RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 CADPS2Q86UW7 1296 aa18.13■□□□□ 0.49
TRPM4-209ENST00000598502 SCAND2PQ9GZW5 306 aaPredicted RBP18.13■□□□□ 0.49
TRPM4-209ENST00000598502 ZCCHC17Q9NP64 241 aaKnown RBP18.13■□□□□ 0.49
TRPM4-209ENST00000598502 CAPN2P17655 700 aa18.13■□□□□ 0.49
TRPM4-209ENST00000598502 PDCP20941 246 aa18.13■□□□□ 0.49
TRPM4-209ENST00000598502 ME3Q16798 604 aa18.13■□□□□ 0.49
TRPM4-209ENST00000598502 LRRC2Q9BYS8 371 aa18.13■□□□□ 0.49
TRPM4-209ENST00000598502 DNAI1Q9UI46 699 aa18.13■□□□□ 0.49
TRPM4-209ENST00000598502 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
TRPM4-209ENST00000598502 BLOC1S2Q6QNY1 142 aa18.12■□□□□ 0.49
TRPM4-209ENST00000598502 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
TRPM4-209ENST00000598502 RGPD5Q99666 1765 aa18.12■□□□□ 0.49
TRPM4-209ENST00000598502 HEG1Q9ULI3 1381 aa18.12■□□□□ 0.49
TRPM4-209ENST00000598502 SLC27A2O14975 620 aa18.12■□□□□ 0.49
TRPM4-209ENST00000598502 TPM4P67936 248 aa18.12■□□□□ 0.49
TRPM4-209ENST00000598502 SYCP1Q15431 976 aa18.12■□□□□ 0.49
TRPM4-209ENST00000598502 KINO60870 393 aaKnown RBP18.11■□□□□ 0.49
TRPM4-209ENST00000598502 TIMM10P62072 90 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 CCDC191Q8NCU4 936 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 ZNF594Q96JF6 807 aaPredicted RBP18.11■□□□□ 0.49
TRPM4-209ENST00000598502 ZSCAN31Q96LW9 406 aaPredicted RBP18.11■□□□□ 0.49
TRPM4-209ENST00000598502 TOMM22Q9NS69 142 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 MED1Q15648 1581 aaPredicted RBP18.11■□□□□ 0.49
TRPM4-209ENST00000598502 SEC31AO94979 1220 aaKnown RBP18.11■□□□□ 0.49
TRPM4-209ENST00000598502 LMAN1P49257 510 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 EVA1CP58658 441 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 TMC6Q7Z403 805 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 TPCN1Q9ULQ1 816 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
TRPM4-209ENST00000598502 PTPN12Q05209 780 aaKnown RBP18.11■□□□□ 0.49
TRPM4-209ENST00000598502 TNNI3KQ59H18 835 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 FPGT-TNNI3KV9GXZ4 949 aa18.11■□□□□ 0.49
TRPM4-209ENST00000598502 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 AOPEPQ8N6M6 819 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 BIN1O00499 593 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 GYS2P54840 703 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 ISM2Q6H9L7 571 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 HIP1O00291 1037 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 CLCN6P51797 869 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 RAD51AP2Q09MP3 1159 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 ZSWIM4Q9H7M6 989 aa18.1■□□□□ 0.49
TRPM4-209ENST00000598502 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
TRPM4-209ENST00000598502 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
TRPM4-209ENST00000598502 GUCY1B3Q02153 619 aa18.09■□□□□ 0.49
TRPM4-209ENST00000598502 VPS53Q5VIR6 699 aa18.09■□□□□ 0.49
TRPM4-209ENST00000598502 LEO1Q8WVC0 666 aaPredicted RBP18.09■□□□□ 0.49
TRPM4-209ENST00000598502 EPC1Q9H2F5 836 aa18.09■□□□□ 0.49
TRPM4-209ENST00000598502 ZSWIM6Q9HCJ5 1215 aa18.09■□□□□ 0.49
TRPM4-209ENST00000598502 C11orf57Q6ZUT1 292 aaPredicted RBP18.09■□□□□ 0.49
TRPM4-209ENST00000598502 CHMP4CQ96CF2 233 aa18.09■□□□□ 0.49
TRPM4-209ENST00000598502 GOLIM4O00461 696 aa18.08■□□□□ 0.49
TRPM4-209ENST00000598502 SFPQP23246 707 aaKnown RBP eCLIP18.08■□□□□ 0.49
TRPM4-209ENST00000598502 ME1P48163 572 aa18.08■□□□□ 0.49
TRPM4-209ENST00000598502 SF3A1Q15459 793 aaKnown RBP18.08■□□□□ 0.49
TRPM4-209ENST00000598502 MAP4K1Q92918 833 aa18.08■□□□□ 0.49
TRPM4-209ENST00000598502 CLSTN2Q9H4D0 955 aa18.08■□□□□ 0.49
TRPM4-209ENST00000598502 NBPF26B4DH59 902 aa18.08■□□□□ 0.48
TRPM4-209ENST00000598502 PSMA5P28066 241 aa18.08■□□□□ 0.48
TRPM4-209ENST00000598502 NBPF14Q5TI25 921 aa18.08■□□□□ 0.48
TRPM4-209ENST00000598502 NBPF10Q6P3W6 841 aaKnown RBP18.08■□□□□ 0.48
TRPM4-209ENST00000598502 NBPF15Q8N660 670 aa18.08■□□□□ 0.48
TRPM4-209ENST00000598502 PLA2G4DQ86XP0 818 aa18.08■□□□□ 0.48
TRPM4-209ENST00000598502 LRRN4CLQ8ND94 238 aa18.08■□□□□ 0.48
TRPM4-209ENST00000598502 LMO7Q8WWI1 1683 aa18.07■□□□□ 0.48
TRPM4-209ENST00000598502 SLIT3O75094 1523 aa18.07■□□□□ 0.48
TRPM4-209ENST00000598502 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
TRPM4-209ENST00000598502 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.07■□□□□ 0.48
TRPM4-209ENST00000598502 RASSF4Q9H2L5 321 aa18.07■□□□□ 0.48
TRPM4-209ENST00000598502 TSPYL1Q9H0U9 437 aa18.07■□□□□ 0.48
TRPM4-209ENST00000598502 SNRKQ9NRH2 765 aa18.07■□□□□ 0.48
TRPM4-209ENST00000598502 TDRD7Q8NHU6 1098 aaKnown RBP18.07■□□□□ 0.48
TRPM4-209ENST00000598502 UTYO14607 1347 aa18.06■□□□□ 0.48
TRPM4-209ENST00000598502 NEMFO60524 1076 aa18.06■□□□□ 0.48
TRPM4-209ENST00000598502 PNMA6AP0CW24 399 aaPredicted RBP18.06■□□□□ 0.48
TRPM4-209ENST00000598502 CCAR1Q8IX12 1150 aaKnown RBP18.06■□□□□ 0.48
TRPM4-209ENST00000598502 CEP57L1Q8IYX8 460 aa18.06■□□□□ 0.48
TRPM4-209ENST00000598502 PLBD2Q8NHP8 589 aa18.06■□□□□ 0.48
TRPM4-209ENST00000598502 TRIM66O15016 1216 aa18.06■□□□□ 0.48
TRPM4-209ENST00000598502 EPB41L2O43491 1005 aaKnown RBP18.06■□□□□ 0.48
TRPM4-209ENST00000598502 FEZ2Q9UHY8 353 aaPredicted RBP18.06■□□□□ 0.48
TRPM4-209ENST00000598502 COPRSQ9NQ92 184 aa18.05■□□□□ 0.48
TRPM4-209ENST00000598502 ZNF446Q9NWS9 450 aa18.05■□□□□ 0.48
TRPM4-209ENST00000598502 ST5P78524 1137 aa18.05■□□□□ 0.48
TRPM4-209ENST00000598502 MST1RQ04912 1400 aa18.05■□□□□ 0.48
TRPM4-209ENST00000598502 LRRC24Q50LG9 513 aa18.05■□□□□ 0.48
TRPM4-209ENST00000598502 SPATA31A3Q5VYP0 1347 aa18.05■□□□□ 0.48
TRPM4-209ENST00000598502 CARD6Q9BX69 1037 aa18.05■□□□□ 0.48
TRPM4-209ENST00000598502 CWC25Q9NXE8 425 aaPredicted RBP18.05■□□□□ 0.48
TRPM4-209ENST00000598502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRPM4-209ENST00000598502 JAK2O60674 1132 aa18.04■□□□□ 0.48
TRPM4-209ENST00000598502 FKBP4Q02790 459 aaKnown RBP eCLIP18.04■□□□□ 0.48
TRPM4-209ENST00000598502 ST3GAL1Q11201 340 aa18.04■□□□□ 0.48
TRPM4-209ENST00000598502 STX1AQ16623 288 aa18.04■□□□□ 0.48
TRPM4-209ENST00000598502 CWC15Q9P013 229 aaKnown RBP18.04■□□□□ 0.48
TRPM4-209ENST00000598502 CYP2C19P33261 490 aa18.04■□□□□ 0.48
TRPM4-209ENST00000598502 PTPN21Q16825 1174 aa18.04■□□□□ 0.48
TRPM4-209ENST00000598502 TAF5LO75529 589 aa18.04■□□□□ 0.48
TRPM4-209ENST00000598502 OAS2P29728 719 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms