RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 PTPN12Q05209 780 aaKnown RBP28.54■■■□□ 2.16
IRF3-220ENST00000598108 USP50Q70EL3 339 aaPredicted RBP28.54■■■□□ 2.16
IRF3-220ENST00000598108 MICALL2Q8IY33 904 aa28.54■■■□□ 2.16
IRF3-220ENST00000598108 HDAC5Q9UQL6 1122 aa28.54■■■□□ 2.16
IRF3-220ENST00000598108 USP17L3A6NCW0 530 aa28.53■■■□□ 2.16
IRF3-220ENST00000598108 USP17L4A6NCW7 530 aa28.53■■■□□ 2.16
IRF3-220ENST00000598108 USP17L1Q7RTZ2 530 aa28.53■■■□□ 2.16
IRF3-220ENST00000598108 DZIP1LQ8IYY4 767 aaKnown RBP28.53■■■□□ 2.16
IRF3-220ENST00000598108 MROH5Q6ZUA9 1318 aa28.52■■■□□ 2.16
IRF3-220ENST00000598108 RPS12P25398 132 aaKnown RBP28.52■■■□□ 2.16
IRF3-220ENST00000598108 HIRAP54198 1017 aaPredicted RBP28.52■■■□□ 2.16
IRF3-220ENST00000598108 MAP1SQ66K74 1059 aaPredicted RBP28.52■■■□□ 2.16
IRF3-220ENST00000598108 RSBN1LQ6PCB5 846 aaPredicted RBP28.52■■■□□ 2.16
IRF3-220ENST00000598108 CD209Q9NNX6 404 aa28.52■■■□□ 2.16
IRF3-220ENST00000598108 CEP350Q5VT06 3117 aa28.52■■■□□ 2.16
IRF3-220ENST00000598108 METTL24Q5JXM2 366 aa28.51■■■□□ 2.15
IRF3-220ENST00000598108 TRPM4Q8TD43 1214 aa28.51■■■□□ 2.15
IRF3-220ENST00000598108 MXD3Q9BW11 206 aa28.51■■■□□ 2.15
IRF3-220ENST00000598108 SCN9AQ15858 1988 aa28.51■■■□□ 2.15
IRF3-220ENST00000598108 H7C1D1 291 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 ITGBL1O95965 494 aaPredicted RBP28.5■■■□□ 2.15
IRF3-220ENST00000598108 APLP1P51693 650 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 HTRA3P83110 453 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 UBE4AQ14139 1066 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 SAMD7Q7Z3H4 446 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 FTSJ3Q8IY81 847 aaKnown RBP28.5■■■□□ 2.15
IRF3-220ENST00000598108 VGLL2Q8N8G2 317 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 GMLQ99445 158 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 RCAN3Q9UKA8 241 aa28.5■■■□□ 2.15
IRF3-220ENST00000598108 EYA2O00167 538 aa28.49■■■□□ 2.15
IRF3-220ENST00000598108 EGFRP00533 1210 aa28.49■■■□□ 2.15
IRF3-220ENST00000598108 DACT2Q5SW24 774 aa28.49■■■□□ 2.15
IRF3-220ENST00000598108 CNTROBQ8N137 903 aa28.49■■■□□ 2.15
IRF3-220ENST00000598108 ATG9AQ7Z3C6 839 aa28.48■■■□□ 2.15
IRF3-220ENST00000598108 PANK1Q8TE04 598 aa28.48■■■□□ 2.15
IRF3-220ENST00000598108 PA2G4Q9UQ80 394 aaKnown RBP28.48■■■□□ 2.15
IRF3-220ENST00000598108 PDE8BO95263 885 aa28.47■■■□□ 2.15
IRF3-220ENST00000598108 GNAI2P04899 355 aa28.47■■■□□ 2.15
IRF3-220ENST00000598108 STRIP1Q5VSL9 837 aa28.47■■■□□ 2.15
IRF3-220ENST00000598108 AGBL3Q8NEM8 1001 aa28.47■■■□□ 2.15
IRF3-220ENST00000598108 FBXW7Q969H0 707 aa28.47■■■□□ 2.15
IRF3-220ENST00000598108 SIL1Q9H173 461 aa28.47■■■□□ 2.15
IRF3-220ENST00000598108 TBC1D10BQ4KMP7 808 aaPredicted RBP28.46■■■□□ 2.15
IRF3-220ENST00000598108 TTLL5Q6EMB2 1281 aa28.46■■■□□ 2.15
IRF3-220ENST00000598108 ITPRIPQ8IWB1 547 aa28.46■■■□□ 2.15
IRF3-220ENST00000598108 ADAMTSL1Q8N6G6 1762 aa28.46■■■□□ 2.15
IRF3-220ENST00000598108 PASKQ96RG2 1323 aa28.45■■■□□ 2.15
IRF3-220ENST00000598108 ZBTB7BO15156 539 aaPredicted RBP28.45■■■□□ 2.14
IRF3-220ENST00000598108 IL1R1P14778 569 aa28.45■■■□□ 2.14
IRF3-220ENST00000598108 GYG1P46976 350 aa28.45■■■□□ 2.14
IRF3-220ENST00000598108 GTF2IP78347 998 aa28.45■■■□□ 2.14
IRF3-220ENST00000598108 MTX1Q13505 466 aa28.45■■■□□ 2.14
IRF3-220ENST00000598108 RBM26Q5T8P6 1007 aaKnown RBP28.45■■■□□ 2.14
IRF3-220ENST00000598108 FAM84BQ96KN1 310 aaPredicted RBP28.45■■■□□ 2.14
IRF3-220ENST00000598108 PGAP2Q9UHJ9 254 aa28.45■■■□□ 2.14
IRF3-220ENST00000598108 SRGAP3O43295 1099 aa28.44■■■□□ 2.14
IRF3-220ENST00000598108 ZNF280AP59817 542 aaPredicted RBP28.44■■■□□ 2.14
IRF3-220ENST00000598108 ZNF804AQ7Z570 1209 aa28.44■■■□□ 2.14
IRF3-220ENST00000598108 COPRSQ9NQ92 184 aa28.44■■■□□ 2.14
IRF3-220ENST00000598108 CIAO1O76071 339 aa28.43■■■□□ 2.14
IRF3-220ENST00000598108 ZNF609O15014 1411 aa28.43■■■□□ 2.14
IRF3-220ENST00000598108 USP17L8P0C7I0 530 aa28.42■■■□□ 2.14
IRF3-220ENST00000598108 FGFR2P21802 821 aa28.42■■■□□ 2.14
IRF3-220ENST00000598108 HIBADHP31937 336 aaKnown RBP28.42■■■□□ 2.14
IRF3-220ENST00000598108 FMR1Q06787 632 aaKnown RBP eCLIP28.42■■■□□ 2.14
IRF3-220ENST00000598108 YTHDC1Q96MU7 727 aaKnown RBP28.42■■■□□ 2.14
IRF3-220ENST00000598108 FBXO3Q9UK99 471 aa28.42■■■□□ 2.14
IRF3-220ENST00000598108 PNMA6EA0A0J9YXQ4 647 aa28.41■■■□□ 2.14
IRF3-220ENST00000598108 FBXO33Q7Z6M2 555 aa28.41■■■□□ 2.14
IRF3-220ENST00000598108 DNAJC5GQ8N7S2 189 aa28.41■■■□□ 2.14
IRF3-220ENST00000598108 ZC3H15Q8WU90 426 aaKnown RBP28.41■■■□□ 2.14
IRF3-220ENST00000598108 A0A1B0GUL6 1792 aa28.4■■■□□ 2.14
IRF3-220ENST00000598108 PUM3Q15397 648 aaKnown RBP28.4■■■□□ 2.14
IRF3-220ENST00000598108 TDRD7Q8NHU6 1098 aaKnown RBP28.4■■■□□ 2.14
IRF3-220ENST00000598108 C1orf115Q9H7X2 142 aa28.4■■■□□ 2.14
IRF3-220ENST00000598108 JAG2Q9Y219 1238 aa28.4■■■□□ 2.14
IRF3-220ENST00000598108 TRAF5O00463 557 aa28.39■■■□□ 2.14
IRF3-220ENST00000598108 KIF4BQ2VIQ3 1234 aa28.39■■■□□ 2.14
IRF3-220ENST00000598108 CERS5Q8N5B7 392 aa28.39■■■□□ 2.14
IRF3-220ENST00000598108 SASH1O94885 1247 aa28.38■■■□□ 2.13
IRF3-220ENST00000598108 IL15P40933 162 aaPredicted RBP28.38■■■□□ 2.13
IRF3-220ENST00000598108 CEP126Q9P2H0 1117 aa28.38■■■□□ 2.13
IRF3-220ENST00000598108 BCAMP50895 628 aa28.37■■■□□ 2.13
IRF3-220ENST00000598108 GLIS2Q9BZE0 524 aaPredicted RBP28.37■■■□□ 2.13
IRF3-220ENST00000598108 MYOZ2Q9NPC6 264 aa28.37■■■□□ 2.13
IRF3-220ENST00000598108 ASTN2O75129 1339 aaPredicted RBP28.37■■■□□ 2.13
IRF3-220ENST00000598108 MYO3BQ8WXR4 1341 aa28.37■■■□□ 2.13
IRF3-220ENST00000598108 IFIT1P09914 478 aaKnown RBP28.36■■■□□ 2.13
IRF3-220ENST00000598108 KIAA0825Q8IV33 1275 aa28.36■■■□□ 2.13
IRF3-220ENST00000598108 MS4A1P11836 297 aa28.35■■■□□ 2.13
IRF3-220ENST00000598108 ATP8B2P98198 1209 aa28.35■■■□□ 2.13
IRF3-220ENST00000598108 LPIN2Q92539 896 aa28.35■■■□□ 2.13
IRF3-220ENST00000598108 IQSEC3Q9UPP2 1182 aaPredicted RBP28.35■■■□□ 2.13
IRF3-220ENST00000598108 SCARF1Q14162 830 aa28.34■■■□□ 2.13
IRF3-220ENST00000598108 CAVIN4Q5BKX8 364 aa28.34■■■□□ 2.13
IRF3-220ENST00000598108 DLK2Q6UY11 383 aa28.34■■■□□ 2.13
IRF3-220ENST00000598108 VPS37DQ86XT2 251 aa28.34■■■□□ 2.13
IRF3-220ENST00000598108 CREBZFQ9NS37 354 aa28.34■■■□□ 2.13
IRF3-220ENST00000598108 COG6Q9Y2V7 657 aa28.34■■■□□ 2.13
IRF3-220ENST00000598108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms