RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 IP6K1Q92551 441 aa10.82□□□□□ -0.68
LINC00343-206ENST00000598478 OCSTAMPQ9BR26 566 aa10.82□□□□□ -0.68
LINC00343-206ENST00000598478 PRDM10Q9NQV6 1147 aa10.82□□□□□ -0.68
LINC00343-206ENST00000598478 ITGB4P16144 1822 aa10.81□□□□□ -0.68
LINC00343-206ENST00000598478 AP1G2O75843 785 aa10.81□□□□□ -0.68
LINC00343-206ENST00000598478 PTK2Q05397 1052 aa10.81□□□□□ -0.68
LINC00343-206ENST00000598478 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
LINC00343-206ENST00000598478 ABHD8Q96I13 439 aa10.81□□□□□ -0.68
LINC00343-206ENST00000598478 MLLT1Q03111 559 aaPredicted RBP10.8□□□□□ -0.68
LINC00343-206ENST00000598478 USHBP1Q8N6Y0 703 aa10.8□□□□□ -0.68
LINC00343-206ENST00000598478 DCAF5Q96JK2 942 aa10.8□□□□□ -0.68
LINC00343-206ENST00000598478 GPSM3Q9Y4H4 160 aa10.8□□□□□ -0.68
LINC00343-206ENST00000598478 NSD3Q9BZ95 1437 aa10.8□□□□□ -0.68
LINC00343-206ENST00000598478 MAP2P11137 1827 aaKnown RBP10.79□□□□□ -0.68
LINC00343-206ENST00000598478 SBNO2Q9Y2G9 1366 aa10.79□□□□□ -0.68
LINC00343-206ENST00000598478 VEGFAP15692 232 aaPredicted RBP10.79□□□□□ -0.68
LINC00343-206ENST00000598478 FBLN1P23142 703 aa10.79□□□□□ -0.68
LINC00343-206ENST00000598478 LBX1P52954 281 aa10.79□□□□□ -0.68
LINC00343-206ENST00000598478 ADAM32Q8TC27 787 aa10.79□□□□□ -0.68
LINC00343-206ENST00000598478 C4AP0C0L4 1744 aa10.78□□□□□ -0.68
LINC00343-206ENST00000598478 HMGB2P26583 209 aaKnown RBP10.78□□□□□ -0.68
LINC00343-206ENST00000598478 CTCFP49711 727 aaPredicted RBP10.78□□□□□ -0.68
LINC00343-206ENST00000598478 RASSF7Q02833 373 aa10.78□□□□□ -0.68
LINC00343-206ENST00000598478 ITPK1Q13572 414 aa10.78□□□□□ -0.68
LINC00343-206ENST00000598478 GPR161Q8N6U8 529 aaKnown RBP10.78□□□□□ -0.68
LINC00343-206ENST00000598478 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
LINC00343-206ENST00000598478 CCDC87Q9NVE4 849 aa10.78□□□□□ -0.68
LINC00343-206ENST00000598478 PIM2Q9P1W9 311 aa10.78□□□□□ -0.68
LINC00343-206ENST00000598478 RAB3GAP2Q9H2M9 1393 aa10.77□□□□□ -0.68
LINC00343-206ENST00000598478 CD163L1Q9NR16 1453 aa10.77□□□□□ -0.69
LINC00343-206ENST00000598478 HOXC9P31274 260 aa10.77□□□□□ -0.69
LINC00343-206ENST00000598478 TMF1P82094 1093 aa10.77□□□□□ -0.69
LINC00343-206ENST00000598478 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
LINC00343-206ENST00000598478 NBPF6Q5VWK0 638 aa10.77□□□□□ -0.69
LINC00343-206ENST00000598478 EPS8L1Q8TE68 723 aa10.77□□□□□ -0.69
LINC00343-206ENST00000598478 PIGBQ92521 554 aa10.77□□□□□ -0.69
LINC00343-206ENST00000598478 SMARCC1Q92922 1105 aaPredicted RBP10.77□□□□□ -0.69
LINC00343-206ENST00000598478 NBPF4Q96M43 638 aa10.77□□□□□ -0.69
LINC00343-206ENST00000598478 LOC102724428A0A0B4J2F2 783 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 GLTPD2A6NH11 291 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 CCDC85CA6NKD9 419 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 SIK1P57059 783 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 RELBQ01201 579 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 KRT76Q01546 638 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 CCDC155Q8N6L0 562 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 AIDAQ96BJ3 306 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 MAP3K19Q56UN5 1328 aa10.76□□□□□ -0.69
LINC00343-206ENST00000598478 CYP27B1O15528 508 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 CHRNA5P30532 468 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 CTSOP43234 321 aaPredicted RBP10.75□□□□□ -0.69
LINC00343-206ENST00000598478 NBPF20Q3BBV1 942 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 NLGN1Q8N2Q7 840 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 PNMA1Q8ND90 353 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 HMX1Q9NP08 348 aaPredicted RBP10.75□□□□□ -0.69
LINC00343-206ENST00000598478 CNTNAP1P78357 1384 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
LINC00343-206ENST00000598478 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 USP17L8P0C7I0 530 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 GYS1P13807 737 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 AMPHP49418 695 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 RGS19P49795 217 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 TRAPPC3LQ5T215 181 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 NANOS1Q8WY41 292 aaKnown RBP10.74□□□□□ -0.69
LINC00343-206ENST00000598478 RAPGEF4Q8WZA2 1011 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 INSM2Q96T92 566 aaPredicted RBP10.74□□□□□ -0.69
LINC00343-206ENST00000598478 ASAP1Q9ULH1 1129 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 PARP3Q9Y6F1 533 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 PCDH11XQ9BZA7 1347 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 PCDH11YQ9BZA8 1340 aa10.74□□□□□ -0.69
LINC00343-206ENST00000598478 VIRMAQ69YN4 1812 aaKnown RBP10.73□□□□□ -0.69
LINC00343-206ENST00000598478 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
LINC00343-206ENST00000598478 TMC1Q8TDI8 760 aa10.73□□□□□ -0.69
LINC00343-206ENST00000598478 TMPRSS4Q9NRS4 437 aa10.73□□□□□ -0.69
LINC00343-206ENST00000598478 CGNL1Q0VF96 1302 aa10.73□□□□□ -0.69
LINC00343-206ENST00000598478 KDM6AO15550 1401 aaPredicted RBP10.73□□□□□ -0.69
LINC00343-206ENST00000598478 PDE4DIPQ5VU43 2346 aa10.73□□□□□ -0.69
LINC00343-206ENST00000598478 SLC35F4A4IF30 521 aa10.72□□□□□ -0.69
LINC00343-206ENST00000598478 HSPA8P11142 646 aaKnown RBP10.72□□□□□ -0.69
LINC00343-206ENST00000598478 RAB15P59190 212 aa10.72□□□□□ -0.69
LINC00343-206ENST00000598478 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
LINC00343-206ENST00000598478 SLC12A5Q9H2X9 1139 aa10.72□□□□□ -0.69
LINC00343-206ENST00000598478 POLMQ9NP87 494 aaPredicted RBP10.72□□□□□ -0.69
LINC00343-206ENST00000598478 LMNB1P20700 586 aa10.71□□□□□ -0.69
LINC00343-206ENST00000598478 EDC4Q6P2E9 1401 aaKnown RBP10.71□□□□□ -0.69
LINC00343-206ENST00000598478 DZIP3Q86Y13 1208 aaKnown RBP10.71□□□□□ -0.69
LINC00343-206ENST00000598478 ZNF395Q9H8N7 513 aaPredicted RBP10.71□□□□□ -0.69
LINC00343-206ENST00000598478 RTCBQ9Y3I0 505 aaKnown RBP10.71□□□□□ -0.69
LINC00343-206ENST00000598478 HDGFL2Q7Z4V5 671 aaPredicted RBP10.7□□□□□ -0.7
LINC00343-206ENST00000598478 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
LINC00343-206ENST00000598478 ADH1AP07327 375 aa10.69□□□□□ -0.7
LINC00343-206ENST00000598478 ITGA6P23229 1130 aa10.69□□□□□ -0.7
LINC00343-206ENST00000598478 RFC4P35249 363 aa10.69□□□□□ -0.7
LINC00343-206ENST00000598478 RFC5P40937 340 aa10.69□□□□□ -0.7
LINC00343-206ENST00000598478 DDR1Q08345 913 aa10.69□□□□□ -0.7
LINC00343-206ENST00000598478 RRS1Q15050 365 aaKnown RBP10.69□□□□□ -0.7
LINC00343-206ENST00000598478 RNF217Q8TC41 542 aa10.69□□□□□ -0.7
LINC00343-206ENST00000598478 ERVH48-1M5A8F1 160 aa10.68□□□□□ -0.7
LINC00343-206ENST00000598478 LILRA1O75019 489 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms