RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 PUM3Q15397 648 aaKnown RBP11.46□□□□□ -0.57
ZNF548-206ENST00000597047 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 NIM1KQ8IY84 436 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 PSMD1Q99460 953 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 LRRCC1Q9C099 1032 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 DCTPP1Q9H773 170 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 JAG2Q9Y219 1238 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 AKAP2Q9Y2D5 859 aa11.46□□□□□ -0.57
ZNF548-206ENST00000597047 NOP58Q9Y2X3 529 aaKnown RBP11.46□□□□□ -0.57
ZNF548-206ENST00000597047 FER1L6Q2WGJ9 1857 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 A0A1B0GUL7 405 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 IFIT2P09913 472 aaKnown RBP11.45□□□□□ -0.58
ZNF548-206ENST00000597047 PRELPP51888 382 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 HDAC1Q13547 482 aaPredicted RBP11.45□□□□□ -0.58
ZNF548-206ENST00000597047 UBE4AQ14139 1066 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 AACSQ86V21 672 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 CLASRPQ8N2M8 674 aaKnown RBP11.45□□□□□ -0.58
ZNF548-206ENST00000597047 KIF1BPQ96EK5 621 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
ZNF548-206ENST00000597047 LRRC37AA6NMS7 1700 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 ECE2O60344 883 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 RAD17O75943 681 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
ZNF548-206ENST00000597047 BCAMP50895 628 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 CHAF1AQ13111 956 aaPredicted RBP11.44□□□□□ -0.58
ZNF548-206ENST00000597047 TNNI3KQ59H18 835 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 ZNF804AQ7Z570 1209 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 VGLL2Q8N8G2 317 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 LPIN2Q92539 896 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 XAGE2Q96GT9 111 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
ZNF548-206ENST00000597047 FPGT-TNNI3KV9GXZ4 949 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 GOLGB1Q14789 3259 aaKnown RBP11.44□□□□□ -0.58
ZNF548-206ENST00000597047 A0A1B0GUL6 1792 aa11.44□□□□□ -0.58
ZNF548-206ENST00000597047 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
ZNF548-206ENST00000597047 KIAA2012Q0VF49 1180 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 C16orf71Q8IYS4 520 aaPredicted RBP11.43□□□□□ -0.58
ZNF548-206ENST00000597047 ZNF526Q8TF50 670 aaPredicted RBP11.43□□□□□ -0.58
ZNF548-206ENST00000597047 EAF2Q96CJ1 260 aaPredicted RBP11.43□□□□□ -0.58
ZNF548-206ENST00000597047 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 DBNDD2Q9BQY9 259 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 LNPKQ9C0E8 428 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 KCNQ5Q9NR82 932 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 CHD4Q14839 1912 aa11.43□□□□□ -0.58
ZNF548-206ENST00000597047 SBF1O95248 1867 aa11.42□□□□□ -0.58
ZNF548-206ENST00000597047 FGFR2P21802 821 aa11.42□□□□□ -0.58
ZNF548-206ENST00000597047 CCDC158Q5M9N0 1113 aa11.42□□□□□ -0.58
ZNF548-206ENST00000597047 FAM84BQ96KN1 310 aaPredicted RBP11.42□□□□□ -0.58
ZNF548-206ENST00000597047 TLR7Q9NYK1 1049 aaKnown RBP11.42□□□□□ -0.58
ZNF548-206ENST00000597047 MED23Q9ULK4 1368 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 DUOX1Q9NRD9 1551 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 PHKA1P46020 1223 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 GTF2IP78347 998 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 COA1Q9GZY4 146 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 CD209Q9NNX6 404 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 SNRKQ9NRH2 765 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 GNL3LQ9NVN8 582 aaKnown RBP11.41□□□□□ -0.58
ZNF548-206ENST00000597047 ZNRF3Q9ULT6 936 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 UTRNP46939 3433 aa11.41□□□□□ -0.58
ZNF548-206ENST00000597047 TSHZ3Q63HK5 1081 aa11.4□□□□□ -0.58
ZNF548-206ENST00000597047 CCDC102BQ68D86 513 aa11.4□□□□□ -0.58
ZNF548-206ENST00000597047 ZNF784Q8NCA9 323 aaPredicted RBP11.4□□□□□ -0.58
ZNF548-206ENST00000597047 MXD3Q9BW11 206 aa11.4□□□□□ -0.58
ZNF548-206ENST00000597047 GPR108Q9NPR9 543 aa11.4□□□□□ -0.58
ZNF548-206ENST00000597047 ZNF609O15014 1411 aa11.4□□□□□ -0.58
ZNF548-206ENST00000597047 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
ZNF548-206ENST00000597047 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 YDJCA8MPS7 323 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 F8W031 263 aaPredicted RBP11.39□□□□□ -0.59
ZNF548-206ENST00000597047 DDNO94850 711 aaPredicted RBP11.39□□□□□ -0.59
ZNF548-206ENST00000597047 CXCL9Q07325 125 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 LTBP1Q14766 1721 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 CIAPIN1Q6FI81 312 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 DPY19L2Q6NUT2 758 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 FBXO33Q7Z6M2 555 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
ZNF548-206ENST00000597047 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 DBNLQ9UJU6 430 aaKnown RBP11.39□□□□□ -0.59
ZNF548-206ENST00000597047 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
ZNF548-206ENST00000597047 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
ZNF548-206ENST00000597047 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 PSMD14O00487 310 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 MAP4K4O95819 1239 aaPredicted RBP11.38□□□□□ -0.59
ZNF548-206ENST00000597047 TNIP1Q15025 636 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 PODNQ7Z5L7 613 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 SMC5Q8IY18 1101 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 DNAJC2Q99543 621 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms