RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CCT4P50991 539 aaKnown RBP21.77■■□□□ 1.08
PNKP-210ENST00000597965 TWISTNBQ3B726 338 aaPredicted RBP21.77■■□□□ 1.08
PNKP-210ENST00000597965 NCBP3Q53F19 620 aaKnown RBP21.77■■□□□ 1.08
PNKP-210ENST00000597965 COA1Q9GZY4 146 aa21.77■■□□□ 1.08
PNKP-210ENST00000597965 GREM2Q9H772 168 aa21.77■■□□□ 1.08
PNKP-210ENST00000597965 LEMD3Q9Y2U8 911 aa21.77■■□□□ 1.08
PNKP-210ENST00000597965 NEURL1BA8MQ27 555 aa21.76■■□□□ 1.07
PNKP-210ENST00000597965 STRIP1Q5VSL9 837 aa21.76■■□□□ 1.07
PNKP-210ENST00000597965 ANKRD2Q9GZV1 360 aa21.76■■□□□ 1.07
PNKP-210ENST00000597965 MYH16Q9H6N6 1097 aa21.76■■□□□ 1.07
PNKP-210ENST00000597965 PAPPA2Q9BXP8 1791 aa21.76■■□□□ 1.07
PNKP-210ENST00000597965 IL16Q14005 1332 aa21.76■■□□□ 1.07
PNKP-210ENST00000597965 TRPA1O75762 1119 aa21.75■■□□□ 1.07
PNKP-210ENST00000597965 SLC4A2P04920 1241 aa21.75■■□□□ 1.07
PNKP-210ENST00000597965 NF2P35240 595 aa21.75■■□□□ 1.07
PNKP-210ENST00000597965 UBE3BQ7Z3V4 1068 aa21.75■■□□□ 1.07
PNKP-210ENST00000597965 TSR2Q969E8 191 aaKnown RBP21.75■■□□□ 1.07
PNKP-210ENST00000597965 RNF186Q9NXI6 227 aa21.75■■□□□ 1.07
PNKP-210ENST00000597965 ASTN2O75129 1339 aaPredicted RBP21.75■■□□□ 1.07
PNKP-210ENST00000597965 H7C1W4 665 aa21.74■■□□□ 1.07
PNKP-210ENST00000597965 CWF19L2Q2TBE0 894 aaKnown RBP21.74■■□□□ 1.07
PNKP-210ENST00000597965 WWC1Q8IX03 1113 aa21.74■■□□□ 1.07
PNKP-210ENST00000597965 CSRNP1Q96S65 589 aa21.74■■□□□ 1.07
PNKP-210ENST00000597965 MPHOSPH8Q99549 860 aa21.74■■□□□ 1.07
PNKP-210ENST00000597965 PLA2G12BQ9BX93 195 aa21.74■■□□□ 1.07
PNKP-210ENST00000597965 HDAC9Q9UKV0 1011 aa21.73■■□□□ 1.07
PNKP-210ENST00000597965 CACNA1FO60840 1977 aa21.73■■□□□ 1.07
PNKP-210ENST00000597965 DACT2Q5SW24 774 aa21.72■■□□□ 1.07
PNKP-210ENST00000597965 RASAL3Q86YV0 1011 aa21.72■■□□□ 1.07
PNKP-210ENST00000597965 FBXW7Q969H0 707 aa21.72■■□□□ 1.07
PNKP-210ENST00000597965 ITGA6P23229 1130 aa21.71■■□□□ 1.07
PNKP-210ENST00000597965 KCNJ4P48050 445 aa21.71■■□□□ 1.07
PNKP-210ENST00000597965 FLIIQ13045 1269 aa21.71■■□□□ 1.07
PNKP-210ENST00000597965 GCKRQ14397 625 aa21.71■■□□□ 1.07
PNKP-210ENST00000597965 ZNF804BA4D1E1 1349 aa21.71■■□□□ 1.07
PNKP-210ENST00000597965 SPEF2Q9C093 1822 aa21.71■■□□□ 1.07
PNKP-210ENST00000597965 FKBP5Q13451 457 aaPredicted RBP21.7■■□□□ 1.06
PNKP-210ENST00000597965 TTLL12Q14166 644 aaPredicted RBP21.7■■□□□ 1.06
PNKP-210ENST00000597965 TTLL5Q6EMB2 1281 aa21.7■■□□□ 1.06
PNKP-210ENST00000597965 APOBEC3FQ8IUX4 373 aaKnown RBP21.7■■□□□ 1.06
PNKP-210ENST00000597965 LINS1Q8NG48 757 aa21.7■■□□□ 1.06
PNKP-210ENST00000597965 WNT10BO00744 389 aa21.69■■□□□ 1.06
PNKP-210ENST00000597965 NBPF9Q3BBW0 867 aa21.69■■□□□ 1.06
PNKP-210ENST00000597965 DNAAF4Q8WXU2 420 aa21.69■■□□□ 1.06
PNKP-210ENST00000597965 CSF1RP07333 972 aa21.68■■□□□ 1.06
PNKP-210ENST00000597965 ANKRD18BA2A2Z9 1011 aa21.67■■□□□ 1.06
PNKP-210ENST00000597965 PKN2Q16513 984 aaKnown RBP21.67■■□□□ 1.06
PNKP-210ENST00000597965 G2E3Q7L622 706 aa21.67■■□□□ 1.06
PNKP-210ENST00000597965 ARMC9Q7Z3E5 817 aa21.67■■□□□ 1.06
PNKP-210ENST00000597965 CTU1Q7Z7A3 348 aaKnown RBP21.67■■□□□ 1.06
PNKP-210ENST00000597965 WTIPA6NIX2 430 aaPredicted RBP21.65■■□□□ 1.06
PNKP-210ENST00000597965 SREBF2Q12772 1141 aa21.65■■□□□ 1.06
PNKP-210ENST00000597965 WDR63Q8IWG1 891 aa21.65■■□□□ 1.06
PNKP-210ENST00000597965 UBE2Q2LH0YL09 131 aa21.64■■□□□ 1.05
PNKP-210ENST00000597965 CASP7P55210 303 aa21.64■■□□□ 1.05
PNKP-210ENST00000597965 CHRNDQ07001 517 aa21.64■■□□□ 1.05
PNKP-210ENST00000597965 IFIT5Q13325 482 aaKnown RBP21.64■■□□□ 1.05
PNKP-210ENST00000597965 TXNRD3Q86VQ6 643 aa21.64■■□□□ 1.05
PNKP-210ENST00000597965 KIAA0825Q8IV33 1275 aa21.64■■□□□ 1.05
PNKP-210ENST00000597965 COL1A1P02452 1464 aaPredicted RBP21.64■■□□□ 1.05
PNKP-210ENST00000597965 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
PNKP-210ENST00000597965 TM4SF4P48230 202 aa21.63■■□□□ 1.05
PNKP-210ENST00000597965 GTF2IP78347 998 aa21.63■■□□□ 1.05
PNKP-210ENST00000597965 NOM1Q5C9Z4 860 aaKnown RBP21.63■■□□□ 1.05
PNKP-210ENST00000597965 MXD3Q9BW11 206 aa21.63■■□□□ 1.05
PNKP-210ENST00000597965 MYO1BO43795 1136 aa21.62■■□□□ 1.05
PNKP-210ENST00000597965 SASH1O94885 1247 aa21.62■■□□□ 1.05
PNKP-210ENST00000597965 C15orf52Q6ZUT6 534 aaKnown RBP21.62■■□□□ 1.05
PNKP-210ENST00000597965 CD209Q9NNX6 404 aa21.62■■□□□ 1.05
PNKP-210ENST00000597965 ZNF646O15015 1829 aaPredicted RBP21.62■■□□□ 1.05
PNKP-210ENST00000597965 DLGAP5Q15398 846 aa21.61■■□□□ 1.05
PNKP-210ENST00000597965 PRAMEF18Q5VWM3 479 aa21.61■■□□□ 1.05
PNKP-210ENST00000597965 MOB2Q70IA6 237 aa21.61■■□□□ 1.05
PNKP-210ENST00000597965 ZNF804AQ7Z570 1209 aa21.61■■□□□ 1.05
PNKP-210ENST00000597965 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
PNKP-210ENST00000597965 SCAF8Q9UPN6 1271 aaKnown RBP21.61■■□□□ 1.05
PNKP-210ENST00000597965 PPP2R3BQ9Y5P8 575 aa21.61■■□□□ 1.05
PNKP-210ENST00000597965 VAMP4O75379 141 aa21.6■■□□□ 1.05
PNKP-210ENST00000597965 MTMR14Q8NCE2 650 aa21.6■■□□□ 1.05
PNKP-210ENST00000597965 CHMP3Q9Y3E7 222 aa21.6■■□□□ 1.05
PNKP-210ENST00000597965 UNCXA6NJT0 531 aa21.59■■□□□ 1.05
PNKP-210ENST00000597965 SLC34A2O95436 690 aa21.59■■□□□ 1.05
PNKP-210ENST00000597965 ALDH1A1P00352 501 aa21.59■■□□□ 1.05
PNKP-210ENST00000597965 INHBEP58166 350 aa21.59■■□□□ 1.05
PNKP-210ENST00000597965 FKBP1AP62942 108 aaKnown RBP21.59■■□□□ 1.05
PNKP-210ENST00000597965 CCDC57Q2TAC2 916 aa21.59■■□□□ 1.05
PNKP-210ENST00000597965 CCDC184Q52MB2 194 aa21.59■■□□□ 1.05
PNKP-210ENST00000597965 PPP1R12BO60237 982 aaPredicted RBP21.58■■□□□ 1.05
PNKP-210ENST00000597965 KLRK1P26718 216 aa21.58■■□□□ 1.05
PNKP-210ENST00000597965 TAF7LQ5H9L4 462 aa21.58■■□□□ 1.05
PNKP-210ENST00000597965 ZBED3Q96IU2 234 aaPredicted RBP21.58■■□□□ 1.05
PNKP-210ENST00000597965 DEFB129Q9H1M3 183 aa21.58■■□□□ 1.05
PNKP-210ENST00000597965 ANP32CO43423 234 aa21.57■■□□□ 1.04
PNKP-210ENST00000597965 TBC1D8O95759 1140 aa21.57■■□□□ 1.04
PNKP-210ENST00000597965 IL1R1P14778 569 aa21.57■■□□□ 1.04
PNKP-210ENST00000597965 SUPT20HL1Q3ZLR7 823 aa21.57■■□□□ 1.04
PNKP-210ENST00000597965 ZNF296Q8WUU4 475 aaPredicted RBP21.57■■□□□ 1.04
PNKP-210ENST00000597965 CFHR5Q9BXR6 569 aa21.57■■□□□ 1.04
PNKP-210ENST00000597965 ANGEL1Q9UNK9 670 aaKnown RBP21.57■■□□□ 1.04
PNKP-210ENST00000597965 FOXO4P98177 505 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms