RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF526Q8TF50 670 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-221ENST00000593026 COA1Q9GZY4 146 aa18.49■□□□□ 0.55
DDX39A-221ENST00000593026 KDM2BQ8NHM5 1336 aa18.49■□□□□ 0.55
DDX39A-221ENST00000593026 IRS2Q9Y4H2 1338 aa18.49■□□□□ 0.55
DDX39A-221ENST00000593026 YDJCA8MPS7 323 aa18.48■□□□□ 0.55
DDX39A-221ENST00000593026 CENPBP07199 599 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-221ENST00000593026 IFIT1P09914 478 aaKnown RBP18.48■□□□□ 0.55
DDX39A-221ENST00000593026 TFCP2Q12800 502 aa18.48■□□□□ 0.55
DDX39A-221ENST00000593026 ZNF804AQ7Z570 1209 aa18.48■□□□□ 0.55
DDX39A-221ENST00000593026 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
DDX39A-221ENST00000593026 DDNO94850 711 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-221ENST00000593026 SLC5A1P13866 664 aa18.47■□□□□ 0.55
DDX39A-221ENST00000593026 FGFR2P21802 821 aa18.47■□□□□ 0.55
DDX39A-221ENST00000593026 CXCL9Q07325 125 aa18.47■□□□□ 0.55
DDX39A-221ENST00000593026 AAMPQ13685 434 aa18.47■□□□□ 0.55
DDX39A-221ENST00000593026 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
DDX39A-221ENST00000593026 EXOC6Q8TAG9 804 aa18.47■□□□□ 0.55
DDX39A-221ENST00000593026 LPIN2Q92539 896 aa18.47■□□□□ 0.55
DDX39A-221ENST00000593026 RAD17O75943 681 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-221ENST00000593026 TNIP1Q15025 636 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 HSP90AB4PQ58FF6 505 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 CIAPIN1Q6FI81 312 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 PODNQ7Z5L7 613 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 GPC2Q8N158 579 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 AKAP2Q9Y2D5 859 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 GJA3Q9Y6H8 435 aa18.46■□□□□ 0.55
DDX39A-221ENST00000593026 SASH1O94885 1247 aa18.45■□□□□ 0.54
DDX39A-221ENST00000593026 GYG1P46976 350 aa18.45■□□□□ 0.54
DDX39A-221ENST00000593026 C1QTNF8P60827 252 aa18.45■□□□□ 0.54
DDX39A-221ENST00000593026 CAVIN4Q5BKX8 364 aa18.45■□□□□ 0.54
DDX39A-221ENST00000593026 ERC1Q8IUD2 1116 aa18.45■□□□□ 0.54
DDX39A-221ENST00000593026 CD209Q9NNX6 404 aa18.45■□□□□ 0.54
DDX39A-221ENST00000593026 PCDHB15Q9Y5E8 787 aa18.45■□□□□ 0.54
DDX39A-221ENST00000593026 HIBADHP31937 336 aaKnown RBP18.44■□□□□ 0.54
DDX39A-221ENST00000593026 VPS37DQ86XT2 251 aa18.44■□□□□ 0.54
DDX39A-221ENST00000593026 FAM84BQ96KN1 310 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-221ENST00000593026 KCNQ5Q9NR82 932 aa18.44■□□□□ 0.54
DDX39A-221ENST00000593026 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
DDX39A-221ENST00000593026 ARAP2Q8WZ64 1704 aa18.43■□□□□ 0.54
DDX39A-221ENST00000593026 ZNF609O15014 1411 aa18.43■□□□□ 0.54
DDX39A-221ENST00000593026 PSMD14O00487 310 aa18.43■□□□□ 0.54
DDX39A-221ENST00000593026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-221ENST00000593026 WDR90Q96KV7 1748 aa18.43■□□□□ 0.54
DDX39A-221ENST00000593026 PSME4Q14997 1843 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 A0A1B0GUL7 405 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 USP17L3A6NCW0 530 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 USP17L4A6NCW7 530 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 IL1R1P14778 569 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 TIMM10P62072 90 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 USP17L1Q7RTZ2 530 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 FBXO33Q7Z6M2 555 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 FBXW7Q969H0 707 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 L3MBTL3Q96JM7 780 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-221ENST00000593026 GPR108Q9NPR9 543 aa18.42■□□□□ 0.54
DDX39A-221ENST00000593026 APBB1O00213 710 aa18.41■□□□□ 0.54
DDX39A-221ENST00000593026 BCAMP50895 628 aa18.41■□□□□ 0.54
DDX39A-221ENST00000593026 NEUROD6Q96NK8 337 aa18.41■□□□□ 0.54
DDX39A-221ENST00000593026 NMRK2Q9NPI5 230 aa18.41■□□□□ 0.54
DDX39A-221ENST00000593026 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 VIL1P09327 827 aaKnown RBP18.4■□□□□ 0.54
DDX39A-221ENST00000593026 ADORA1P30542 326 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 GMPSP49915 693 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-221ENST00000593026 TNNI3KQ59H18 835 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 STRIP1Q5VSL9 837 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
DDX39A-221ENST00000593026 RHPN1Q8TCX5 695 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 RRAGCQ9HB90 399 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 FPGT-TNNI3KV9GXZ4 949 aa18.4■□□□□ 0.54
DDX39A-221ENST00000593026 IQCA1LA6NCM1 817 aa18.39■□□□□ 0.53
DDX39A-221ENST00000593026 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-221ENST00000593026 VEGFAP15692 232 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-221ENST00000593026 LMOD1P29536 600 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-221ENST00000593026 GTF2IP78347 998 aa18.39■□□□□ 0.53
DDX39A-221ENST00000593026 TTLL5Q6EMB2 1281 aa18.39■□□□□ 0.53
DDX39A-221ENST00000593026 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
DDX39A-221ENST00000593026 IQSEC3Q9UPP2 1182 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-221ENST00000593026 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-221ENST00000593026 ZNF646O15015 1829 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-221ENST00000593026 SCN4AP35499 1836 aa18.38■□□□□ 0.53
DDX39A-221ENST00000593026 RPS12P25398 132 aaKnown RBP18.38■□□□□ 0.53
DDX39A-221ENST00000593026 SCNN1DP51172 638 aa18.38■□□□□ 0.53
DDX39A-221ENST00000593026 DACT2Q5SW24 774 aa18.38■□□□□ 0.53
DDX39A-221ENST00000593026 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
DDX39A-221ENST00000593026 RSBN1LQ6PCB5 846 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-221ENST00000593026 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
DDX39A-221ENST00000593026 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
DDX39A-221ENST00000593026 GNL3LQ9NVN8 582 aaKnown RBP18.38■□□□□ 0.53
DDX39A-221ENST00000593026 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
DDX39A-221ENST00000593026 POTECB2RU33 542 aa18.37■□□□□ 0.53
DDX39A-221ENST00000593026 PHKA1P46020 1223 aa18.37■□□□□ 0.53
DDX39A-221ENST00000593026 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-221ENST00000593026 CCDC102BQ68D86 513 aa18.37■□□□□ 0.53
DDX39A-221ENST00000593026 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
DDX39A-221ENST00000593026 AGBL3Q8NEM8 1001 aa18.37■□□□□ 0.53
DDX39A-221ENST00000593026 GPRC5DQ9NZD1 345 aa18.37■□□□□ 0.53
DDX39A-221ENST00000593026 MYO3BQ8WXR4 1341 aa18.37■□□□□ 0.53
DDX39A-221ENST00000593026 FAM205AQ6ZU69 1335 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms