RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 RNF186Q9NXI6 227 aa22.46■■□□□ 1.19
RETREG3-212ENST00000593251 NEXNQ0ZGT2 675 aa22.45■■□□□ 1.18
RETREG3-212ENST00000593251 FBXW7Q969H0 707 aa22.45■■□□□ 1.18
RETREG3-212ENST00000593251 CSRNP1Q96S65 589 aa22.45■■□□□ 1.18
RETREG3-212ENST00000593251 BSDC1Q9NW68 430 aaPredicted RBP22.45■■□□□ 1.18
RETREG3-212ENST00000593251 SAGE1Q9NXZ1 904 aa22.45■■□□□ 1.18
RETREG3-212ENST00000593251 MED23Q9ULK4 1368 aa22.45■■□□□ 1.18
RETREG3-212ENST00000593251 NEURL1BA8MQ27 555 aa22.44■■□□□ 1.18
RETREG3-212ENST00000593251 CCT4P50991 539 aaKnown RBP22.44■■□□□ 1.18
RETREG3-212ENST00000593251 MOB2Q70IA6 237 aa22.44■■□□□ 1.18
RETREG3-212ENST00000593251 UBE3BQ7Z3V4 1068 aa22.44■■□□□ 1.18
RETREG3-212ENST00000593251 NBPF9Q3BBW0 867 aa22.43■■□□□ 1.18
RETREG3-212ENST00000593251 PRAMEF18Q5VWM3 479 aa22.43■■□□□ 1.18
RETREG3-212ENST00000593251 RASAL3Q86YV0 1011 aa22.43■■□□□ 1.18
RETREG3-212ENST00000593251 PITPNM2Q9BZ72 1349 aa22.42■■□□□ 1.18
RETREG3-212ENST00000593251 CACNA1FO60840 1977 aa22.42■■□□□ 1.18
RETREG3-212ENST00000593251 TWISTNBQ3B726 338 aaPredicted RBP22.42■■□□□ 1.18
RETREG3-212ENST00000593251 DACT2Q5SW24 774 aa22.42■■□□□ 1.18
RETREG3-212ENST00000593251 TXNRD3Q86VQ6 643 aa22.42■■□□□ 1.18
RETREG3-212ENST00000593251 TNRC18O15417 2968 aaPredicted RBP22.42■■□□□ 1.18
RETREG3-212ENST00000593251 H7C1W4 665 aa22.41■■□□□ 1.18
RETREG3-212ENST00000593251 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
RETREG3-212ENST00000593251 WWC1Q8IX03 1113 aa22.4■■□□□ 1.18
RETREG3-212ENST00000593251 A0A1B0GUL6 1792 aa22.4■■□□□ 1.18
RETREG3-212ENST00000593251 UBE2Q2LH0YL09 131 aa22.39■■□□□ 1.17
RETREG3-212ENST00000593251 KLRK1P26718 216 aa22.39■■□□□ 1.17
RETREG3-212ENST00000593251 IGHMBP2P38935 993 aaKnown RBP22.39■■□□□ 1.17
RETREG3-212ENST00000593251 FKBP1BP68106 108 aa22.39■■□□□ 1.17
RETREG3-212ENST00000593251 SASH1O94885 1247 aa22.38■■□□□ 1.17
RETREG3-212ENST00000593251 ITGA6P23229 1130 aa22.38■■□□□ 1.17
RETREG3-212ENST00000593251 GCKRQ14397 625 aa22.38■■□□□ 1.17
RETREG3-212ENST00000593251 COA1Q9GZY4 146 aa22.38■■□□□ 1.17
RETREG3-212ENST00000593251 WNT10BO00744 389 aa22.37■■□□□ 1.17
RETREG3-212ENST00000593251 FLIIQ13045 1269 aa22.37■■□□□ 1.17
RETREG3-212ENST00000593251 TTLL12Q14166 644 aaPredicted RBP22.37■■□□□ 1.17
RETREG3-212ENST00000593251 CCDC27Q2M243 656 aa22.37■■□□□ 1.17
RETREG3-212ENST00000593251 STRIP1Q5VSL9 837 aa22.37■■□□□ 1.17
RETREG3-212ENST00000593251 OGFOD1Q8N543 542 aa22.37■■□□□ 1.17
RETREG3-212ENST00000593251 LEMD3Q9Y2U8 911 aa22.37■■□□□ 1.17
RETREG3-212ENST00000593251 ZNF804BA4D1E1 1349 aa22.36■■□□□ 1.17
RETREG3-212ENST00000593251 CASP7P55210 303 aa22.36■■□□□ 1.17
RETREG3-212ENST00000593251 MYO3BQ8WXR4 1341 aa22.35■■□□□ 1.17
RETREG3-212ENST00000593251 FKBP5Q13451 457 aaPredicted RBP22.35■■□□□ 1.17
RETREG3-212ENST00000593251 TTLL5Q6EMB2 1281 aa22.35■■□□□ 1.17
RETREG3-212ENST00000593251 PLA2G12BQ9BX93 195 aa22.35■■□□□ 1.17
RETREG3-212ENST00000593251 ECM29Q5VYK3 1845 aa22.34■■□□□ 1.17
RETREG3-212ENST00000593251 SOX10P56693 466 aa22.34■■□□□ 1.17
RETREG3-212ENST00000593251 KIAA0825Q8IV33 1275 aa22.34■■□□□ 1.17
RETREG3-212ENST00000593251 REM2Q8IYK8 340 aaPredicted RBP22.34■■□□□ 1.17
RETREG3-212ENST00000593251 DNAAF4Q8WXU2 420 aa22.34■■□□□ 1.17
RETREG3-212ENST00000593251 MPHOSPH8Q99549 860 aa22.34■■□□□ 1.17
RETREG3-212ENST00000593251 ANKRD2Q9GZV1 360 aa22.34■■□□□ 1.17
RETREG3-212ENST00000593251 CSF1RP07333 972 aa22.33■■□□□ 1.17
RETREG3-212ENST00000593251 GTF2IP78347 998 aa22.33■■□□□ 1.17
RETREG3-212ENST00000593251 MKRN3Q13064 507 aaKnown RBP22.33■■□□□ 1.17
RETREG3-212ENST00000593251 PRKG1Q13976 671 aa22.33■■□□□ 1.17
RETREG3-212ENST00000593251 FANCIQ9NVI1 1328 aa22.32■■□□□ 1.16
RETREG3-212ENST00000593251 SNAP23O00161 211 aa22.32■■□□□ 1.16
RETREG3-212ENST00000593251 KCNJ4P48050 445 aa22.32■■□□□ 1.16
RETREG3-212ENST00000593251 CHRNDQ07001 517 aa22.32■■□□□ 1.16
RETREG3-212ENST00000593251 CTU1Q7Z7A3 348 aaKnown RBP22.32■■□□□ 1.16
RETREG3-212ENST00000593251 MYH16Q9H6N6 1097 aa22.32■■□□□ 1.16
RETREG3-212ENST00000593251 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
RETREG3-212ENST00000593251 IL16Q14005 1332 aa22.31■■□□□ 1.16
RETREG3-212ENST00000593251 TBC1D8O95759 1140 aa22.31■■□□□ 1.16
RETREG3-212ENST00000593251 NF2P35240 595 aa22.31■■□□□ 1.16
RETREG3-212ENST00000593251 HELBQ8NG08 1087 aaPredicted RBP22.31■■□□□ 1.16
RETREG3-212ENST00000593251 LINS1Q8NG48 757 aa22.31■■□□□ 1.16
RETREG3-212ENST00000593251 TAF5LO75529 589 aa22.3■■□□□ 1.16
RETREG3-212ENST00000593251 HDAC9Q9UKV0 1011 aa22.3■■□□□ 1.16
RETREG3-212ENST00000593251 ANKRD18BA2A2Z9 1011 aa22.29■■□□□ 1.16
RETREG3-212ENST00000593251 SLC34A2O95436 690 aa22.29■■□□□ 1.16
RETREG3-212ENST00000593251 PTPN12Q05209 780 aaKnown RBP22.29■■□□□ 1.16
RETREG3-212ENST00000593251 CD209Q9NNX6 404 aa22.29■■□□□ 1.16
RETREG3-212ENST00000593251 FZD1Q9UP38 647 aa22.29■■□□□ 1.16
RETREG3-212ENST00000593251 F6X3S4 739 aa22.28■■□□□ 1.16
RETREG3-212ENST00000593251 VAMP4O75379 141 aa22.28■■□□□ 1.16
RETREG3-212ENST00000593251 EXOSC9Q06265 439 aaKnown RBP22.28■■□□□ 1.16
RETREG3-212ENST00000593251 APOBEC3FQ8IUX4 373 aaKnown RBP22.28■■□□□ 1.16
RETREG3-212ENST00000593251 ZBED3Q96IU2 234 aaPredicted RBP22.28■■□□□ 1.16
RETREG3-212ENST00000593251 CHMP3Q9Y3E7 222 aa22.28■■□□□ 1.16
RETREG3-212ENST00000593251 FOXO4P98177 505 aa22.27■■□□□ 1.16
RETREG3-212ENST00000593251 CERS5Q8N5B7 392 aa22.27■■□□□ 1.16
RETREG3-212ENST00000593251 ZNF296Q8WUU4 475 aaPredicted RBP22.27■■□□□ 1.16
RETREG3-212ENST00000593251 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.27■■□□□ 1.16
RETREG3-212ENST00000593251 PCDHAC2Q9Y5I4 1007 aa22.27■■□□□ 1.16
RETREG3-212ENST00000593251 IRS2Q9Y4H2 1338 aa22.27■■□□□ 1.16
RETREG3-212ENST00000593251 TM4SF4P48230 202 aa22.26■■□□□ 1.15
RETREG3-212ENST00000593251 MMP14P50281 582 aa22.26■■□□□ 1.15
RETREG3-212ENST00000593251 ARMC9Q7Z3E5 817 aa22.26■■□□□ 1.15
RETREG3-212ENST00000593251 MRS2Q9HD23 443 aa22.26■■□□□ 1.15
RETREG3-212ENST00000593251 ANGEL1Q9UNK9 670 aaKnown RBP22.26■■□□□ 1.15
RETREG3-212ENST00000593251 F8W031 263 aaPredicted RBP22.25■■□□□ 1.15
RETREG3-212ENST00000593251 DLGAP5Q15398 846 aa22.25■■□□□ 1.15
RETREG3-212ENST00000593251 HPS5Q9UPZ3 1129 aa22.25■■□□□ 1.15
RETREG3-212ENST00000593251 PDE4DIPQ5VU43 2346 aa22.25■■□□□ 1.15
RETREG3-212ENST00000593251 IFIT5Q13325 482 aaKnown RBP22.24■■□□□ 1.15
RETREG3-212ENST00000593251 ZNF594Q96JF6 807 aaPredicted RBP22.24■■□□□ 1.15
RETREG3-212ENST00000593251 JAG2Q9Y219 1238 aa22.24■■□□□ 1.15
RETREG3-212ENST00000593251 EPHA10Q5JZY3 1008 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms