RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 KAZALD1Q96I82 304 aa19.05■□□□□ 0.64
TRIM28-205ENST00000595028 ANKRD2Q9GZV1 360 aa19.05■□□□□ 0.64
TRIM28-205ENST00000595028 CASP8AP2Q9UKL3 1982 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 KIF16BQ96L93 1317 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 WTIPA6NIX2 430 aaPredicted RBP19.04■□□□□ 0.64
TRIM28-205ENST00000595028 G3V3G9 751 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 CHRNDQ07001 517 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 CCDC57Q2TAC2 916 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 DCAF8Q5TAQ9 597 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 KCNQ5Q9NR82 932 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 LEMD3Q9Y2U8 911 aa19.04■□□□□ 0.64
TRIM28-205ENST00000595028 ZNF804BA4D1E1 1349 aa19.03■□□□□ 0.64
TRIM28-205ENST00000595028 TRPM7Q96QT4 1865 aa19.03■□□□□ 0.64
TRIM28-205ENST00000595028 RPS12P25398 132 aaKnown RBP19.03■□□□□ 0.64
TRIM28-205ENST00000595028 RABL6Q3YEC7 729 aaPredicted RBP19.03■□□□□ 0.64
TRIM28-205ENST00000595028 DPF2Q92785 391 aa19.03■□□□□ 0.64
TRIM28-205ENST00000595028 API5Q9BZZ5 524 aaKnown RBP19.03■□□□□ 0.64
TRIM28-205ENST00000595028 BICC1Q9H694 974 aaKnown RBP19.03■□□□□ 0.64
TRIM28-205ENST00000595028 NOB1Q9ULX3 412 aaKnown RBP19.03■□□□□ 0.64
TRIM28-205ENST00000595028 ZBTB12Q9Y330 459 aaPredicted RBP19.03■□□□□ 0.64
TRIM28-205ENST00000595028 ZBED9Q6R2W3 1325 aa19.02■□□□□ 0.64
TRIM28-205ENST00000595028 SHTN1A0MZ66 631 aa19.02■□□□□ 0.64
TRIM28-205ENST00000595028 AOC2O75106 756 aa19.02■□□□□ 0.64
TRIM28-205ENST00000595028 TAF7LQ5H9L4 462 aa19.02■□□□□ 0.64
TRIM28-205ENST00000595028 MICALL2Q8IY33 904 aa19.02■□□□□ 0.64
TRIM28-205ENST00000595028 ANKRD44Q8N8A2 993 aa19.02■□□□□ 0.64
TRIM28-205ENST00000595028 ZNF594Q96JF6 807 aaPredicted RBP19.02■□□□□ 0.64
TRIM28-205ENST00000595028 USP44Q9H0E7 712 aa19.02■□□□□ 0.64
TRIM28-205ENST00000595028 PODNQ7Z5L7 613 aa19.01■□□□□ 0.63
TRIM28-205ENST00000595028 TRPM4Q8TD43 1214 aa19.01■□□□□ 0.63
TRIM28-205ENST00000595028 CNOT7Q9UIV1 285 aaKnown RBP19.01■□□□□ 0.63
TRIM28-205ENST00000595028 VIL1P09327 827 aaKnown RBP19■□□□□ 0.63
TRIM28-205ENST00000595028 KLRK1P26718 216 aa19■□□□□ 0.63
TRIM28-205ENST00000595028 KCNJ4P48050 445 aa19■□□□□ 0.63
TRIM28-205ENST00000595028 CST9Q5W186 159 aa19■□□□□ 0.63
TRIM28-205ENST00000595028 H7C1D1 291 aa18.99■□□□□ 0.63
TRIM28-205ENST00000595028 MAP2K2P36507 400 aa18.99■□□□□ 0.63
TRIM28-205ENST00000595028 LDHAL6AQ6ZMR3 332 aa18.99■□□□□ 0.63
TRIM28-205ENST00000595028 TXNRD3Q86VQ6 643 aa18.99■□□□□ 0.63
TRIM28-205ENST00000595028 CNNM1Q9NRU3 951 aa18.99■□□□□ 0.63
TRIM28-205ENST00000595028 TLL2Q9Y6L7 1015 aa18.99■□□□□ 0.63
TRIM28-205ENST00000595028 IRS2Q9Y4H2 1338 aa18.99■□□□□ 0.63
TRIM28-205ENST00000595028 TRAF5O00463 557 aa18.98■□□□□ 0.63
TRIM28-205ENST00000595028 TAF5LO75529 589 aa18.98■□□□□ 0.63
TRIM28-205ENST00000595028 DGKZQ13574 1117 aa18.98■□□□□ 0.63
TRIM28-205ENST00000595028 RSBN1LQ6PCB5 846 aaPredicted RBP18.98■□□□□ 0.63
TRIM28-205ENST00000595028 HELBQ8NG08 1087 aaPredicted RBP18.98■□□□□ 0.63
TRIM28-205ENST00000595028 ARHGAP45Q92619 1136 aa18.98■□□□□ 0.63
TRIM28-205ENST00000595028 COA1Q9GZY4 146 aa18.98■□□□□ 0.63
TRIM28-205ENST00000595028 USP17L3A6NCW0 530 aa18.97■□□□□ 0.63
TRIM28-205ENST00000595028 USP17L4A6NCW7 530 aa18.97■□□□□ 0.63
TRIM28-205ENST00000595028 CA12O43570 354 aa18.97■□□□□ 0.63
TRIM28-205ENST00000595028 HIRAP54198 1017 aaPredicted RBP18.97■□□□□ 0.63
TRIM28-205ENST00000595028 USP17L1Q7RTZ2 530 aa18.97■□□□□ 0.63
TRIM28-205ENST00000595028 AGBL3Q8NEM8 1001 aa18.97■□□□□ 0.63
TRIM28-205ENST00000595028 SNAP23O00161 211 aa18.96■□□□□ 0.63
TRIM28-205ENST00000595028 C15orf52Q6ZUT6 534 aaKnown RBP18.96■□□□□ 0.63
TRIM28-205ENST00000595028 SAMD7Q7Z3H4 446 aa18.96■□□□□ 0.63
TRIM28-205ENST00000595028 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
TRIM28-205ENST00000595028 PGAP2Q9UHJ9 254 aa18.96■□□□□ 0.63
TRIM28-205ENST00000595028 BCAR3O75815 825 aa18.95■□□□□ 0.62
TRIM28-205ENST00000595028 UBTFL1P0CB47 393 aaPredicted RBP18.95■□□□□ 0.62
TRIM28-205ENST00000595028 TBC1D10BQ4KMP7 808 aaPredicted RBP18.95■□□□□ 0.62
TRIM28-205ENST00000595028 GMLQ99445 158 aa18.95■□□□□ 0.62
TRIM28-205ENST00000595028 PUS3Q9BZE2 481 aaKnown RBP18.95■□□□□ 0.62
TRIM28-205ENST00000595028 EGFRP00533 1210 aa18.94■□□□□ 0.62
TRIM28-205ENST00000595028 TRIM27P14373 513 aa18.94■□□□□ 0.62
TRIM28-205ENST00000595028 ZNF280AP59817 542 aaPredicted RBP18.94■□□□□ 0.62
TRIM28-205ENST00000595028 KIF4BQ2VIQ3 1234 aa18.94■□□□□ 0.62
TRIM28-205ENST00000595028 DACT2Q5SW24 774 aa18.94■□□□□ 0.62
TRIM28-205ENST00000595028 STRIP1Q5VSL9 837 aa18.94■□□□□ 0.62
TRIM28-205ENST00000595028 POLR2AP24928 1970 aaKnown RBP18.93■□□□□ 0.62
TRIM28-205ENST00000595028 IPO8O15397 1037 aaKnown RBP18.93■□□□□ 0.62
TRIM28-205ENST00000595028 PLIN1O60240 522 aa18.93■□□□□ 0.62
TRIM28-205ENST00000595028 INTS3Q68E01 1043 aaKnown RBP18.93■□□□□ 0.62
TRIM28-205ENST00000595028 ATF7IPQ6VMQ6 1270 aa18.93■□□□□ 0.62
TRIM28-205ENST00000595028 SAPCD2Q86UD0 394 aa18.93■□□□□ 0.62
TRIM28-205ENST00000595028 GLIS2Q9BZE0 524 aaPredicted RBP18.93■□□□□ 0.62
TRIM28-205ENST00000595028 RIPOR2Q9Y4F9 1068 aa18.93■□□□□ 0.62
TRIM28-205ENST00000595028 ARAP2Q8WZ64 1704 aa18.93■□□□□ 0.62
TRIM28-205ENST00000595028 MROH5Q6ZUA9 1318 aa18.93■□□□□ 0.62
TRIM28-205ENST00000595028 MYO3BQ8WXR4 1341 aa18.93■□□□□ 0.62
TRIM28-205ENST00000595028 USP17L8P0C7I0 530 aa18.92■□□□□ 0.62
TRIM28-205ENST00000595028 ZNF804AQ7Z570 1209 aa18.92■□□□□ 0.62
TRIM28-205ENST00000595028 FRAT1Q92837 279 aaPredicted RBP18.92■□□□□ 0.62
TRIM28-205ENST00000595028 FBXW7Q969H0 707 aa18.92■□□□□ 0.62
TRIM28-205ENST00000595028 MEIS3Q99687 375 aa18.92■□□□□ 0.62
TRIM28-205ENST00000595028 CD209Q9NNX6 404 aa18.92■□□□□ 0.62
TRIM28-205ENST00000595028 RFX5P48382 616 aaPredicted RBP18.91■□□□□ 0.62
TRIM28-205ENST00000595028 UBE4AQ14139 1066 aa18.91■□□□□ 0.62
TRIM28-205ENST00000595028 LRRC24Q50LG9 513 aa18.91■□□□□ 0.62
TRIM28-205ENST00000595028 RBM26Q5T8P6 1007 aaKnown RBP18.91■□□□□ 0.62
TRIM28-205ENST00000595028 KLHDC4Q8TBB5 520 aa18.91■□□□□ 0.62
TRIM28-205ENST00000595028 MXD3Q9BW11 206 aa18.91■□□□□ 0.62
TRIM28-205ENST00000595028 TNNQ9UQP3 1299 aa18.91■□□□□ 0.62
TRIM28-205ENST00000595028 LRRFIP2Q9Y608 721 aaKnown RBP18.91■□□□□ 0.62
TRIM28-205ENST00000595028 IL1R1P14778 569 aa18.9■□□□□ 0.62
TRIM28-205ENST00000595028 SOX10P56693 466 aa18.9■□□□□ 0.62
TRIM28-205ENST00000595028 CDC37L1Q7L3B6 337 aa18.9■□□□□ 0.62
TRIM28-205ENST00000595028 HDAC5Q9UQL6 1122 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms