RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CNOT7Q9UIV1 285 aaKnown RBP26.43■■□□□ 1.82
PNKP-209ENST00000596726 ZNF609O15014 1411 aa26.42■■□□□ 1.82
PNKP-209ENST00000596726 CLEC11AQ9Y240 323 aa26.42■■□□□ 1.82
PNKP-209ENST00000596726 LRRFIP2Q9Y608 721 aaKnown RBP26.42■■□□□ 1.82
PNKP-209ENST00000596726 GNAI3P08754 354 aa26.41■■□□□ 1.82
PNKP-209ENST00000596726 LRRC24Q50LG9 513 aa26.41■■□□□ 1.82
PNKP-209ENST00000596726 KLHDC4Q8TBB5 520 aa26.41■■□□□ 1.82
PNKP-209ENST00000596726 MROH5Q6ZUA9 1318 aa26.4■■□□□ 1.82
PNKP-209ENST00000596726 SHTN1A0MZ66 631 aa26.4■■□□□ 1.82
PNKP-209ENST00000596726 PLIN1O60240 522 aa26.4■■□□□ 1.82
PNKP-209ENST00000596726 MICALL2Q8IY33 904 aa26.4■■□□□ 1.82
PNKP-209ENST00000596726 TMEM57Q8N5G2 664 aa26.4■■□□□ 1.82
PNKP-209ENST00000596726 USP17L3A6NCW0 530 aa26.39■■□□□ 1.82
PNKP-209ENST00000596726 USP17L4A6NCW7 530 aa26.39■■□□□ 1.82
PNKP-209ENST00000596726 H7C1D1 291 aa26.39■■□□□ 1.82
PNKP-209ENST00000596726 ITGBL1O95965 494 aaPredicted RBP26.39■■□□□ 1.82
PNKP-209ENST00000596726 PTPN12Q05209 780 aaKnown RBP26.39■■□□□ 1.82
PNKP-209ENST00000596726 UBE4AQ14139 1066 aa26.39■■□□□ 1.82
PNKP-209ENST00000596726 RSBN1LQ6PCB5 846 aaPredicted RBP26.39■■□□□ 1.82
PNKP-209ENST00000596726 USP17L1Q7RTZ2 530 aa26.39■■□□□ 1.82
PNKP-209ENST00000596726 GMLQ99445 158 aa26.39■■□□□ 1.82
PNKP-209ENST00000596726 MAP1SQ66K74 1059 aaPredicted RBP26.38■■□□□ 1.81
PNKP-209ENST00000596726 AGBL3Q8NEM8 1001 aa26.38■■□□□ 1.81
PNKP-209ENST00000596726 CD209Q9NNX6 404 aa26.38■■□□□ 1.81
PNKP-209ENST00000596726 PASKQ96RG2 1323 aa26.38■■□□□ 1.81
PNKP-209ENST00000596726 HIRAP54198 1017 aaPredicted RBP26.37■■□□□ 1.81
PNKP-209ENST00000596726 CNTROBQ8N137 903 aa26.37■■□□□ 1.81
PNKP-209ENST00000596726 PGAP2Q9UHJ9 254 aa26.37■■□□□ 1.81
PNKP-209ENST00000596726 DACT2Q5SW24 774 aa26.36■■□□□ 1.81
PNKP-209ENST00000596726 STRIP1Q5VSL9 837 aa26.36■■□□□ 1.81
PNKP-209ENST00000596726 VGLL2Q8N8G2 317 aa26.36■■□□□ 1.81
PNKP-209ENST00000596726 TRPM4Q8TD43 1214 aa26.36■■□□□ 1.81
PNKP-209ENST00000596726 EYA2O00167 538 aa26.35■■□□□ 1.81
PNKP-209ENST00000596726 DZIP1LQ8IYY4 767 aaKnown RBP26.35■■□□□ 1.81
PNKP-209ENST00000596726 RLBP1P12271 317 aa26.34■■□□□ 1.81
PNKP-209ENST00000596726 IL1R1P14778 569 aa26.34■■□□□ 1.81
PNKP-209ENST00000596726 MTX1Q13505 466 aa26.34■■□□□ 1.81
PNKP-209ENST00000596726 METTL24Q5JXM2 366 aa26.34■■□□□ 1.81
PNKP-209ENST00000596726 SAMD7Q7Z3H4 446 aa26.34■■□□□ 1.81
PNKP-209ENST00000596726 ZC3H15Q8WU90 426 aaKnown RBP26.34■■□□□ 1.81
PNKP-209ENST00000596726 FBXO3Q9UK99 471 aa26.34■■□□□ 1.81
PNKP-209ENST00000596726 PDE8BO95263 885 aa26.33■■□□□ 1.81
PNKP-209ENST00000596726 ZNF280AP59817 542 aaPredicted RBP26.33■■□□□ 1.81
PNKP-209ENST00000596726 HTRA3P83110 453 aa26.33■■□□□ 1.81
PNKP-209ENST00000596726 TTLL5Q6EMB2 1281 aa26.33■■□□□ 1.81
PNKP-209ENST00000596726 ATG9AQ7Z3C6 839 aa26.33■■□□□ 1.81
PNKP-209ENST00000596726 ZNF804AQ7Z570 1209 aa26.33■■□□□ 1.81
PNKP-209ENST00000596726 DNAJC5GQ8N7S2 189 aa26.33■■□□□ 1.81
PNKP-209ENST00000596726 EGFRP00533 1210 aa26.32■■□□□ 1.8
PNKP-209ENST00000596726 GNAI2P04899 355 aa26.32■■□□□ 1.8
PNKP-209ENST00000596726 FTSJ3Q8IY81 847 aaKnown RBP26.32■■□□□ 1.8
PNKP-209ENST00000596726 POLR2AP24928 1970 aaKnown RBP26.31■■□□□ 1.8
PNKP-209ENST00000596726 CIAO1O76071 339 aa26.31■■□□□ 1.8
PNKP-209ENST00000596726 TBC1D10BQ4KMP7 808 aaPredicted RBP26.31■■□□□ 1.8
PNKP-209ENST00000596726 MXD3Q9BW11 206 aa26.31■■□□□ 1.8
PNKP-209ENST00000596726 COPRSQ9NQ92 184 aa26.31■■□□□ 1.8
PNKP-209ENST00000596726 MYO3BQ8WXR4 1341 aa26.31■■□□□ 1.8
PNKP-209ENST00000596726 GTF2IP78347 998 aa26.3■■□□□ 1.8
PNKP-209ENST00000596726 FAM84BQ96KN1 310 aaPredicted RBP26.3■■□□□ 1.8
PNKP-209ENST00000596726 RCAN3Q9UKA8 241 aa26.3■■□□□ 1.8
PNKP-209ENST00000596726 USP17L8P0C7I0 530 aa26.29■■□□□ 1.8
PNKP-209ENST00000596726 FGFR2P21802 821 aa26.29■■□□□ 1.8
PNKP-209ENST00000596726 FBXW7Q969H0 707 aa26.29■■□□□ 1.8
PNKP-209ENST00000596726 PA2G4Q9UQ80 394 aaKnown RBP26.29■■□□□ 1.8
PNKP-209ENST00000596726 TRPM7Q96QT4 1865 aa26.29■■□□□ 1.8
PNKP-209ENST00000596726 HIBADHP31937 336 aaKnown RBP26.28■■□□□ 1.8
PNKP-209ENST00000596726 GYG1P46976 350 aa26.28■■□□□ 1.8
PNKP-209ENST00000596726 KIF4BQ2VIQ3 1234 aa26.28■■□□□ 1.8
PNKP-209ENST00000596726 FBXO33Q7Z6M2 555 aa26.28■■□□□ 1.8
PNKP-209ENST00000596726 TDRD7Q8NHU6 1098 aaKnown RBP26.28■■□□□ 1.8
PNKP-209ENST00000596726 SIL1Q9H173 461 aa26.28■■□□□ 1.8
PNKP-209ENST00000596726 ZBTB7BO15156 539 aaPredicted RBP26.27■■□□□ 1.8
PNKP-209ENST00000596726 SRGAP3O43295 1099 aa26.27■■□□□ 1.8
PNKP-209ENST00000596726 RBM26Q5T8P6 1007 aaKnown RBP26.27■■□□□ 1.8
PNKP-209ENST00000596726 CREBZFQ9NS37 354 aa26.27■■□□□ 1.8
PNKP-209ENST00000596726 MMP14P50281 582 aa26.26■■□□□ 1.79
PNKP-209ENST00000596726 FKBP1AP62942 108 aaKnown RBP26.26■■□□□ 1.79
PNKP-209ENST00000596726 PUM3Q15397 648 aaKnown RBP26.26■■□□□ 1.79
PNKP-209ENST00000596726 ITPRIPQ8IWB1 547 aa26.26■■□□□ 1.79
PNKP-209ENST00000596726 FAM205AQ6ZU69 1335 aa26.25■■□□□ 1.79
PNKP-209ENST00000596726 SASH1O94885 1247 aa26.25■■□□□ 1.79
PNKP-209ENST00000596726 IL15P40933 162 aaPredicted RBP26.25■■□□□ 1.79
PNKP-209ENST00000596726 PANK1Q8TE04 598 aa26.25■■□□□ 1.79
PNKP-209ENST00000596726 MYOZ2Q9NPC6 264 aa26.25■■□□□ 1.79
PNKP-209ENST00000596726 TMEM88BA6NKF7 163 aa26.24■■□□□ 1.79
PNKP-209ENST00000596726 MS4A1P11836 297 aa26.24■■□□□ 1.79
PNKP-209ENST00000596726 FMR1Q06787 632 aaKnown RBP eCLIP26.24■■□□□ 1.79
PNKP-209ENST00000596726 CERS5Q8N5B7 392 aa26.24■■□□□ 1.79
PNKP-209ENST00000596726 GLIS2Q9BZE0 524 aaPredicted RBP26.24■■□□□ 1.79
PNKP-209ENST00000596726 PNMA6EA0A0J9YXQ4 647 aa26.23■■□□□ 1.79
PNKP-209ENST00000596726 TRAF5O00463 557 aa26.23■■□□□ 1.79
PNKP-209ENST00000596726 IFIT1P09914 478 aaKnown RBP26.23■■□□□ 1.79
PNKP-209ENST00000596726 CDC37L1Q7L3B6 337 aa26.23■■□□□ 1.79
PNKP-209ENST00000596726 LPIN2Q92539 896 aa26.23■■□□□ 1.79
PNKP-209ENST00000596726 CEP126Q9P2H0 1117 aa26.23■■□□□ 1.79
PNKP-209ENST00000596726 CAVIN4Q5BKX8 364 aa26.22■■□□□ 1.79
PNKP-209ENST00000596726 KIAA0825Q8IV33 1275 aa26.22■■□□□ 1.79
PNKP-209ENST00000596726 OGFOD1Q8N543 542 aa26.22■■□□□ 1.79
PNKP-209ENST00000596726 KLRG1Q96E93 195 aa26.22■■□□□ 1.79
PNKP-209ENST00000596726 SLC5A1P13866 664 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms