RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
DDX39A-219ENST00000592927 FOXO4P98177 505 aa14.82□□□□□ -0.04
DDX39A-219ENST00000592927 TTLL11Q8NHH1 800 aa14.82□□□□□ -0.04
DDX39A-219ENST00000592927 CCDC85AQ96PX6 553 aaPredicted RBP14.82□□□□□ -0.04
DDX39A-219ENST00000592927 ZBTB40Q9NUA8 1239 aa14.82□□□□□ -0.04
DDX39A-219ENST00000592927 GNAI2P04899 355 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 EPHA10Q5JZY3 1008 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 DLK2Q6UY11 383 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 USP48Q86UV5 1035 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 KAZALD1Q96I82 304 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 CRAMP1Q96RY5 1269 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 BICC1Q9H694 974 aaKnown RBP14.81□□□□□ -0.04
DDX39A-219ENST00000592927 CHMP3Q9Y3E7 222 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 LRRFIP2Q9Y608 721 aaKnown RBP14.81□□□□□ -0.04
DDX39A-219ENST00000592927 SNED1Q8TER0 1413 aa14.81□□□□□ -0.04
DDX39A-219ENST00000592927 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
DDX39A-219ENST00000592927 CSF1RP07333 972 aa14.8□□□□□ -0.04
DDX39A-219ENST00000592927 HIRAP54198 1017 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-219ENST00000592927 PKN2Q16513 984 aaKnown RBP14.8□□□□□ -0.04
DDX39A-219ENST00000592927 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
DDX39A-219ENST00000592927 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-219ENST00000592927 NIM1KQ8IY84 436 aa14.8□□□□□ -0.04
DDX39A-219ENST00000592927 ZC3H15Q8WU90 426 aaKnown RBP14.8□□□□□ -0.04
DDX39A-219ENST00000592927 CCDC102AQ96A19 550 aa14.8□□□□□ -0.04
DDX39A-219ENST00000592927 CSRNP1Q96S65 589 aa14.8□□□□□ -0.04
DDX39A-219ENST00000592927 GREM2Q9H772 168 aa14.8□□□□□ -0.04
DDX39A-219ENST00000592927 GMPSP49915 693 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-219ENST00000592927 ZNF157P51786 506 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-219ENST00000592927 LAMB2P55268 1798 aa14.79□□□□□ -0.04
DDX39A-219ENST00000592927 HDAC9Q9UKV0 1011 aa14.79□□□□□ -0.04
DDX39A-219ENST00000592927 RTL9Q8NET4 1388 aa14.78□□□□□ -0.04
DDX39A-219ENST00000592927 BBOX1O75936 387 aa14.78□□□□□ -0.04
DDX39A-219ENST00000592927 CXCL9Q07325 125 aa14.78□□□□□ -0.04
DDX39A-219ENST00000592927 IFIT5Q13325 482 aaKnown RBP14.78□□□□□ -0.04
DDX39A-219ENST00000592927 GRAPQ13588 217 aa14.78□□□□□ -0.04
DDX39A-219ENST00000592927 CCDC57Q2TAC2 916 aa14.78□□□□□ -0.04
DDX39A-219ENST00000592927 RABL6Q3YEC7 729 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-219ENST00000592927 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
DDX39A-219ENST00000592927 GRAPLQ8TC17 118 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-219ENST00000592927 CDC5LQ99459 802 aaKnown RBP14.78□□□□□ -0.04
DDX39A-219ENST00000592927 RWDD1Q9H446 243 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-219ENST00000592927 SEC31BQ9NQW1 1179 aa14.78□□□□□ -0.04
DDX39A-219ENST00000592927 ANKRD18BA2A2Z9 1011 aa14.77□□□□□ -0.05
DDX39A-219ENST00000592927 ITGA6P23229 1130 aa14.77□□□□□ -0.05
DDX39A-219ENST00000592927 RPS8P62241 208 aaKnown RBP14.77□□□□□ -0.05
DDX39A-219ENST00000592927 PPEF1O14829 653 aaPredicted RBP14.76□□□□□ -0.05
DDX39A-219ENST00000592927 PPIP5K2O43314 1243 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 HDAC1Q13547 482 aaPredicted RBP14.76□□□□□ -0.05
DDX39A-219ENST00000592927 TAF7LQ5H9L4 462 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 SLC51AQ86UW1 340 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 C2orf69Q8N8R5 385 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 TRPM4Q8TD43 1214 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 CELF1Q92879 486 aaKnown RBP14.76□□□□□ -0.05
DDX39A-219ENST00000592927 TMX4Q9H1E5 349 aaPredicted RBP14.76□□□□□ -0.05
DDX39A-219ENST00000592927 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 GBA2Q9HCG7 927 aaPredicted RBP14.76□□□□□ -0.05
DDX39A-219ENST00000592927 PCDHB15Q9Y5E8 787 aa14.76□□□□□ -0.05
DDX39A-219ENST00000592927 IGHMBP2P38935 993 aaKnown RBP14.75□□□□□ -0.05
DDX39A-219ENST00000592927 AOC3Q16853 763 aa14.75□□□□□ -0.05
DDX39A-219ENST00000592927 GRIPAP1Q4V328 841 aa14.75□□□□□ -0.05
DDX39A-219ENST00000592927 TMC4Q7Z404 712 aa14.75□□□□□ -0.05
DDX39A-219ENST00000592927 ZNF296Q8WUU4 475 aaPredicted RBP14.74□□□□□ -0.05
DDX39A-219ENST00000592927 MPHOSPH8Q99549 860 aa14.74□□□□□ -0.05
DDX39A-219ENST00000592927 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
DDX39A-219ENST00000592927 ATP6V0A2Q9Y487 856 aa14.74□□□□□ -0.05
DDX39A-219ENST00000592927 SRGAP3O43295 1099 aa14.73□□□□□ -0.05
DDX39A-219ENST00000592927 SLC10A3P09131 477 aa14.73□□□□□ -0.05
DDX39A-219ENST00000592927 MTX1Q13505 466 aa14.73□□□□□ -0.05
DDX39A-219ENST00000592927 FBXO46Q6PJ61 603 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-219ENST00000592927 RPAP2Q8IXW5 612 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-219ENST00000592927 SP8Q8IXZ3 490 aa14.73□□□□□ -0.05
DDX39A-219ENST00000592927 SLC17A8Q8NDX2 589 aa14.73□□□□□ -0.05
DDX39A-219ENST00000592927 MYH3P11055 1940 aa14.72□□□□□ -0.05
DDX39A-219ENST00000592927 SHTN1A0MZ66 631 aa14.72□□□□□ -0.05
DDX39A-219ENST00000592927 TBC1D8O95759 1140 aa14.72□□□□□ -0.05
DDX39A-219ENST00000592927 ATP8B2P98198 1209 aa14.72□□□□□ -0.05
DDX39A-219ENST00000592927 LDHAL6AQ6ZMR3 332 aa14.72□□□□□ -0.05
DDX39A-219ENST00000592927 ZNF594Q96JF6 807 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-219ENST00000592927 BSDC1Q9NW68 430 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-219ENST00000592927 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
DDX39A-219ENST00000592927 COLQQ9Y215 455 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-219ENST00000592927 RAD17O75943 681 aa14.71□□□□□ -0.05
DDX39A-219ENST00000592927 IGHDP01880 384 aa14.71□□□□□ -0.05
DDX39A-219ENST00000592927 CEP85Q6P2H3 762 aa14.71□□□□□ -0.05
DDX39A-219ENST00000592927 KRT26Q7Z3Y9 468 aa14.71□□□□□ -0.05
DDX39A-219ENST00000592927 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
DDX39A-219ENST00000592927 CNNM1Q9NRU3 951 aa14.71□□□□□ -0.05
DDX39A-219ENST00000592927 PNMA6EA0A0J9YXQ4 647 aa14.7□□□□□ -0.06
DDX39A-219ENST00000592927 POTEFA5A3E0 1075 aa14.7□□□□□ -0.06
DDX39A-219ENST00000592927 H7C1D1 291 aa14.7□□□□□ -0.06
DDX39A-219ENST00000592927 RFX5P48382 616 aaPredicted RBP14.7□□□□□ -0.06
DDX39A-219ENST00000592927 KLHDC4Q8TBB5 520 aa14.7□□□□□ -0.06
DDX39A-219ENST00000592927 VPS33BQ9H267 617 aa14.7□□□□□ -0.06
DDX39A-219ENST00000592927 ADM5C9JUS6 153 aa14.69□□□□□ -0.06
DDX39A-219ENST00000592927 PTPN12Q05209 780 aaKnown RBP14.69□□□□□ -0.06
DDX39A-219ENST00000592927 TNIP1Q15025 636 aa14.69□□□□□ -0.06
DDX39A-219ENST00000592927 MPNDQ8N594 471 aa14.69□□□□□ -0.06
DDX39A-219ENST00000592927 SSH3Q8TE77 659 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms