SYMPK-212ENST00000598896 TXNRD3Q86VQ6 643 aa28.22■■■□□ 2.11
SYMPK-212ENST00000598896 RUFY2Q8WXA3 655 aa28.22■■■□□ 2.11
SYMPK-212ENST00000598896 CHRNA5P30532 468 aa28.21■■■□□ 2.11
SYMPK-212ENST00000598896 CAVIN4Q5BKX8 364 aa28.21■■■□□ 2.11
SYMPK-212ENST00000598896 NSFL1CQ9UNZ2 370 aaKnown RBP28.21■■■□□ 2.11
SYMPK-212ENST00000598896 LEMD3Q9Y2U8 911 aa28.21■■■□□ 2.11
SYMPK-212ENST00000598896 COL1A1P02452 1464 aaPredicted RBP28.21■■■□□ 2.11
SYMPK-212ENST00000598896 ALDH1B1P30837 517 aa28.21■■■□□ 2.11
SYMPK-212ENST00000598896 TMC4Q7Z404 712 aa28.21■■■□□ 2.11
SYMPK-212ENST00000598896 IQSEC3Q9UPP2 1182 aaPredicted RBP28.21■■■□□ 2.11
SYMPK-212ENST00000598896 H0YIN7 160 aa28.2■■■□□ 2.1
SYMPK-212ENST00000598896 FBXO33Q7Z6M2 555 aa28.2■■■□□ 2.1
SYMPK-212ENST00000598896 ZNF622Q969S3 477 aaKnown RBP eCLIP28.2■■■□□ 2.13e-7■□□□□ 10.5
SYMPK-212ENST00000598896 ATP6V0A2Q9Y487 856 aa28.2■■■□□ 2.1
SYMPK-212ENST00000598896 MYH7P12883 1935 aa28.2■■■□□ 2.1
SYMPK-212ENST00000598896 SP8Q8IXZ3 490 aa28.19■■■□□ 2.1
SYMPK-212ENST00000598896 PIH1D3Q9NQM4 214 aaKnown RBP28.19■■■□□ 2.1
SYMPK-212ENST00000598896 MED23Q9ULK4 1368 aa28.19■■■□□ 2.1
SYMPK-212ENST00000598896 OLFM4Q6UX06 510 aa28.19■■■□□ 2.1
SYMPK-212ENST00000598896 GPR101Q96P66 508 aaPredicted RBP28.19■■■□□ 2.1
SYMPK-212ENST00000598896 PODXL2Q9NZ53 605 aa28.19■■■□□ 2.1
SYMPK-212ENST00000598896 DOCK2Q92608 1830 aa28.19■■■□□ 2.1
SYMPK-212ENST00000598896 RAD50Q92878 1312 aa28.18■■■□□ 2.1
SYMPK-212ENST00000598896 STYK1Q6J9G0 422 aa28.18■■■□□ 2.1
SYMPK-212ENST00000598896 SEC62Q99442 399 aaKnown RBP28.18■■■□□ 2.1
SYMPK-212ENST00000598896 KIF2CQ99661 725 aa28.18■■■□□ 2.1
SYMPK-212ENST00000598896 LSG1Q9H089 658 aaKnown RBP28.18■■■□□ 2.1
SYMPK-212ENST00000598896 ZNF589Q86UQ0 364 aaPredicted RBP28.17■■■□□ 2.1
SYMPK-212ENST00000598896 TICAM2Q86XR7 235 aa28.17■■■□□ 2.1
SYMPK-212ENST00000598896 VPS37DQ86XT2 251 aa28.17■■■□□ 2.1
SYMPK-212ENST00000598896 SLX4Q8IY92 1834 aa28.17■■■□□ 2.1
SYMPK-212ENST00000598896 KIF13BQ9NQT8 1826 aa28.17■■■□□ 2.1
SYMPK-212ENST00000598896 UFL1O94874 794 aa28.17■■■□□ 2.1
SYMPK-212ENST00000598896 TTF1Q15361 905 aaPredicted RBP28.17■■■□□ 2.1
SYMPK-212ENST00000598896 MTFR1LQ9H019 292 aa28.17■■■□□ 2.1
SYMPK-212ENST00000598896 ATF5Q9Y2D1 282 aaPredicted RBP28.17■■■□□ 2.1
SYMPK-212ENST00000598896 DLEC1Q9Y238 1755 aa28.16■■■□□ 2.1
SYMPK-212ENST00000598896 MYH13Q9UKX3 1938 aa28.16■■■□□ 2.1
SYMPK-212ENST00000598896 DUOX1Q9NRD9 1551 aa28.16■■■□□ 2.1
SYMPK-212ENST00000598896 HIBADHP31937 336 aaKnown RBP28.16■■■□□ 2.1
SYMPK-212ENST00000598896 GNL3LQ9NVN8 582 aaKnown RBP28.16■■■□□ 2.1
SYMPK-212ENST00000598896 POLLQ9UGP5 575 aa28.16■■■□□ 2.1
SYMPK-212ENST00000598896 GGA1Q9UJY5 639 aa28.16■■■□□ 2.1
SYMPK-212ENST00000598896 RNF113AO15541 343 aaKnown RBP28.15■■■□□ 2.1
SYMPK-212ENST00000598896 ATP2B4P23634 1241 aa28.15■■■□□ 2.1
SYMPK-212ENST00000598896 PRPF40BQ6NWY9 871 aaKnown RBP28.15■■■□□ 2.1
SYMPK-212ENST00000598896 TBC1D16Q8TBP0 767 aa28.15■■■□□ 2.1
SYMPK-212ENST00000598896 GOLGB1Q14789 3259 aaKnown RBP28.14■■■□□ 2.1
SYMPK-212ENST00000598896 PSDA5PKW4 1024 aaPredicted RBP28.14■■■□□ 2.1
SYMPK-212ENST00000598896 PTH1RQ03431 593 aa28.14■■■□□ 2.1
SYMPK-212ENST00000598896 ZMYM1Q5SVZ6 1142 aa28.14■■■□□ 2.1
SYMPK-212ENST00000598896 C15orf52Q6ZUT6 534 aaKnown RBP28.14■■■□□ 2.1
SYMPK-212ENST00000598896 EPB41L2O43491 1005 aaKnown RBP28.12■■■□□ 2.09
SYMPK-212ENST00000598896 IDH1O75874 414 aaKnown RBP28.12■■■□□ 2.09
SYMPK-212ENST00000598896 MCMDC2Q4G0Z9 681 aa28.12■■■□□ 2.09
SYMPK-212ENST00000598896 CCDC129Q6ZRS4 1044 aa28.12■■■□□ 2.09
SYMPK-212ENST00000598896 KIAA1211Q6ZU35 1233 aa28.12■■■□□ 2.09
SYMPK-212ENST00000598896 CCDC171Q6TFL3 1326 aa28.12■■■□□ 2.09
SYMPK-212ENST00000598896 ZFYP08048 801 aaPredicted RBP28.11■■■□□ 2.09
SYMPK-212ENST00000598896 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.11■■■□□ 2.098e-7■■■■□ 21.1
SYMPK-212ENST00000598896 HELLSQ9NRZ9 838 aa28.11■■■□□ 2.09
SYMPK-212ENST00000598896 DENND2AQ9ULE3 1009 aa28.11■■■□□ 2.09
SYMPK-212ENST00000598896 MAST3O60307 1309 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms