RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 ZNF157P51786 506 aaPredicted RBP20.6■□□□□ 0.89
LIM2-202ENST00000596399 CASP7P55210 303 aa20.6■□□□□ 0.89
LIM2-202ENST00000596399 PODNQ7Z5L7 613 aa20.6■□□□□ 0.89
LIM2-202ENST00000596399 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
LIM2-202ENST00000596399 IL16Q14005 1332 aa20.59■□□□□ 0.89
LIM2-202ENST00000596399 CCDC85CA6NKD9 419 aa20.59■□□□□ 0.89
LIM2-202ENST00000596399 ITGA6P23229 1130 aa20.59■□□□□ 0.89
LIM2-202ENST00000596399 KIF23Q02241 960 aaPredicted RBP20.59■□□□□ 0.89
LIM2-202ENST00000596399 FKBP5Q13451 457 aaPredicted RBP20.59■□□□□ 0.89
LIM2-202ENST00000596399 FAM161AQ3B820 660 aa20.59■□□□□ 0.89
LIM2-202ENST00000596399 PRAMEF18Q5VWM3 479 aa20.59■□□□□ 0.89
LIM2-202ENST00000596399 ZNF609O15014 1411 aa20.59■□□□□ 0.89
LIM2-202ENST00000596399 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
LIM2-202ENST00000596399 CA12O43570 354 aa20.58■□□□□ 0.89
LIM2-202ENST00000596399 NBPF9Q3BBW0 867 aa20.58■□□□□ 0.89
LIM2-202ENST00000596399 DACT2Q5SW24 774 aa20.58■□□□□ 0.89
LIM2-202ENST00000596399 MOB2Q70IA6 237 aa20.58■□□□□ 0.89
LIM2-202ENST00000596399 MCOLN1Q9GZU1 580 aa20.58■□□□□ 0.89
LIM2-202ENST00000596399 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.89
LIM2-202ENST00000596399 ZNF646O15015 1829 aaPredicted RBP20.57■□□□□ 0.88
LIM2-202ENST00000596399 VAMP4O75379 141 aa20.57■□□□□ 0.88
LIM2-202ENST00000596399 EXOSC9Q06265 439 aaKnown RBP20.57■□□□□ 0.88
LIM2-202ENST00000596399 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
LIM2-202ENST00000596399 SNAP23O00161 211 aa20.56■□□□□ 0.88
LIM2-202ENST00000596399 IGHMBP2P38935 993 aaKnown RBP20.56■□□□□ 0.88
LIM2-202ENST00000596399 CCDC102AQ96A19 550 aa20.56■□□□□ 0.88
LIM2-202ENST00000596399 PLA2G12BQ9BX93 195 aa20.56■□□□□ 0.88
LIM2-202ENST00000596399 F6X3S4 739 aa20.55■□□□□ 0.88
LIM2-202ENST00000596399 CSF1RP07333 972 aa20.55■□□□□ 0.88
LIM2-202ENST00000596399 SLC10A3P09131 477 aa20.55■□□□□ 0.88
LIM2-202ENST00000596399 LINS1Q8NG48 757 aa20.55■□□□□ 0.88
LIM2-202ENST00000596399 ZNF804BA4D1E1 1349 aa20.54■□□□□ 0.88
LIM2-202ENST00000596399 TRPA1O75762 1119 aa20.54■□□□□ 0.88
LIM2-202ENST00000596399 CSRNP1Q96S65 589 aa20.54■□□□□ 0.88
LIM2-202ENST00000596399 COA1Q9GZY4 146 aa20.54■□□□□ 0.88
LIM2-202ENST00000596399 LEMD3Q9Y2U8 911 aa20.54■□□□□ 0.88
LIM2-202ENST00000596399 SASH1O94885 1247 aa20.53■□□□□ 0.88
LIM2-202ENST00000596399 DGKZQ13574 1117 aa20.53■□□□□ 0.88
LIM2-202ENST00000596399 HELBQ8NG08 1087 aaPredicted RBP20.53■□□□□ 0.88
LIM2-202ENST00000596399 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
LIM2-202ENST00000596399 MYH16Q9H6N6 1097 aa20.53■□□□□ 0.88
LIM2-202ENST00000596399 RNF186Q9NXI6 227 aa20.53■□□□□ 0.88
LIM2-202ENST00000596399 UBE2Q2LH0YL09 131 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 WNT10BO00744 389 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 TAF5LO75529 589 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 FOXO4P98177 505 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 CHRNDQ07001 517 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.88
LIM2-202ENST00000596399 STRIP1Q5VSL9 837 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 RASAL3Q86YV0 1011 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 WDR63Q8IWG1 891 aa20.52■□□□□ 0.88
LIM2-202ENST00000596399 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
LIM2-202ENST00000596399 ANP32CO43423 234 aa20.51■□□□□ 0.87
LIM2-202ENST00000596399 GTF2IP78347 998 aa20.51■□□□□ 0.87
LIM2-202ENST00000596399 TTLL5Q6EMB2 1281 aa20.51■□□□□ 0.87
LIM2-202ENST00000596399 KIAA0825Q8IV33 1275 aa20.51■□□□□ 0.87
LIM2-202ENST00000596399 ANKRD2Q9GZV1 360 aa20.51■□□□□ 0.87
LIM2-202ENST00000596399 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
LIM2-202ENST00000596399 BEND3Q5T5X7 828 aa20.5■□□□□ 0.87
LIM2-202ENST00000596399 OGFOD1Q8N543 542 aa20.5■□□□□ 0.87
LIM2-202ENST00000596399 ANKRD18BA2A2Z9 1011 aa20.49■□□□□ 0.87
LIM2-202ENST00000596399 KCNJ4P48050 445 aa20.49■□□□□ 0.87
LIM2-202ENST00000596399 SAGE1Q9NXZ1 904 aa20.49■□□□□ 0.87
LIM2-202ENST00000596399 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
LIM2-202ENST00000596399 IRS2Q9Y4H2 1338 aa20.49■□□□□ 0.87
LIM2-202ENST00000596399 PAPPA2Q9BXP8 1791 aa20.49■□□□□ 0.87
LIM2-202ENST00000596399 ZNF594Q96JF6 807 aaPredicted RBP20.48■□□□□ 0.87
LIM2-202ENST00000596399 FKBP1BP68106 108 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 PRKG1Q13976 671 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 TTLL12Q14166 644 aaPredicted RBP20.47■□□□□ 0.87
LIM2-202ENST00000596399 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 FAM9BQ8IZU0 186 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 CERS5Q8N5B7 392 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 CD209Q9NNX6 404 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 MYO3BQ8WXR4 1341 aa20.47■□□□□ 0.87
LIM2-202ENST00000596399 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
LIM2-202ENST00000596399 MKRN3Q13064 507 aaKnown RBP20.46■□□□□ 0.87
LIM2-202ENST00000596399 IFIT5Q13325 482 aaKnown RBP20.46■□□□□ 0.87
LIM2-202ENST00000596399 JAG2Q9Y219 1238 aa20.46■□□□□ 0.87
LIM2-202ENST00000596399 ZBED3Q96IU2 234 aaPredicted RBP20.45■□□□□ 0.86
LIM2-202ENST00000596399 AKAP11Q9UKA4 1901 aa20.45■□□□□ 0.86
LIM2-202ENST00000596399 CACNA1FO60840 1977 aa20.45■□□□□ 0.86
LIM2-202ENST00000596399 A0A1B0GUL6 1792 aa20.44■□□□□ 0.86
LIM2-202ENST00000596399 F8W031 263 aaPredicted RBP20.44■□□□□ 0.86
LIM2-202ENST00000596399 PLIN1O60240 522 aa20.44■□□□□ 0.86
LIM2-202ENST00000596399 RGS19P49795 217 aa20.44■□□□□ 0.86
LIM2-202ENST00000596399 GRM8O00222 908 aa20.43■□□□□ 0.86
LIM2-202ENST00000596399 MLLT1Q03111 559 aaPredicted RBP20.43■□□□□ 0.86
LIM2-202ENST00000596399 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
LIM2-202ENST00000596399 HDAC9Q9UKV0 1011 aa20.43■□□□□ 0.86
LIM2-202ENST00000596399 PTPN12Q05209 780 aaKnown RBP20.42■□□□□ 0.86
LIM2-202ENST00000596399 AOX1Q06278 1338 aa20.42■□□□□ 0.86
LIM2-202ENST00000596399 TBC1D8O95759 1140 aa20.41■□□□□ 0.86
LIM2-202ENST00000596399 C15orf52Q6ZUT6 534 aaKnown RBP20.41■□□□□ 0.86
LIM2-202ENST00000596399 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.41■□□□□ 0.86
LIM2-202ENST00000596399 TNRC18O15417 2968 aaPredicted RBP20.4■□□□□ 0.86
LIM2-202ENST00000596399 IL1R1P14778 569 aa20.4■□□□□ 0.86
LIM2-202ENST00000596399 DLGAP5Q15398 846 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms