RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 NSFL1CQ9UNZ2 370 aaKnown RBP16.89■□□□□ 0.29
H3F3B-213ENST00000593254 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
H3F3B-213ENST00000593254 RIMBP2O15034 1052 aa16.88■□□□□ 0.29
H3F3B-213ENST00000593254 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
H3F3B-213ENST00000593254 CWF19L2Q2TBE0 894 aaKnown RBP16.88■□□□□ 0.29
H3F3B-213ENST00000593254 KIF4BQ2VIQ3 1234 aa16.88■□□□□ 0.29
H3F3B-213ENST00000593254 SULF1Q8IWU6 871 aa16.88■□□□□ 0.29
H3F3B-213ENST00000593254 CDCA5Q96FF9 252 aa16.88■□□□□ 0.29
H3F3B-213ENST00000593254 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
H3F3B-213ENST00000593254 ASTN2O75129 1339 aaPredicted RBP16.88■□□□□ 0.29
H3F3B-213ENST00000593254 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
H3F3B-213ENST00000593254 PSME4Q14997 1843 aa16.87■□□□□ 0.29
H3F3B-213ENST00000593254 GPSM2P81274 684 aa16.87■□□□□ 0.29
H3F3B-213ENST00000593254 FKBP5Q13451 457 aaPredicted RBP16.87■□□□□ 0.29
H3F3B-213ENST00000593254 PKN2Q16513 984 aaKnown RBP16.87■□□□□ 0.29
H3F3B-213ENST00000593254 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
H3F3B-213ENST00000593254 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
H3F3B-213ENST00000593254 ZNF609O15014 1411 aa16.87■□□□□ 0.29
H3F3B-213ENST00000593254 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
H3F3B-213ENST00000593254 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
H3F3B-213ENST00000593254 CTSWP56202 376 aa16.86■□□□□ 0.29
H3F3B-213ENST00000593254 FKBP1BP68106 108 aa16.86■□□□□ 0.29
H3F3B-213ENST00000593254 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
H3F3B-213ENST00000593254 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
H3F3B-213ENST00000593254 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
H3F3B-213ENST00000593254 H7C1W4 665 aa16.85■□□□□ 0.29
H3F3B-213ENST00000593254 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
H3F3B-213ENST00000593254 TBC1D16Q8TBP0 767 aa16.85■□□□□ 0.29
H3F3B-213ENST00000593254 CCDC85AQ96PX6 553 aaPredicted RBP16.85■□□□□ 0.29
H3F3B-213ENST00000593254 EYA3Q99504 573 aa16.85■□□□□ 0.29
H3F3B-213ENST00000593254 GCKRQ14397 625 aa16.84■□□□□ 0.29
H3F3B-213ENST00000593254 UBE3BQ7Z3V4 1068 aa16.84■□□□□ 0.29
H3F3B-213ENST00000593254 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
H3F3B-213ENST00000593254 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
H3F3B-213ENST00000593254 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
H3F3B-213ENST00000593254 SCARF1Q14162 830 aa16.83■□□□□ 0.28
H3F3B-213ENST00000593254 ANGEL2Q5VTE6 544 aaKnown RBP16.83■□□□□ 0.28
H3F3B-213ENST00000593254 ANKRD18AQ8IVF6 992 aa16.83■□□□□ 0.28
H3F3B-213ENST00000593254 CASP7P55210 303 aa16.82■□□□□ 0.28
H3F3B-213ENST00000593254 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
H3F3B-213ENST00000593254 AGBL3Q8NEM8 1001 aa16.82■□□□□ 0.28
H3F3B-213ENST00000593254 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
H3F3B-213ENST00000593254 PLA2G12BQ9BX93 195 aa16.82■□□□□ 0.28
H3F3B-213ENST00000593254 GREM2Q9H772 168 aa16.82■□□□□ 0.28
H3F3B-213ENST00000593254 ANKIB1Q9P2G1 1089 aa16.82■□□□□ 0.28
H3F3B-213ENST00000593254 XDHP47989 1333 aa16.81■□□□□ 0.28
H3F3B-213ENST00000593254 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
H3F3B-213ENST00000593254 UFL1O94874 794 aa16.81■□□□□ 0.28
H3F3B-213ENST00000593254 GMLQ99445 158 aa16.81■□□□□ 0.28
H3F3B-213ENST00000593254 ZC3H12CQ9C0D7 883 aaKnown RBP16.81■□□□□ 0.28
H3F3B-213ENST00000593254 GGA1Q9UJY5 639 aa16.81■□□□□ 0.28
H3F3B-213ENST00000593254 HDAC9Q9UKV0 1011 aa16.81■□□□□ 0.28
H3F3B-213ENST00000593254 TBC1D8O95759 1140 aa16.8■□□□□ 0.28
H3F3B-213ENST00000593254 TM4SF4P48230 202 aa16.8■□□□□ 0.28
H3F3B-213ENST00000593254 RSBN1LQ6PCB5 846 aaPredicted RBP16.8■□□□□ 0.28
H3F3B-213ENST00000593254 BSDC1Q9NW68 430 aaPredicted RBP16.8■□□□□ 0.28
H3F3B-213ENST00000593254 F6X3S4 739 aa16.79■□□□□ 0.28
H3F3B-213ENST00000593254 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
H3F3B-213ENST00000593254 FBXO46Q6PJ61 603 aaPredicted RBP16.79■□□□□ 0.28
H3F3B-213ENST00000593254 MOB2Q70IA6 237 aa16.79■□□□□ 0.28
H3F3B-213ENST00000593254 KIAA0100Q14667 2235 aaKnown RBP16.79■□□□□ 0.28
H3F3B-213ENST00000593254 SZT2Q5T011 3432 aa16.79■□□□□ 0.28
H3F3B-213ENST00000593254 GPR25O00155 361 aa16.78■□□□□ 0.28
H3F3B-213ENST00000593254 CSF1RP07333 972 aa16.78■□□□□ 0.28
H3F3B-213ENST00000593254 GCC1Q96CN9 775 aa16.78■□□□□ 0.28
H3F3B-213ENST00000593254 CFHR5Q9BXR6 569 aa16.78■□□□□ 0.28
H3F3B-213ENST00000593254 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
H3F3B-213ENST00000593254 UBE2Q2LH0YL09 131 aa16.77■□□□□ 0.28
H3F3B-213ENST00000593254 ATP2B4P23634 1241 aa16.77■□□□□ 0.28
H3F3B-213ENST00000593254 MINPP1Q9UNW1 487 aa16.77■□□□□ 0.28
H3F3B-213ENST00000593254 ZNF646O15015 1829 aaPredicted RBP16.77■□□□□ 0.27
H3F3B-213ENST00000593254 E9PSI1 815 aa16.76■□□□□ 0.27
H3F3B-213ENST00000593254 USP17L8P0C7I0 530 aa16.76■□□□□ 0.27
H3F3B-213ENST00000593254 ITGA6P23229 1130 aa16.76■□□□□ 0.27
H3F3B-213ENST00000593254 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
H3F3B-213ENST00000593254 A0A1B0GUL6 1792 aa16.76■□□□□ 0.27
H3F3B-213ENST00000593254 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
H3F3B-213ENST00000593254 IGHMBP2P38935 993 aaKnown RBP16.75■□□□□ 0.27
H3F3B-213ENST00000593254 WTIPA6NIX2 430 aaPredicted RBP16.74■□□□□ 0.27
H3F3B-213ENST00000593254 G3V3G9 751 aa16.74■□□□□ 0.27
H3F3B-213ENST00000593254 CCER2I3L3R5 266 aa16.74■□□□□ 0.27
H3F3B-213ENST00000593254 CCT4P50991 539 aaKnown RBP16.74■□□□□ 0.27
H3F3B-213ENST00000593254 FOXO4P98177 505 aa16.74■□□□□ 0.27
H3F3B-213ENST00000593254 HABP4Q5JVS0 413 aaKnown RBP16.74■□□□□ 0.27
H3F3B-213ENST00000593254 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
H3F3B-213ENST00000593254 PRAMEF18Q5VWM3 479 aa16.74■□□□□ 0.27
H3F3B-213ENST00000593254 R3HDMLQ9H3Y0 253 aa16.74■□□□□ 0.27
H3F3B-213ENST00000593254 CEP290O15078 2479 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 USP17L3A6NCW0 530 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 USP17L4A6NCW7 530 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 GRM8O00222 908 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 FKTNO75072 461 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 DSG3P32926 999 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 USP17L1Q7RTZ2 530 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
H3F3B-213ENST00000593254 RBBP6Q7Z6E9 1792 aaKnown RBP16.72■□□□□ 0.27
H3F3B-213ENST00000593254 SREBF2Q12772 1141 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms