RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 PITPNM2Q9BZ72 1349 aa20.41■□□□□ 0.86
GTF2F1-203ENST00000594213 CCDC85CA6NKD9 419 aa20.4■□□□□ 0.86
GTF2F1-203ENST00000594213 POLR2AP24928 1970 aaKnown RBP20.4■□□□□ 0.86
GTF2F1-203ENST00000594213 GCKRQ14397 625 aa20.4■□□□□ 0.86
GTF2F1-203ENST00000594213 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
GTF2F1-203ENST00000594213 TXNRD3Q86VQ6 643 aa20.4■□□□□ 0.86
GTF2F1-203ENST00000594213 SAGE1Q9NXZ1 904 aa20.4■□□□□ 0.86
GTF2F1-203ENST00000594213 CSF1RP07333 972 aa20.39■□□□□ 0.85
GTF2F1-203ENST00000594213 CSRNP1Q96S65 589 aa20.39■□□□□ 0.85
GTF2F1-203ENST00000594213 FKBP1BP68106 108 aa20.38■□□□□ 0.85
GTF2F1-203ENST00000594213 FLIIQ13045 1269 aa20.38■□□□□ 0.85
GTF2F1-203ENST00000594213 STRIP1Q5VSL9 837 aa20.38■□□□□ 0.85
GTF2F1-203ENST00000594213 MXD3Q9BW11 206 aa20.38■□□□□ 0.85
GTF2F1-203ENST00000594213 COA1Q9GZY4 146 aa20.38■□□□□ 0.85
GTF2F1-203ENST00000594213 RNF186Q9NXI6 227 aa20.38■□□□□ 0.85
GTF2F1-203ENST00000594213 LEMD3Q9Y2U8 911 aa20.38■□□□□ 0.85
GTF2F1-203ENST00000594213 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
GTF2F1-203ENST00000594213 NBPF9Q3BBW0 867 aa20.37■□□□□ 0.85
GTF2F1-203ENST00000594213 VAMP4O75379 141 aa20.36■□□□□ 0.85
GTF2F1-203ENST00000594213 ITGA6P23229 1130 aa20.36■□□□□ 0.85
GTF2F1-203ENST00000594213 DGKZQ13574 1117 aa20.36■□□□□ 0.85
GTF2F1-203ENST00000594213 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
GTF2F1-203ENST00000594213 LINS1Q8NG48 757 aa20.36■□□□□ 0.85
GTF2F1-203ENST00000594213 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
GTF2F1-203ENST00000594213 CASP8AP2Q9UKL3 1982 aa20.35■□□□□ 0.85
GTF2F1-203ENST00000594213 TRPA1O75762 1119 aa20.35■□□□□ 0.85
GTF2F1-203ENST00000594213 KLRK1P26718 216 aa20.35■□□□□ 0.85
GTF2F1-203ENST00000594213 IGHMBP2P38935 993 aaKnown RBP20.35■□□□□ 0.85
GTF2F1-203ENST00000594213 SCAF8Q9UPN6 1271 aaKnown RBP20.35■□□□□ 0.85
GTF2F1-203ENST00000594213 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
GTF2F1-203ENST00000594213 FANCIQ9NVI1 1328 aa20.34■□□□□ 0.85
GTF2F1-203ENST00000594213 WNT10BO00744 389 aa20.34■□□□□ 0.85
GTF2F1-203ENST00000594213 MMP14P50281 582 aa20.34■□□□□ 0.85
GTF2F1-203ENST00000594213 MOB2Q70IA6 237 aa20.34■□□□□ 0.85
GTF2F1-203ENST00000594213 ANKRD2Q9GZV1 360 aa20.34■□□□□ 0.85
GTF2F1-203ENST00000594213 MYO3BQ8WXR4 1341 aa20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 IRS2Q9Y4H2 1338 aa20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 PSME4Q14997 1843 aa20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 PRAMEF18Q5VWM3 479 aa20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 WDR63Q8IWG1 891 aa20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 REM2Q8IYK8 340 aaPredicted RBP20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 ZBED3Q96IU2 234 aaPredicted RBP20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
GTF2F1-203ENST00000594213 MLLT1Q03111 559 aaPredicted RBP20.32■□□□□ 0.84
GTF2F1-203ENST00000594213 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
GTF2F1-203ENST00000594213 TTLL5Q6EMB2 1281 aa20.32■□□□□ 0.84
GTF2F1-203ENST00000594213 OGFOD1Q8N543 542 aa20.32■□□□□ 0.84
GTF2F1-203ENST00000594213 UBE2Q2LH0YL09 131 aa20.31■□□□□ 0.84
GTF2F1-203ENST00000594213 FOXO4P98177 505 aa20.31■□□□□ 0.84
GTF2F1-203ENST00000594213 CHRNDQ07001 517 aa20.31■□□□□ 0.84
GTF2F1-203ENST00000594213 MPHOSPH8Q99549 860 aa20.31■□□□□ 0.84
GTF2F1-203ENST00000594213 BEND3Q5T5X7 828 aa20.3■□□□□ 0.84
GTF2F1-203ENST00000594213 C15orf52Q6ZUT6 534 aaKnown RBP20.3■□□□□ 0.84
GTF2F1-203ENST00000594213 SNAP23O00161 211 aa20.29■□□□□ 0.84
GTF2F1-203ENST00000594213 EXOSC9Q06265 439 aaKnown RBP20.29■□□□□ 0.84
GTF2F1-203ENST00000594213 FBXW7Q969H0 707 aa20.29■□□□□ 0.84
GTF2F1-203ENST00000594213 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
GTF2F1-203ENST00000594213 CD209Q9NNX6 404 aa20.29■□□□□ 0.84
GTF2F1-203ENST00000594213 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
GTF2F1-203ENST00000594213 PAPPA2Q9BXP8 1791 aa20.29■□□□□ 0.84
GTF2F1-203ENST00000594213 SASH1O94885 1247 aa20.28■□□□□ 0.84
GTF2F1-203ENST00000594213 GTF2IP78347 998 aa20.28■□□□□ 0.84
GTF2F1-203ENST00000594213 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
GTF2F1-203ENST00000594213 F6X3S4 739 aa20.27■□□□□ 0.84
GTF2F1-203ENST00000594213 KIAA0825Q8IV33 1275 aa20.27■□□□□ 0.84
GTF2F1-203ENST00000594213 CERS5Q8N5B7 392 aa20.27■□□□□ 0.84
GTF2F1-203ENST00000594213 ZNF646O15015 1829 aaPredicted RBP20.27■□□□□ 0.84
GTF2F1-203ENST00000594213 TM4SF4P48230 202 aa20.26■□□□□ 0.83
GTF2F1-203ENST00000594213 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
GTF2F1-203ENST00000594213 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
GTF2F1-203ENST00000594213 MYH3P11055 1940 aa20.25■□□□□ 0.83
GTF2F1-203ENST00000594213 TAF5LO75529 589 aa20.25■□□□□ 0.83
GTF2F1-203ENST00000594213 IFIT5Q13325 482 aaKnown RBP20.25■□□□□ 0.83
GTF2F1-203ENST00000594213 LDLRAD1Q5T700 205 aa20.25■□□□□ 0.83
GTF2F1-203ENST00000594213 MTMR14Q8NCE2 650 aa20.25■□□□□ 0.83
GTF2F1-203ENST00000594213 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
GTF2F1-203ENST00000594213 HDAC9Q9UKV0 1011 aa20.25■□□□□ 0.83
GTF2F1-203ENST00000594213 IL1R1P14778 569 aa20.24■□□□□ 0.83
GTF2F1-203ENST00000594213 KCNJ4P48050 445 aa20.24■□□□□ 0.83
GTF2F1-203ENST00000594213 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
GTF2F1-203ENST00000594213 CTU1Q7Z7A3 348 aaKnown RBP20.24■□□□□ 0.83
GTF2F1-203ENST00000594213 APOBEC3FQ8IUX4 373 aaKnown RBP20.24■□□□□ 0.83
GTF2F1-203ENST00000594213 NF2P35240 595 aa20.23■□□□□ 0.83
GTF2F1-203ENST00000594213 TTLL12Q14166 644 aaPredicted RBP20.23■□□□□ 0.83
GTF2F1-203ENST00000594213 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
GTF2F1-203ENST00000594213 FKBP1AP62942 108 aaKnown RBP20.22■□□□□ 0.83
GTF2F1-203ENST00000594213 NOM1Q5C9Z4 860 aaKnown RBP20.22■□□□□ 0.83
GTF2F1-203ENST00000594213 GRM8O00222 908 aa20.21■□□□□ 0.83
GTF2F1-203ENST00000594213 TBC1D8O95759 1140 aa20.21■□□□□ 0.83
GTF2F1-203ENST00000594213 DLGAP5Q15398 846 aa20.21■□□□□ 0.83
GTF2F1-203ENST00000594213 ARMC9Q7Z3E5 817 aa20.21■□□□□ 0.83
GTF2F1-203ENST00000594213 DEFB129Q9H1M3 183 aa20.21■□□□□ 0.83
GTF2F1-203ENST00000594213 PCDHAC2Q9Y5I4 1007 aa20.21■□□□□ 0.83
GTF2F1-203ENST00000594213 ANP32CO43423 234 aa20.2■□□□□ 0.82
GTF2F1-203ENST00000594213 MAP3K11Q16584 847 aa20.2■□□□□ 0.82
GTF2F1-203ENST00000594213 ZNF296Q8WUU4 475 aaPredicted RBP20.2■□□□□ 0.82
GTF2F1-203ENST00000594213 ZNF594Q96JF6 807 aaPredicted RBP20.2■□□□□ 0.82
GTF2F1-203ENST00000594213 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
GTF2F1-203ENST00000594213 SPEF2Q9C093 1822 aa20.2■□□□□ 0.82
GTF2F1-203ENST00000594213 ALDH1L1O75891 902 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms