RNA–Protein interactions for RNA: ENST00000594288.5

NAPA-208, Transcript of NSF attachment protein alpha, human

TSL 4

Gene NAPA, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAPA-208	ENST00000594288	GPR101	Q96P66	508 aa	Predicted RBP	11.16	□□□□□ -0.62
NAPA-208	ENST00000594288	MEIS3	Q99687	375 aa		11.16	□□□□□ -0.62
NAPA-208	ENST00000594288	GNL3L	Q9NVN8	582 aa	Known RBP	11.16	□□□□□ -0.62
NAPA-208	ENST00000594288	HDAC9	Q9UKV0	1011 aa		11.16	□□□□□ -0.62
NAPA-208	ENST00000594288	RIPOR2	Q9Y4F9	1068 aa		11.16	□□□□□ -0.62
NAPA-208	ENST00000594288	CIAO1	O76071	339 aa		11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	PDE8B	O95263	885 aa		11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	SLC5A1	P13866	664 aa		11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	HIBADH	P31937	336 aa	Known RBP	11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	EPS15	P42566	896 aa		11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	PUM3	Q15397	648 aa	Known RBP	11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	ZC3H15	Q8WU90	426 aa	Known RBP	11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	DDX19B	Q9UMR2	479 aa		11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	AKAP2	Q9Y2D5	859 aa		11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	SNED1	Q8TER0	1413 aa		11.15	□□□□□ -0.62
NAPA-208	ENST00000594288	YDJC	A8MPS7	323 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	POTEC	B2RU33	542 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	USP17L8	P0C7I0	530 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	SCNN1D	P51172	638 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	PTPN12	Q05209	780 aa	Known RBP	11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	OS9	Q13438	667 aa	Predicted RBP	11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	SLC51A	Q86UW1	340 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	MICALL2	Q8IY33	904 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	LPIN2	Q92539	896 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	PUS3	Q9BZE2	481 aa	Known RBP	11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	CD209	Q9NNX6	404 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	COPRS	Q9NQ92	184 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	FER1L6	Q2WGJ9	1857 aa		11.14	□□□□□ -0.63
NAPA-208	ENST00000594288	HMMR	O75330	724 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	SASH1	O94885	1247 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	GTF2I	P78347	998 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	MTX1	Q13505	466 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	PDE3A	Q14432	1141 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	LRRC24	Q50LG9	513 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	GORAB	Q5T7V8	394 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	RBM26	Q5T8P6	1007 aa	Known RBP	11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	CNTROB	Q8N137	903 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	DCPS	Q96C86	337 aa	Known RBP	11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	SIL1	Q9H173	461 aa		11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.13	□□□□□ -0.63
NAPA-208	ENST00000594288	ZBTB7B	O15156	539 aa	Predicted RBP	11.12	□□□□□ -0.63
NAPA-208	ENST00000594288	ATP8B2	P98198	1209 aa		11.12	□□□□□ -0.63
NAPA-208	ENST00000594288	HSP90AB4P	Q58FF6	505 aa		11.12	□□□□□ -0.63
NAPA-208	ENST00000594288	TBC1D22A	Q8WUA7	517 aa		11.12	□□□□□ -0.63
NAPA-208	ENST00000594288	KCNQ5	Q9NR82	932 aa		11.12	□□□□□ -0.63
NAPA-208	ENST00000594288	SBF1	O95248	1867 aa		11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	IL1R1	P14778	569 aa		11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	MVP	Q14764	893 aa	Known RBP	11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	ATP2B3	Q16720	1220 aa		11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	CDC37L1	Q7L3B6	337 aa		11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	TXNRD3	Q86VQ6	643 aa		11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	KLHDC4	Q8TBB5	520 aa		11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	PANK1	Q8TE04	598 aa		11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	DDX60	Q8IY21	1712 aa	Known RBP	11.11	□□□□□ -0.63
NAPA-208	ENST00000594288	WTIP	A6NIX2	430 aa	Predicted RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	MYO1B	O43795	1136 aa		11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	SURF6	O75683	361 aa	Known RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	RFX5	P48382	616 aa	Predicted RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	FKBP1A	P62942	108 aa	Known RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	KIF4B	Q2VIQ3	1234 aa		11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	DACT2	Q5SW24	774 aa		11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	MAP1S	Q66K74	1059 aa	Predicted RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	FBXO33	Q7Z6M2	555 aa		11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	SULF1	Q8IWU6	871 aa		11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	FAM84B	Q96KN1	310 aa	Predicted RBP	11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	MYOZ2	Q9NPC6	264 aa		11.1	□□□□□ -0.63
NAPA-208	ENST00000594288	SNAP23	O00161	211 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	GYG1	P46976	350 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	RBM5	P52756	815 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	ZNF280A	P59817	542 aa	Predicted RBP	11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	DLGAP5	Q15398	846 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	SAMD7	Q7Z3H4	446 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	ERC1	Q8IUD2	1116 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	TDRD7	Q8NHU6	1098 aa	Known RBP	11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	WDR66	Q8TBY9	1149 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	NEUROD6	Q96NK8	337 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	PA2G4	Q9UQ80	394 aa	Known RBP	11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	TNN	Q9UQP3	1299 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	COG6	Q9Y2V7	657 aa		11.09	□□□□□ -0.63
NAPA-208	ENST00000594288	TMEM88B	A6NKF7	163 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	SEMA3E	O15041	775 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	RLBP1	P12271	317 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	BCAM	P50895	628 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	SCARF1	Q14162	830 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	ATG9A	Q7Z3C6	839 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	KRT26	Q7Z3Y9	468 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	KIAA0825	Q8IV33	1275 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	ZGPAT	Q8N5A5	531 aa	Known RBP	11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	SSH3	Q8TE77	659 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	GML	Q99445	158 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	PGAP2	Q9UHJ9	254 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	SUGT1	Q9Y2Z0	365 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	CACNA1S	Q13698	1873 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	LAMB2	P55268	1798 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	FAM205A	Q6ZU69	1335 aa		11.08	□□□□□ -0.64
NAPA-208	ENST00000594288	WDR90	Q96KV7	1748 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms