RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 WTIPA6NIX2 430 aaPredicted RBP21.75■■□□□ 1.07
IRF3-208ENST00000594387 RABL6Q3YEC7 729 aaPredicted RBP21.75■■□□□ 1.07
IRF3-208ENST00000594387 SAMD7Q7Z3H4 446 aa21.75■■□□□ 1.07
IRF3-208ENST00000594387 ZNF804AQ7Z570 1209 aa21.75■■□□□ 1.07
IRF3-208ENST00000594387 FRAT1Q92837 279 aaPredicted RBP21.75■■□□□ 1.07
IRF3-208ENST00000594387 MYO3BQ8WXR4 1341 aa21.75■■□□□ 1.07
IRF3-208ENST00000594387 TBC1D10BQ4KMP7 808 aaPredicted RBP21.74■■□□□ 1.07
IRF3-208ENST00000594387 CDC37L1Q7L3B6 337 aa21.74■■□□□ 1.07
IRF3-208ENST00000594387 OGFOD1Q8N543 542 aa21.74■■□□□ 1.07
IRF3-208ENST00000594387 DCPSQ96C86 337 aaKnown RBP21.74■■□□□ 1.07
IRF3-208ENST00000594387 KAZALD1Q96I82 304 aa21.74■■□□□ 1.07
IRF3-208ENST00000594387 MROH5Q6ZUA9 1318 aa21.74■■□□□ 1.07
IRF3-208ENST00000594387 USP17L8P0C7I0 530 aa21.73■■□□□ 1.07
IRF3-208ENST00000594387 STRIP1Q5VSL9 837 aa21.73■■□□□ 1.07
IRF3-208ENST00000594387 TTLL5Q6EMB2 1281 aa21.73■■□□□ 1.07
IRF3-208ENST00000594387 TRPM4Q8TD43 1214 aa21.73■■□□□ 1.07
IRF3-208ENST00000594387 ABT1Q9ULW3 272 aaKnown RBP21.73■■□□□ 1.07
IRF3-208ENST00000594387 ZBED9Q6R2W3 1325 aa21.73■■□□□ 1.07
IRF3-208ENST00000594387 SHTN1A0MZ66 631 aa21.72■■□□□ 1.07
IRF3-208ENST00000594387 KIF4BQ2VIQ3 1234 aa21.72■■□□□ 1.07
IRF3-208ENST00000594387 TXNRD3Q86VQ6 643 aa21.72■■□□□ 1.07
IRF3-208ENST00000594387 PGAP2Q9UHJ9 254 aa21.72■■□□□ 1.07
IRF3-208ENST00000594387 MMP14P50281 582 aa21.71■■□□□ 1.07
IRF3-208ENST00000594387 HIRAP54198 1017 aaPredicted RBP21.71■■□□□ 1.07
IRF3-208ENST00000594387 UBE4AQ14139 1066 aa21.71■■□□□ 1.07
IRF3-208ENST00000594387 C15orf52Q6ZUT6 534 aaKnown RBP21.71■■□□□ 1.07
IRF3-208ENST00000594387 ANKRD44Q8N8A2 993 aa21.71■■□□□ 1.07
IRF3-208ENST00000594387 CD209Q9NNX6 404 aa21.71■■□□□ 1.07
IRF3-208ENST00000594387 MKRN1Q9UHC7 482 aaKnown RBP21.71■■□□□ 1.07
IRF3-208ENST00000594387 GNAI3P08754 354 aa21.7■■□□□ 1.06
IRF3-208ENST00000594387 GTF2IP78347 998 aa21.7■■□□□ 1.06
IRF3-208ENST00000594387 METTL24Q5JXM2 366 aa21.7■■□□□ 1.06
IRF3-208ENST00000594387 HDAC9Q9UKV0 1011 aa21.7■■□□□ 1.06
IRF3-208ENST00000594387 ZNF609O15014 1411 aa21.7■■□□□ 1.06
IRF3-208ENST00000594387 BCAR3O75815 825 aa21.69■■□□□ 1.06
IRF3-208ENST00000594387 KLRK1P26718 216 aa21.69■■□□□ 1.06
IRF3-208ENST00000594387 DEFB115Q30KQ5 88 aa21.69■■□□□ 1.06
IRF3-208ENST00000594387 ATF7IPQ6VMQ6 1270 aa21.69■■□□□ 1.06
IRF3-208ENST00000594387 GLIS2Q9BZE0 524 aaPredicted RBP21.69■■□□□ 1.06
IRF3-208ENST00000594387 PUS3Q9BZE2 481 aaKnown RBP21.69■■□□□ 1.06
IRF3-208ENST00000594387 DACT2Q5SW24 774 aa21.68■■□□□ 1.06
IRF3-208ENST00000594387 ZKSCAN2Q63HK3 967 aa21.68■■□□□ 1.06
IRF3-208ENST00000594387 INTS3Q68E01 1043 aaKnown RBP21.68■■□□□ 1.06
IRF3-208ENST00000594387 VPS37DQ86XT2 251 aa21.68■■□□□ 1.06
IRF3-208ENST00000594387 JMYQ8N9B5 988 aa21.68■■□□□ 1.06
IRF3-208ENST00000594387 MYOZ2Q9NPC6 264 aa21.68■■□□□ 1.06
IRF3-208ENST00000594387 RIPOR2Q9Y4F9 1068 aa21.68■■□□□ 1.06
IRF3-208ENST00000594387 SNAP23O00161 211 aa21.67■■□□□ 1.06
IRF3-208ENST00000594387 TRAF5O00463 557 aa21.67■■□□□ 1.06
IRF3-208ENST00000594387 ZNF280AP59817 542 aaPredicted RBP21.67■■□□□ 1.06
IRF3-208ENST00000594387 KRT26Q7Z3Y9 468 aa21.67■■□□□ 1.06
IRF3-208ENST00000594387 USP48Q86UV5 1035 aa21.67■■□□□ 1.06
IRF3-208ENST00000594387 SULF1Q8IWU6 871 aa21.67■■□□□ 1.06
IRF3-208ENST00000594387 GMLQ99445 158 aa21.67■■□□□ 1.06
IRF3-208ENST00000594387 ZNF408Q9H9D4 720 aa21.67■■□□□ 1.06
IRF3-208ENST00000594387 ZNF646O15015 1829 aaPredicted RBP21.66■■□□□ 1.06
IRF3-208ENST00000594387 CELF2O95319 508 aaKnown RBP21.66■■□□□ 1.06
IRF3-208ENST00000594387 CAVIN4Q5BKX8 364 aa21.66■■□□□ 1.06
IRF3-208ENST00000594387 PAXIP1Q6ZW49 1069 aaPredicted RBP21.66■■□□□ 1.06
IRF3-208ENST00000594387 CNTNAP1P78357 1384 aa21.65■■□□□ 1.06
IRF3-208ENST00000594387 MYH13Q9UKX3 1938 aa21.65■■□□□ 1.06
IRF3-208ENST00000594387 TRIM27P14373 513 aa21.65■■□□□ 1.06
IRF3-208ENST00000594387 IL1R1P14778 569 aa21.65■■□□□ 1.06
IRF3-208ENST00000594387 HIBADHP31937 336 aaKnown RBP21.65■■□□□ 1.06
IRF3-208ENST00000594387 SCARF1Q14162 830 aa21.65■■□□□ 1.06
IRF3-208ENST00000594387 LRRC24Q50LG9 513 aa21.65■■□□□ 1.06
IRF3-208ENST00000594387 CLUAP1Q96AJ1 413 aa21.65■■□□□ 1.06
IRF3-208ENST00000594387 LRRFIP2Q9Y608 721 aaKnown RBP21.65■■□□□ 1.06
IRF3-208ENST00000594387 EYA2O00167 538 aa21.64■■□□□ 1.05
IRF3-208ENST00000594387 FRAT2O75474 233 aaPredicted RBP21.64■■□□□ 1.05
IRF3-208ENST00000594387 PDE8BO95263 885 aa21.64■■□□□ 1.05
IRF3-208ENST00000594387 EGFRP00533 1210 aa21.64■■□□□ 1.05
IRF3-208ENST00000594387 KIAA0825Q8IV33 1275 aa21.64■■□□□ 1.05
IRF3-208ENST00000594387 FTSJ3Q8IY81 847 aaKnown RBP21.64■■□□□ 1.05
IRF3-208ENST00000594387 KLHDC4Q8TBB5 520 aa21.64■■□□□ 1.05
IRF3-208ENST00000594387 MXD3Q9BW11 206 aa21.64■■□□□ 1.05
IRF3-208ENST00000594387 FBXO3Q9UK99 471 aa21.64■■□□□ 1.05
IRF3-208ENST00000594387 IFIT1P09914 478 aaKnown RBP21.63■■□□□ 1.05
IRF3-208ENST00000594387 ECE1P42892 770 aa21.63■■□□□ 1.05
IRF3-208ENST00000594387 FMR1Q06787 632 aaKnown RBP eCLIP21.63■■□□□ 1.05
IRF3-208ENST00000594387 MEIS3Q99687 375 aa21.63■■□□□ 1.05
IRF3-208ENST00000594387 GGA3Q9NZ52 723 aa21.63■■□□□ 1.05
IRF3-208ENST00000594387 RASSF10A6NK89 507 aa21.62■■□□□ 1.05
IRF3-208ENST00000594387 SASH1O94885 1247 aa21.62■■□□□ 1.05
IRF3-208ENST00000594387 GYG1P46976 350 aa21.62■■□□□ 1.05
IRF3-208ENST00000594387 ANGEL2Q5VTE6 544 aaKnown RBP21.62■■□□□ 1.05
IRF3-208ENST00000594387 CST9Q5W186 159 aa21.62■■□□□ 1.05
IRF3-208ENST00000594387 ECM29Q5VYK3 1845 aa21.62■■□□□ 1.05
IRF3-208ENST00000594387 IRS2Q9Y4H2 1338 aa21.61■■□□□ 1.05
IRF3-208ENST00000594387 FKBP1AP62942 108 aaKnown RBP21.61■■□□□ 1.05
IRF3-208ENST00000594387 PUM3Q15397 648 aaKnown RBP21.61■■□□□ 1.05
IRF3-208ENST00000594387 CEP126Q9P2H0 1117 aa21.61■■□□□ 1.05
IRF3-208ENST00000594387 GNAI2P04899 355 aa21.6■■□□□ 1.05
IRF3-208ENST00000594387 SLC5A1P13866 664 aa21.6■■□□□ 1.05
IRF3-208ENST00000594387 RFX5P48382 616 aaPredicted RBP21.6■■□□□ 1.05
IRF3-208ENST00000594387 VEGFBP49765 207 aa21.6■■□□□ 1.05
IRF3-208ENST00000594387 PTPN12Q05209 780 aaKnown RBP21.6■■□□□ 1.05
IRF3-208ENST00000594387 C2orf69Q8N8R5 385 aa21.6■■□□□ 1.05
IRF3-208ENST00000594387 TDRD7Q8NHU6 1098 aaKnown RBP21.6■■□□□ 1.05
IRF3-208ENST00000594387 FAM84BQ96KN1 310 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms