RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 DACT2Q5SW24 774 aa20.07■□□□□ 0.8
SMG9-208ENST00000598886 USP17L3A6NCW0 530 aa20.06■□□□□ 0.8
SMG9-208ENST00000598886 USP17L4A6NCW7 530 aa20.06■□□□□ 0.8
SMG9-208ENST00000598886 ITGA6P23229 1130 aa20.06■□□□□ 0.8
SMG9-208ENST00000598886 KLRK1P26718 216 aa20.06■□□□□ 0.8
SMG9-208ENST00000598886 USP17L1Q7RTZ2 530 aa20.06■□□□□ 0.8
SMG9-208ENST00000598886 DCPSQ96C86 337 aaKnown RBP20.06■□□□□ 0.8
SMG9-208ENST00000598886 GBA2Q9HCG7 927 aaPredicted RBP20.06■□□□□ 0.8
SMG9-208ENST00000598886 TSKSQ9UJT2 592 aa20.06■□□□□ 0.8
SMG9-208ENST00000598886 AKAP11Q9UKA4 1901 aa20.06■□□□□ 0.8
SMG9-208ENST00000598886 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
SMG9-208ENST00000598886 CDCA5Q96FF9 252 aa20.05■□□□□ 0.8
SMG9-208ENST00000598886 MXD3Q9BW11 206 aa20.05■□□□□ 0.8
SMG9-208ENST00000598886 MYOZ2Q9NPC6 264 aa20.05■□□□□ 0.8
SMG9-208ENST00000598886 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 PITPNM2Q9BZ72 1349 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 LAMB1P07942 1786 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 ANP32CO43423 234 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 USP17L8P0C7I0 530 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 FOXO4P98177 505 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 NOGQ13253 232 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 SCARF1Q14162 830 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 BEND3Q5T5X7 828 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 ANGEL2Q5VTE6 544 aaKnown RBP20.04■□□□□ 0.8
SMG9-208ENST00000598886 MYH16Q9H6N6 1097 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 ARAP2Q8WZ64 1704 aa20.04■□□□□ 0.8
SMG9-208ENST00000598886 F6X3S4 739 aa20.03■□□□□ 0.8
SMG9-208ENST00000598886 G3V3G9 751 aa20.03■□□□□ 0.8
SMG9-208ENST00000598886 CA12O43570 354 aa20.03■□□□□ 0.8
SMG9-208ENST00000598886 DCAF8Q5TAQ9 597 aa20.03■□□□□ 0.8
SMG9-208ENST00000598886 RGMBQ6NW40 437 aa20.03■□□□□ 0.8
SMG9-208ENST00000598886 ABHD8Q96I13 439 aa20.03■□□□□ 0.8
SMG9-208ENST00000598886 LEMD3Q9Y2U8 911 aa20.03■□□□□ 0.8
SMG9-208ENST00000598886 SALL2Q9Y467 1007 aaPredicted RBP20.03■□□□□ 0.8
SMG9-208ENST00000598886 ZNF804BA4D1E1 1349 aa20.02■□□□□ 0.8
SMG9-208ENST00000598886 IGHMBP2P38935 993 aaKnown RBP20.02■□□□□ 0.8
SMG9-208ENST00000598886 SULF1Q8IWU6 871 aa20.02■□□□□ 0.8
SMG9-208ENST00000598886 BEGAINQ9BUH8 593 aa20.02■□□□□ 0.8
SMG9-208ENST00000598886 COA1Q9GZY4 146 aa20.02■□□□□ 0.8
SMG9-208ENST00000598886 EPHA10Q5JZY3 1008 aa20.01■□□□□ 0.79
SMG9-208ENST00000598886 STRIP1Q5VSL9 837 aa20.01■□□□□ 0.79
SMG9-208ENST00000598886 SLC10A3P09131 477 aa20■□□□□ 0.79
SMG9-208ENST00000598886 CHRNDQ07001 517 aa20■□□□□ 0.79
SMG9-208ENST00000598886 NBPF9Q3BBW0 867 aa20■□□□□ 0.79
SMG9-208ENST00000598886 C2orf69Q8N8R5 385 aa20■□□□□ 0.79
SMG9-208ENST00000598886 MYO3BQ8WXR4 1341 aa20■□□□□ 0.79
SMG9-208ENST00000598886 SNAP23O00161 211 aa19.99■□□□□ 0.79
SMG9-208ENST00000598886 C15orf52Q6ZUT6 534 aaKnown RBP19.99■□□□□ 0.79
SMG9-208ENST00000598886 ZBED3Q96IU2 234 aaPredicted RBP19.99■□□□□ 0.79
SMG9-208ENST00000598886 ANKRD2Q9GZV1 360 aa19.99■□□□□ 0.79
SMG9-208ENST00000598886 SCAF8Q9UPN6 1271 aaKnown RBP19.99■□□□□ 0.79
SMG9-208ENST00000598886 WNT10BO00744 389 aa19.98■□□□□ 0.79
SMG9-208ENST00000598886 KIF23Q02241 960 aaPredicted RBP19.97■□□□□ 0.79
SMG9-208ENST00000598886 RASAL3Q86YV0 1011 aa19.97■□□□□ 0.79
SMG9-208ENST00000598886 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
SMG9-208ENST00000598886 MPHOSPH8Q99549 860 aa19.97■□□□□ 0.79
SMG9-208ENST00000598886 ANKRD18BA2A2Z9 1011 aa19.96■□□□□ 0.79
SMG9-208ENST00000598886 ZNF157P51786 506 aaPredicted RBP19.96■□□□□ 0.79
SMG9-208ENST00000598886 FKBP1BP68106 108 aa19.96■□□□□ 0.79
SMG9-208ENST00000598886 CERS5Q8N5B7 392 aa19.96■□□□□ 0.79
SMG9-208ENST00000598886 KAZALD1Q96I82 304 aa19.96■□□□□ 0.79
SMG9-208ENST00000598886 SAGE1Q9NXZ1 904 aa19.96■□□□□ 0.79
SMG9-208ENST00000598886 GRM8O00222 908 aa19.95■□□□□ 0.78
SMG9-208ENST00000598886 MOB2Q70IA6 237 aa19.95■□□□□ 0.78
SMG9-208ENST00000598886 CD209Q9NNX6 404 aa19.95■□□□□ 0.78
SMG9-208ENST00000598886 TAF5LO75529 589 aa19.94■□□□□ 0.78
SMG9-208ENST00000598886 SASH1O94885 1247 aa19.94■□□□□ 0.78
SMG9-208ENST00000598886 MMP14P50281 582 aa19.94■□□□□ 0.78
SMG9-208ENST00000598886 TTLL5Q6EMB2 1281 aa19.94■□□□□ 0.78
SMG9-208ENST00000598886 LMBR1LQ6UX01 489 aa19.94■□□□□ 0.78
SMG9-208ENST00000598886 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
SMG9-208ENST00000598886 SSC5DA1L4H1 1573 aa19.94■□□□□ 0.78
SMG9-208ENST00000598886 TNRC18O15417 2968 aaPredicted RBP19.93■□□□□ 0.78
SMG9-208ENST00000598886 GTF2IP78347 998 aa19.93■□□□□ 0.78
SMG9-208ENST00000598886 IFIT5Q13325 482 aaKnown RBP19.93■□□□□ 0.78
SMG9-208ENST00000598886 PRAMEF18Q5VWM3 479 aa19.93■□□□□ 0.78
SMG9-208ENST00000598886 HELBQ8NG08 1087 aaPredicted RBP19.93■□□□□ 0.78
SMG9-208ENST00000598886 CSRNP1Q96S65 589 aa19.93■□□□□ 0.78
SMG9-208ENST00000598886 UTYO14607 1347 aa19.93■□□□□ 0.78
SMG9-208ENST00000598886 COL1A1P02452 1464 aaPredicted RBP19.92■□□□□ 0.78
SMG9-208ENST00000598886 OTOFQ9HC10 1997 aa19.92■□□□□ 0.78
SMG9-208ENST00000598886 ALDH1L1O75891 902 aa19.92■□□□□ 0.78
SMG9-208ENST00000598886 IL1R1P14778 569 aa19.92■□□□□ 0.78
SMG9-208ENST00000598886 KIAA0825Q8IV33 1275 aa19.92■□□□□ 0.78
SMG9-208ENST00000598886 OGFOD1Q8N543 542 aa19.92■□□□□ 0.78
SMG9-208ENST00000598886 ZNF594Q96JF6 807 aaPredicted RBP19.92■□□□□ 0.78
SMG9-208ENST00000598886 MCOLN1Q9GZU1 580 aa19.92■□□□□ 0.78
SMG9-208ENST00000598886 RNF186Q9NXI6 227 aa19.92■□□□□ 0.78
SMG9-208ENST00000598886 FBXW7Q969H0 707 aa19.91■□□□□ 0.78
SMG9-208ENST00000598886 MTMR14Q8NCE2 650 aa19.9■□□□□ 0.78
SMG9-208ENST00000598886 UBE2Q2LH0YL09 131 aa19.89■□□□□ 0.77
SMG9-208ENST00000598886 NBPF7P0C2Y1 421 aaPredicted RBP19.89■□□□□ 0.77
SMG9-208ENST00000598886 KCNJ4P48050 445 aa19.89■□□□□ 0.77
SMG9-208ENST00000598886 AOX1Q06278 1338 aa19.89■□□□□ 0.77
SMG9-208ENST00000598886 SUCLG2Q96I99 432 aa19.89■□□□□ 0.77
SMG9-208ENST00000598886 SRCIN1Q9C0H9 1055 aa19.89■□□□□ 0.77
SMG9-208ENST00000598886 PCDHAC2Q9Y5I4 1007 aa19.89■□□□□ 0.77
SMG9-208ENST00000598886 RGS19P49795 217 aa19.88■□□□□ 0.77
SMG9-208ENST00000598886 FKBP1AP62942 108 aaKnown RBP19.88■□□□□ 0.77
SMG9-208ENST00000598886 RABL6Q3YEC7 729 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms