RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GREM2Q9H772 168 aa18.9■□□□□ 0.62
PNKP-202ENST00000593706 IGKV5-2P06315 115 aa18.89■□□□□ 0.61
PNKP-202ENST00000593706 CWF19L2Q2TBE0 894 aaKnown RBP18.89■□□□□ 0.61
PNKP-202ENST00000593706 TTLL11Q8NHH1 800 aa18.89■□□□□ 0.61
PNKP-202ENST00000593706 PITPNM2Q9BZ72 1349 aa18.89■□□□□ 0.61
PNKP-202ENST00000593706 TRPA1O75762 1119 aa18.88■□□□□ 0.61
PNKP-202ENST00000593706 UBE3BQ7Z3V4 1068 aa18.88■□□□□ 0.61
PNKP-202ENST00000593706 MRS2Q9HD23 443 aa18.88■□□□□ 0.61
PNKP-202ENST00000593706 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
PNKP-202ENST00000593706 TWISTNBQ3B726 338 aaPredicted RBP18.87■□□□□ 0.61
PNKP-202ENST00000593706 GMLQ99445 158 aa18.87■□□□□ 0.61
PNKP-202ENST00000593706 MINPP1Q9UNW1 487 aa18.87■□□□□ 0.61
PNKP-202ENST00000593706 NEURL1BA8MQ27 555 aa18.86■□□□□ 0.61
PNKP-202ENST00000593706 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
PNKP-202ENST00000593706 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
PNKP-202ENST00000593706 FKBP1BP68106 108 aa18.86■□□□□ 0.61
PNKP-202ENST00000593706 RASAL3Q86YV0 1011 aa18.86■□□□□ 0.61
PNKP-202ENST00000593706 OGFOD1Q8N543 542 aa18.86■□□□□ 0.61
PNKP-202ENST00000593706 RNF186Q9NXI6 227 aa18.86■□□□□ 0.61
PNKP-202ENST00000593706 MYO3BQ8WXR4 1341 aa18.85■□□□□ 0.61
PNKP-202ENST00000593706 WTIPA6NIX2 430 aaPredicted RBP18.85■□□□□ 0.61
PNKP-202ENST00000593706 RGS19P49795 217 aa18.85■□□□□ 0.61
PNKP-202ENST00000593706 CCDC27Q2M243 656 aa18.85■□□□□ 0.61
PNKP-202ENST00000593706 SCAF8Q9UPN6 1271 aaKnown RBP18.85■□□□□ 0.61
PNKP-202ENST00000593706 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
PNKP-202ENST00000593706 TTLL12Q14166 644 aaPredicted RBP18.84■□□□□ 0.61
PNKP-202ENST00000593706 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
PNKP-202ENST00000593706 G2E3Q7L622 706 aa18.84■□□□□ 0.61
PNKP-202ENST00000593706 CSRNP1Q96S65 589 aa18.84■□□□□ 0.61
PNKP-202ENST00000593706 MXD3Q9BW11 206 aa18.84■□□□□ 0.61
PNKP-202ENST00000593706 LAMB1P07942 1786 aa18.83■□□□□ 0.61
PNKP-202ENST00000593706 NBPF9Q3BBW0 867 aa18.83■□□□□ 0.6
PNKP-202ENST00000593706 DACT2Q5SW24 774 aa18.83■□□□□ 0.6
PNKP-202ENST00000593706 WWC1Q8IX03 1113 aa18.83■□□□□ 0.6
PNKP-202ENST00000593706 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.6
PNKP-202ENST00000593706 COA1Q9GZY4 146 aa18.83■□□□□ 0.6
PNKP-202ENST00000593706 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
PNKP-202ENST00000593706 ITGA6P23229 1130 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 NF2P35240 595 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 KCNJ4P48050 445 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 FLIIQ13045 1269 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 FKBP5Q13451 457 aaPredicted RBP18.82■□□□□ 0.6
PNKP-202ENST00000593706 STRIP1Q5VSL9 837 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 MOB2Q70IA6 237 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 MPHOSPH8Q99549 860 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 ARAP2Q8WZ64 1704 aa18.82■□□□□ 0.6
PNKP-202ENST00000593706 ZNF804BA4D1E1 1349 aa18.81■□□□□ 0.6
PNKP-202ENST00000593706 H7C1W4 665 aa18.81■□□□□ 0.6
PNKP-202ENST00000593706 SASH1O94885 1247 aa18.81■□□□□ 0.6
PNKP-202ENST00000593706 GCKRQ14397 625 aa18.81■□□□□ 0.6
PNKP-202ENST00000593706 ANKRD2Q9GZV1 360 aa18.81■□□□□ 0.6
PNKP-202ENST00000593706 IL16Q14005 1332 aa18.8■□□□□ 0.6
PNKP-202ENST00000593706 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
PNKP-202ENST00000593706 TXNRD3Q86VQ6 643 aa18.8■□□□□ 0.6
PNKP-202ENST00000593706 UBE2Q2LH0YL09 131 aa18.79■□□□□ 0.6
PNKP-202ENST00000593706 WNT10BO00744 389 aa18.79■□□□□ 0.6
PNKP-202ENST00000593706 TTLL5Q6EMB2 1281 aa18.79■□□□□ 0.6
PNKP-202ENST00000593706 KIAA0825Q8IV33 1275 aa18.79■□□□□ 0.6
PNKP-202ENST00000593706 DNAAF4Q8WXU2 420 aa18.79■□□□□ 0.6
PNKP-202ENST00000593706 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
PNKP-202ENST00000593706 HDAC9Q9UKV0 1011 aa18.79■□□□□ 0.6
PNKP-202ENST00000593706 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
PNKP-202ENST00000593706 KLRK1P26718 216 aa18.78■□□□□ 0.6
PNKP-202ENST00000593706 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
PNKP-202ENST00000593706 APOBEC3FQ8IUX4 373 aaKnown RBP18.78■□□□□ 0.6
PNKP-202ENST00000593706 OTOFQ9HC10 1997 aa18.78■□□□□ 0.6
PNKP-202ENST00000593706 CENPFP49454 3210 aa18.77■□□□□ 0.6
PNKP-202ENST00000593706 MMP14P50281 582 aa18.77■□□□□ 0.6
PNKP-202ENST00000593706 SOX10P56693 466 aa18.77■□□□□ 0.6
PNKP-202ENST00000593706 GTF2IP78347 998 aa18.77■□□□□ 0.6
PNKP-202ENST00000593706 CHRNDQ07001 517 aa18.77■□□□□ 0.6
PNKP-202ENST00000593706 LINS1Q8NG48 757 aa18.77■□□□□ 0.6
PNKP-202ENST00000593706 CHMP3Q9Y3E7 222 aa18.77■□□□□ 0.6
PNKP-202ENST00000593706 COL1A1P02452 1464 aaPredicted RBP18.77■□□□□ 0.59
PNKP-202ENST00000593706 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
PNKP-202ENST00000593706 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
PNKP-202ENST00000593706 MKRN3Q13064 507 aaKnown RBP18.76■□□□□ 0.59
PNKP-202ENST00000593706 CSF1RP07333 972 aa18.75■□□□□ 0.59
PNKP-202ENST00000593706 CASP7P55210 303 aa18.75■□□□□ 0.59
PNKP-202ENST00000593706 PRKG1Q13976 671 aa18.75■□□□□ 0.59
PNKP-202ENST00000593706 ARMC9Q7Z3E5 817 aa18.74■□□□□ 0.59
PNKP-202ENST00000593706 SALL2Q9Y467 1007 aaPredicted RBP18.74■□□□□ 0.59
PNKP-202ENST00000593706 HTTP42858 3142 aa18.73■□□□□ 0.59
PNKP-202ENST00000593706 TBC1D8O95759 1140 aa18.73■□□□□ 0.59
PNKP-202ENST00000593706 SREBF2Q12772 1141 aa18.73■□□□□ 0.59
PNKP-202ENST00000593706 IFIT5Q13325 482 aaKnown RBP18.73■□□□□ 0.59
PNKP-202ENST00000593706 TAF5LO75529 589 aa18.72■□□□□ 0.59
PNKP-202ENST00000593706 SLC34A2O95436 690 aa18.72■□□□□ 0.59
PNKP-202ENST00000593706 DLGAP5Q15398 846 aa18.72■□□□□ 0.59
PNKP-202ENST00000593706 ZNF804AQ7Z570 1209 aa18.72■□□□□ 0.59
PNKP-202ENST00000593706 HELBQ8NG08 1087 aaPredicted RBP18.72■□□□□ 0.59
PNKP-202ENST00000593706 ZNF296Q8WUU4 475 aaPredicted RBP18.72■□□□□ 0.59
PNKP-202ENST00000593706 CD209Q9NNX6 404 aa18.72■□□□□ 0.59
PNKP-202ENST00000593706 ANGEL1Q9UNK9 670 aaKnown RBP18.72■□□□□ 0.59
PNKP-202ENST00000593706 F6X3S4 739 aa18.71■□□□□ 0.59
PNKP-202ENST00000593706 SNAP23O00161 211 aa18.71■□□□□ 0.59
PNKP-202ENST00000593706 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
PNKP-202ENST00000593706 EXOSC9Q06265 439 aaKnown RBP18.71■□□□□ 0.59
PNKP-202ENST00000593706 TAF7LQ5H9L4 462 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms