RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-208ENST00000596304 USP17L1Q7RTZ2 530 aa17.61■□□□□ 0.41
UBA52-208ENST00000596304 UBE3BQ7Z3V4 1068 aa17.61■□□□□ 0.41
UBA52-208ENST00000596304 MYOZ2Q9NPC6 264 aa17.61■□□□□ 0.41
UBA52-208ENST00000596304 SCAF8Q9UPN6 1271 aaKnown RBP17.61■□□□□ 0.41
UBA52-208ENST00000596304 H7C1W4 665 aa17.6■□□□□ 0.41
UBA52-208ENST00000596304 SLC10A3P09131 477 aa17.6■□□□□ 0.41
UBA52-208ENST00000596304 CCT4P50991 539 aaKnown RBP17.6■□□□□ 0.41
UBA52-208ENST00000596304 CCDC102AQ96A19 550 aa17.6■□□□□ 0.41
UBA52-208ENST00000596304 MXD3Q9BW11 206 aa17.6■□□□□ 0.41
UBA52-208ENST00000596304 DGKZQ13574 1117 aa17.59■□□□□ 0.41
UBA52-208ENST00000596304 TXNRD3Q86VQ6 643 aa17.59■□□□□ 0.41
UBA52-208ENST00000596304 PITPNM2Q9BZ72 1349 aa17.58■□□□□ 0.4
UBA52-208ENST00000596304 FLIIQ13045 1269 aa17.58■□□□□ 0.4
UBA52-208ENST00000596304 FBXW7Q969H0 707 aa17.58■□□□□ 0.4
UBA52-208ENST00000596304 IL16Q14005 1332 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
UBA52-208ENST00000596304 CASP7P55210 303 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 GCKRQ14397 625 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 NBPF9Q3BBW0 867 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 DACT2Q5SW24 774 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 RASAL3Q86YV0 1011 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 PLA2G12BQ9BX93 195 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 RNF186Q9NXI6 227 aa17.57■□□□□ 0.4
UBA52-208ENST00000596304 ECM29Q5VYK3 1845 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 TRPA1O75762 1119 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 ITGA6P23229 1130 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 KLRK1P26718 216 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 FKBP5Q13451 457 aaPredicted RBP17.56■□□□□ 0.4
UBA52-208ENST00000596304 PRAMEF18Q5VWM3 479 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 MOB2Q70IA6 237 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 DNAAF4Q8WXU2 420 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 CSRNP1Q96S65 589 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 SAGE1Q9NXZ1 904 aa17.56■□□□□ 0.4
UBA52-208ENST00000596304 RGS19P49795 217 aa17.55■□□□□ 0.4
UBA52-208ENST00000596304 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
UBA52-208ENST00000596304 SALL2Q9Y467 1007 aaPredicted RBP17.55■□□□□ 0.4
UBA52-208ENST00000596304 ZNF804BA4D1E1 1349 aa17.54■□□□□ 0.4
UBA52-208ENST00000596304 WNT10BO00744 389 aa17.54■□□□□ 0.4
UBA52-208ENST00000596304 CSF1RP07333 972 aa17.54■□□□□ 0.4
UBA52-208ENST00000596304 STRIP1Q5VSL9 837 aa17.54■□□□□ 0.4
UBA52-208ENST00000596304 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
UBA52-208ENST00000596304 MYO3BQ8WXR4 1341 aa17.53■□□□□ 0.4
UBA52-208ENST00000596304 VAMP4O75379 141 aa17.53■□□□□ 0.4
UBA52-208ENST00000596304 SASH1O94885 1247 aa17.53■□□□□ 0.4
UBA52-208ENST00000596304 FKBP1BP68106 108 aa17.53■□□□□ 0.4
UBA52-208ENST00000596304 MLLT1Q03111 559 aaPredicted RBP17.53■□□□□ 0.4
UBA52-208ENST00000596304 LINS1Q8NG48 757 aa17.53■□□□□ 0.4
UBA52-208ENST00000596304 MPHOSPH8Q99549 860 aa17.53■□□□□ 0.4
UBA52-208ENST00000596304 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
UBA52-208ENST00000596304 UBE2Q2LH0YL09 131 aa17.52■□□□□ 0.4
UBA52-208ENST00000596304 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.4
UBA52-208ENST00000596304 CHRNDQ07001 517 aa17.52■□□□□ 0.4
UBA52-208ENST00000596304 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
UBA52-208ENST00000596304 TTLL5Q6EMB2 1281 aa17.52■□□□□ 0.4
UBA52-208ENST00000596304 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
UBA52-208ENST00000596304 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
UBA52-208ENST00000596304 SNAP23O00161 211 aa17.51■□□□□ 0.39
UBA52-208ENST00000596304 GTF2IP78347 998 aa17.51■□□□□ 0.39
UBA52-208ENST00000596304 KIAA0825Q8IV33 1275 aa17.51■□□□□ 0.39
UBA52-208ENST00000596304 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
UBA52-208ENST00000596304 F6X3S4 739 aa17.5■□□□□ 0.39
UBA52-208ENST00000596304 KCNJ4P48050 445 aa17.5■□□□□ 0.39
UBA52-208ENST00000596304 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
UBA52-208ENST00000596304 IRS2Q9Y4H2 1338 aa17.49■□□□□ 0.39
UBA52-208ENST00000596304 TAF5LO75529 589 aa17.49■□□□□ 0.39
UBA52-208ENST00000596304 FOXO4P98177 505 aa17.49■□□□□ 0.39
UBA52-208ENST00000596304 WDR63Q8IWG1 891 aa17.49■□□□□ 0.39
UBA52-208ENST00000596304 HELBQ8NG08 1087 aaPredicted RBP17.49■□□□□ 0.39
UBA52-208ENST00000596304 CD209Q9NNX6 404 aa17.49■□□□□ 0.39
UBA52-208ENST00000596304 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
UBA52-208ENST00000596304 BEND3Q5T5X7 828 aa17.48■□□□□ 0.39
UBA52-208ENST00000596304 REM2Q8IYK8 340 aaPredicted RBP17.48■□□□□ 0.39
UBA52-208ENST00000596304 ZBED3Q96IU2 234 aaPredicted RBP17.48■□□□□ 0.39
UBA52-208ENST00000596304 HDAC9Q9UKV0 1011 aa17.48■□□□□ 0.39
UBA52-208ENST00000596304 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
UBA52-208ENST00000596304 NF2P35240 595 aa17.47■□□□□ 0.39
UBA52-208ENST00000596304 MKRN3Q13064 507 aaKnown RBP17.47■□□□□ 0.39
UBA52-208ENST00000596304 PRKG1Q13976 671 aa17.47■□□□□ 0.39
UBA52-208ENST00000596304 CERS5Q8N5B7 392 aa17.47■□□□□ 0.39
UBA52-208ENST00000596304 MMP14P50281 582 aa17.46■□□□□ 0.39
UBA52-208ENST00000596304 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
UBA52-208ENST00000596304 EPHA10Q5JZY3 1008 aa17.46■□□□□ 0.39
UBA52-208ENST00000596304 APOBEC3FQ8IUX4 373 aaKnown RBP17.46■□□□□ 0.39
UBA52-208ENST00000596304 FZD1Q9UP38 647 aa17.46■□□□□ 0.39
UBA52-208ENST00000596304 PCDHAC2Q9Y5I4 1007 aa17.46■□□□□ 0.39
UBA52-208ENST00000596304 LAMB1P07942 1786 aa17.45■□□□□ 0.38
UBA52-208ENST00000596304 ANP32CO43423 234 aa17.45■□□□□ 0.38
UBA52-208ENST00000596304 TBC1D8O95759 1140 aa17.45■□□□□ 0.38
UBA52-208ENST00000596304 PTPN12Q05209 780 aaKnown RBP17.45■□□□□ 0.38
UBA52-208ENST00000596304 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
UBA52-208ENST00000596304 C15orf52Q6ZUT6 534 aaKnown RBP17.45■□□□□ 0.38
UBA52-208ENST00000596304 CTU1Q7Z7A3 348 aaKnown RBP17.45■□□□□ 0.38
UBA52-208ENST00000596304 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
UBA52-208ENST00000596304 ARAP2Q8WZ64 1704 aa17.44■□□□□ 0.38
UBA52-208ENST00000596304 ARMC9Q7Z3E5 817 aa17.44■□□□□ 0.38
UBA52-208ENST00000596304 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
UBA52-208ENST00000596304 F8W031 263 aaPredicted RBP17.43■□□□□ 0.38
UBA52-208ENST00000596304 TM4SF4P48230 202 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms