RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 NEFLP07196 543 aa17.74■□□□□ 0.43
VRK3-213ENST00000597215 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
VRK3-213ENST00000597215 SLC5A1P13866 664 aa17.74■□□□□ 0.43
VRK3-213ENST00000597215 KLRK1P26718 216 aa17.74■□□□□ 0.43
VRK3-213ENST00000597215 ATP2B3Q16720 1220 aa17.74■□□□□ 0.43
VRK3-213ENST00000597215 IRS2Q9Y4H2 1338 aa17.73■□□□□ 0.43
VRK3-213ENST00000597215 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
VRK3-213ENST00000597215 DOK7Q18PE1 504 aa17.73■□□□□ 0.43
VRK3-213ENST00000597215 ZNF804AQ7Z570 1209 aa17.73■□□□□ 0.43
VRK3-213ENST00000597215 TXNRD3Q86VQ6 643 aa17.73■□□□□ 0.43
VRK3-213ENST00000597215 COA1Q9GZY4 146 aa17.73■□□□□ 0.43
VRK3-213ENST00000597215 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
VRK3-213ENST00000597215 ZNF609O15014 1411 aa17.72■□□□□ 0.43
VRK3-213ENST00000597215 ARAP2Q8WZ64 1704 aa17.72■□□□□ 0.43
VRK3-213ENST00000597215 FZD9O00144 591 aa17.72■□□□□ 0.43
VRK3-213ENST00000597215 ECE2O60344 883 aa17.72■□□□□ 0.43
VRK3-213ENST00000597215 EIF6P56537 245 aaKnown RBP17.72■□□□□ 0.43
VRK3-213ENST00000597215 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
VRK3-213ENST00000597215 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
VRK3-213ENST00000597215 GPR108Q9NPR9 543 aa17.72■□□□□ 0.43
VRK3-213ENST00000597215 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
VRK3-213ENST00000597215 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
VRK3-213ENST00000597215 CAVIN4Q5BKX8 364 aa17.71■□□□□ 0.43
VRK3-213ENST00000597215 DCTPP1Q9H773 170 aa17.71■□□□□ 0.43
VRK3-213ENST00000597215 APBB1O00213 710 aa17.7■□□□□ 0.42
VRK3-213ENST00000597215 PODNQ7Z5L7 613 aa17.7■□□□□ 0.42
VRK3-213ENST00000597215 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
VRK3-213ENST00000597215 RHPN1Q8TCX5 695 aa17.7■□□□□ 0.42
VRK3-213ENST00000597215 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
VRK3-213ENST00000597215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.7■□□□□ 0.42
VRK3-213ENST00000597215 YDJCA8MPS7 323 aa17.69■□□□□ 0.42
VRK3-213ENST00000597215 HIBADHP31937 336 aaKnown RBP17.69■□□□□ 0.42
VRK3-213ENST00000597215 GYG1P46976 350 aa17.69■□□□□ 0.42
VRK3-213ENST00000597215 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
VRK3-213ENST00000597215 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
VRK3-213ENST00000597215 FAM84BQ96KN1 310 aaPredicted RBP17.69■□□□□ 0.42
VRK3-213ENST00000597215 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
VRK3-213ENST00000597215 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
VRK3-213ENST00000597215 ZNF541Q9H0D2 1346 aa17.69■□□□□ 0.42
VRK3-213ENST00000597215 PSME4Q14997 1843 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 SCN9AQ15858 1988 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 YY1P25490 414 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 TIMM10P62072 90 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 CIAPIN1Q6FI81 312 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 FBXO33Q7Z6M2 555 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
VRK3-213ENST00000597215 GLTPD2A6NH11 291 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 RAD17O75943 681 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 IL1R1P14778 569 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 CXCL9Q07325 125 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 TNIP1Q15025 636 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 CLASRPQ8N2M8 674 aaKnown RBP17.67■□□□□ 0.42
VRK3-213ENST00000597215 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 XAGE2Q96GT9 111 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 IL1RAPL2Q9NP60 686 aa17.67■□□□□ 0.42
VRK3-213ENST00000597215 ADORA1P30542 326 aa17.66■□□□□ 0.42
VRK3-213ENST00000597215 BCAMP50895 628 aa17.66■□□□□ 0.42
VRK3-213ENST00000597215 GORABQ5T7V8 394 aa17.66■□□□□ 0.42
VRK3-213ENST00000597215 GPC2Q8N158 579 aa17.66■□□□□ 0.42
VRK3-213ENST00000597215 GNL3LQ9NVN8 582 aaKnown RBP17.66■□□□□ 0.42
VRK3-213ENST00000597215 KDM2BQ8NHM5 1336 aa17.66■□□□□ 0.42
VRK3-213ENST00000597215 MYH13Q9UKX3 1938 aa17.65■□□□□ 0.42
VRK3-213ENST00000597215 USP17L3A6NCW0 530 aa17.65■□□□□ 0.42
VRK3-213ENST00000597215 USP17L4A6NCW7 530 aa17.65■□□□□ 0.42
VRK3-213ENST00000597215 USP17L1Q7RTZ2 530 aa17.65■□□□□ 0.42
VRK3-213ENST00000597215 AACSQ86V21 672 aa17.65■□□□□ 0.42
VRK3-213ENST00000597215 TDRD7Q8NHU6 1098 aaKnown RBP17.65■□□□□ 0.42
VRK3-213ENST00000597215 EAF2Q96CJ1 260 aaPredicted RBP17.65■□□□□ 0.42
VRK3-213ENST00000597215 GJA3Q9Y6H8 435 aa17.65■□□□□ 0.42
VRK3-213ENST00000597215 PSMD14O00487 310 aa17.64■□□□□ 0.41
VRK3-213ENST00000597215 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
VRK3-213ENST00000597215 DDNO94850 711 aaPredicted RBP17.64■□□□□ 0.41
VRK3-213ENST00000597215 STRIP1Q5VSL9 837 aa17.64■□□□□ 0.41
VRK3-213ENST00000597215 CCDC102BQ68D86 513 aa17.64■□□□□ 0.41
VRK3-213ENST00000597215 FBXW7Q969H0 707 aa17.64■□□□□ 0.41
VRK3-213ENST00000597215 DBNDD2Q9BQY9 259 aa17.64■□□□□ 0.41
VRK3-213ENST00000597215 KCNQ5Q9NR82 932 aa17.64■□□□□ 0.41
VRK3-213ENST00000597215 ZNF646O15015 1829 aaPredicted RBP17.63■□□□□ 0.41
VRK3-213ENST00000597215 IGHDP01880 384 aa17.63■□□□□ 0.41
VRK3-213ENST00000597215 VIL1P09327 827 aaKnown RBP17.63■□□□□ 0.41
VRK3-213ENST00000597215 PHKA1P46020 1223 aa17.63■□□□□ 0.41
VRK3-213ENST00000597215 GTF2IP78347 998 aa17.63■□□□□ 0.41
VRK3-213ENST00000597215 TTLL5Q6EMB2 1281 aa17.63■□□□□ 0.41
VRK3-213ENST00000597215 CCDC8Q9H0W5 538 aaPredicted RBP17.63■□□□□ 0.41
VRK3-213ENST00000597215 ZBTB47Q9UFB7 747 aaPredicted RBP17.63■□□□□ 0.41
VRK3-213ENST00000597215 DBNLQ9UJU6 430 aaKnown RBP17.63■□□□□ 0.41
VRK3-213ENST00000597215 WDR90Q96KV7 1748 aa17.62■□□□□ 0.41
VRK3-213ENST00000597215 SEMA3EO15041 775 aa17.62■□□□□ 0.41
VRK3-213ENST00000597215 ZBTB22O15209 634 aa17.62■□□□□ 0.41
VRK3-213ENST00000597215 SMARCA5O60264 1052 aaPredicted RBP17.62■□□□□ 0.41
VRK3-213ENST00000597215 IFIT2P09913 472 aaKnown RBP17.62■□□□□ 0.41
VRK3-213ENST00000597215 CCDC158Q5M9N0 1113 aa17.62■□□□□ 0.41
VRK3-213ENST00000597215 SMC5Q8IY18 1101 aa17.62■□□□□ 0.41
VRK3-213ENST00000597215 L3MBTL3Q96JM7 780 aaPredicted RBP17.62■□□□□ 0.41
VRK3-213ENST00000597215 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
VRK3-213ENST00000597215 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
VRK3-213ENST00000597215 IQSEC3Q9UPP2 1182 aaPredicted RBP17.62■□□□□ 0.41
VRK3-213ENST00000597215 UQCRFS1P1P0C7P4 283 aa17.61■□□□□ 0.41
VRK3-213ENST00000597215 RPS12P25398 132 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms