RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 PANK2Q9BZ23 570 aa17.61■□□□□ 0.41
SYMPK-202ENST00000593504 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
SYMPK-202ENST00000593504 ZNF165P49910 485 aa17.61■□□□□ 0.41
SYMPK-202ENST00000593504 GSTO1P78417 241 aa17.61■□□□□ 0.41
SYMPK-202ENST00000593504 UVSSAQ2YD98 709 aa17.61■□□□□ 0.41
SYMPK-202ENST00000593504 GNAT2P19087 354 aa17.6■□□□□ 0.41
SYMPK-202ENST00000593504 RTN1Q16799 776 aa17.6■□□□□ 0.41
SYMPK-202ENST00000593504 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
SYMPK-202ENST00000593504 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
SYMPK-202ENST00000593504 TCIRG1Q13488 830 aa17.6■□□□□ 0.41
SYMPK-202ENST00000593504 CLIP2Q9UDT6 1046 aa17.6■□□□□ 0.41
SYMPK-202ENST00000593504 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
SYMPK-202ENST00000593504 CCDC87Q9NVE4 849 aa17.6■□□□□ 0.41
SYMPK-202ENST00000593504 ZNHIT6Q9NWK9 470 aaKnown RBP17.6■□□□□ 0.41
SYMPK-202ENST00000593504 LRRC7Q96NW7 1537 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 RRP9O43818 475 aaKnown RBP17.59■□□□□ 0.41
SYMPK-202ENST00000593504 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
SYMPK-202ENST00000593504 KIAA1210Q9ULL0 1709 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 PIK3C2BO00750 1634 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 ATP5JP18859 108 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 PUM3Q15397 648 aaKnown RBP17.59■□□□□ 0.41
SYMPK-202ENST00000593504 KLHL10Q6JEL2 608 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 CCDC112Q8NEF3 446 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 BMP2KQ9NSY1 1161 aaPredicted RBP17.59■□□□□ 0.41
SYMPK-202ENST00000593504 DACT1Q9NYF0 836 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 IFIT1BQ5T764 474 aaKnown RBP17.59■□□□□ 0.41
SYMPK-202ENST00000593504 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
SYMPK-202ENST00000593504 GNPATO15228 680 aa17.58■□□□□ 0.41
SYMPK-202ENST00000593504 EPB41L2O43491 1005 aaKnown RBP17.58■□□□□ 0.41
SYMPK-202ENST00000593504 EDC3Q96F86 508 aaKnown RBP17.58■□□□□ 0.41
SYMPK-202ENST00000593504 ERBB4Q15303 1308 aa17.58■□□□□ 0.4
SYMPK-202ENST00000593504 KCNG4Q8TDN1 519 aa17.58■□□□□ 0.4
SYMPK-202ENST00000593504 MBD4O95243 580 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 SFPQP23246 707 aaKnown RBP eCLIP17.57■□□□□ 0.4
SYMPK-202ENST00000593504 RBM10P98175 930 aaKnown RBP17.57■□□□□ 0.4
SYMPK-202ENST00000593504 FAM177A1Q8N128 213 aaPredicted RBP17.57■□□□□ 0.4
SYMPK-202ENST00000593504 STAP2Q9UGK3 403 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 UQCRHLA0A096LP55 91 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 UQCRHP07919 91 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 ZNF76P36508 570 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 APPBP2Q92624 585 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 TANGO6Q9C0B7 1094 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 NRXN1Q9ULB1 1477 aa17.57■□□□□ 0.4
SYMPK-202ENST00000593504 ZNF622Q969S3 477 aaKnown RBP eCLIP17.56■□□□□ 0.48e-7■□□□□ 10.5
SYMPK-202ENST00000593504 STX8Q9UNK0 236 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 SSH2Q76I76 1423 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 OSBPL3Q9H4L5 887 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 ZC3H13Q5T200 1668 aaKnown RBP17.56■□□□□ 0.4
SYMPK-202ENST00000593504 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 DLC1Q96QB1 1528 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 CAGE1Q8TC20 777 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 MRPS27Q92552 414 aaKnown RBP17.56■□□□□ 0.4
SYMPK-202ENST00000593504 CARD10Q9BWT7 1032 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 PALD1Q9ULE6 856 aa17.56■□□□□ 0.4
SYMPK-202ENST00000593504 CAVIN2O95810 425 aa17.55■□□□□ 0.4
SYMPK-202ENST00000593504 CCDC102BQ68D86 513 aa17.55■□□□□ 0.4
SYMPK-202ENST00000593504 ZNF804AQ7Z570 1209 aa17.55■□□□□ 0.4
SYMPK-202ENST00000593504 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
SYMPK-202ENST00000593504 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
SYMPK-202ENST00000593504 FAM98CQ17RN3 349 aaKnown RBP17.55■□□□□ 0.4
SYMPK-202ENST00000593504 ISM2Q6H9L7 571 aa17.55■□□□□ 0.4
SYMPK-202ENST00000593504 SYKP43405 635 aa17.55■□□□□ 0.4
SYMPK-202ENST00000593504 TSPY3P0CV98 308 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 TSPY8P0CW00 308 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 RXRAP19793 462 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 AGLP35573 1532 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 GPAA1O43292 621 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 TAF5LO75529 589 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 ANO6Q4KMQ2 910 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SYMPK-202ENST00000593504 ZAP70P43403 619 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 PTH1RQ03431 593 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
SYMPK-202ENST00000593504 ADGRL3Q9HAR2 1447 aa17.54■□□□□ 0.4
SYMPK-202ENST00000593504 MARCKSP29966 332 aaPredicted RBP17.53■□□□□ 0.4
SYMPK-202ENST00000593504 TEX35Q5T0J7 233 aa17.53■□□□□ 0.4
SYMPK-202ENST00000593504 LPIN2Q92539 896 aa17.53■□□□□ 0.4
SYMPK-202ENST00000593504 A0A0D9SFI3 127 aa17.53■□□□□ 0.4
SYMPK-202ENST00000593504 UNC5CLQ8IV45 518 aa17.53■□□□□ 0.4
SYMPK-202ENST00000593504 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
SYMPK-202ENST00000593504 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 FAM200AQ8TCP9 573 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 JAG2Q9Y219 1238 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 USP31Q70CQ4 1352 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 TOP1P11387 765 aaKnown RBP17.52■□□□□ 0.4
SYMPK-202ENST00000593504 UBE2Q2Q8WVN8 375 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 SPTLC2O15270 562 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 DTNBO60941 627 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 DEF6Q9H4E7 631 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 ARMT1Q9H993 441 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
SYMPK-202ENST00000593504 HLA-DOAP06340 250 aa17.52■□□□□ 0.39
SYMPK-202ENST00000593504 B4E1Z4 1266 aa17.51■□□□□ 0.39
SYMPK-202ENST00000593504 EIF5P55010 431 aaKnown RBP17.51■□□□□ 0.39
SYMPK-202ENST00000593504 CTSWP56202 376 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms