RNA–Protein interactions for RNA: ENST00000592848.5

BCAS3-231, Transcript of BCAS3, microtubule associated cell migration factor, human

TSL 5

Gene BCAS3, Length 918 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-231	ENST00000592848	NOP58	Q9Y2X3	529 aa	Known RBP	11.28	□□□□□ -0.6
BCAS3-231	ENST00000592848	ARAP2	Q8WZ64	1704 aa		11.28	□□□□□ -0.6
BCAS3-231	ENST00000592848	ZNF609	O15014	1411 aa		11.27	□□□□□ -0.6
BCAS3-231	ENST00000592848	RIMBP2	O15034	1052 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	GORAB	Q5T7V8	394 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	ATG9A	Q7Z3C6	839 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	LPIN2	Q92539	896 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	COA1	Q9GZY4	146 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	RWDD1	Q9H446	243 aa	Predicted RBP	11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	ZNRF3	Q9ULT6	936 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	EXOC6B	Q9Y2D4	811 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	CCDC88A	Q3V6T2	1871 aa		11.27	□□□□□ -0.61
BCAS3-231	ENST00000592848	ECE2	O60344	883 aa		11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	TFCP2	Q12800	502 aa		11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	TNIP1	Q15025	636 aa		11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	C15orf52	Q6ZUT6	534 aa	Known RBP	11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	VGLL2	Q8N8G2	317 aa		11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	KIF1BP	Q96EK5	621 aa		11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	GPR101	Q96P66	508 aa	Predicted RBP	11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	GNL3L	Q9NVN8	582 aa	Known RBP	11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	KDM2B	Q8NHM5	1336 aa		11.26	□□□□□ -0.61
BCAS3-231	ENST00000592848	APBB1	O00213	710 aa		11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	FRAT2	O75474	233 aa	Predicted RBP	11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	HDAC1	Q13547	482 aa	Predicted RBP	11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	DPY19L2	Q6NUT2	758 aa		11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	SIRT2	Q8IXJ6	389 aa		11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	CLASRP	Q8N2M8	674 aa	Known RBP	11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	LRRCC1	Q9C099	1032 aa		11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	DBNDD1	Q9H9R9	158 aa		11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	GPR108	Q9NPR9	543 aa		11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	PCDHB15	Q9Y5E8	787 aa		11.25	□□□□□ -0.61
BCAS3-231	ENST00000592848	UTRN	P46939	3433 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848		A0A1B0GUL7	405 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	YY1	P25490	414 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	HIBADH	P31937	336 aa	Known RBP	11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	DOK7	Q18PE1	504 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	PODN	Q7Z5L7	613 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	FBXW7	Q969H0	707 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	GCC1	Q96CN9	775 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	NEUROD6	Q96NK8	337 aa		11.24	□□□□□ -0.61
BCAS3-231	ENST00000592848	FZD9	O00144	591 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	FGFR2	P21802	821 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	TNNI3K	Q59H18	835 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	CIAPIN1	Q6FI81	312 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	GPC2	Q8N158	579 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	RHPN1	Q8TCX5	695 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	GPATCH3	Q96I76	525 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	DCTPP1	Q9H773	170 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	FPGT-TNNI3K	V9GXZ4	949 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	COL4A5	P29400	1685 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	MYH13	Q9UKX3	1938 aa		11.23	□□□□□ -0.61
BCAS3-231	ENST00000592848	USP17L3	A6NCW0	530 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	USP17L4	A6NCW7	530 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	SNAP23	O00161	211 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	SEMA3E	O15041	775 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	RAD17	O75943	681 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	SASH1	O94885	1247 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	IFIT2	P09913	472 aa	Known RBP	11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	KLRK1	P26718	216 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	LMOD1	P29536	600 aa	Predicted RBP	11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	GYG1	P46976	350 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	PRELP	P51888	382 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	USP17L1	Q7RTZ2	530 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	AACS	Q86V21	672 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	MYO3B	Q8WXR4	1341 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	ZNF541	Q9H0D2	1346 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	CD209	Q9NNX6	404 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	GJA3	Q9Y6H8	435 aa		11.22	□□□□□ -0.61
BCAS3-231	ENST00000592848	PSME4	Q14997	1843 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	IRS2	Q9Y4H2	1338 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	IQCA1L	A6NCM1	817 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	GLTPD2	A6NH11	291 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	UQCRFS1P1	P0C7P4	283 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	IL1R1	P14778	569 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	RPS12	P25398	132 aa	Known RBP	11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	CCDC158	Q5M9N0	1113 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	TTC39A	Q5SRH9	613 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	ERICH6B	Q5W0A0	696 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	XAGE2	Q96GT9	111 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	BCL11A	Q9H165	835 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	IL1RAPL2	Q9NP60	686 aa		11.21	□□□□□ -0.61
BCAS3-231	ENST00000592848	CXCL9	Q07325	125 aa		11.2	□□□□□ -0.62
BCAS3-231	ENST00000592848	STRIP1	Q5VSL9	837 aa		11.2	□□□□□ -0.62
BCAS3-231	ENST00000592848	FBXO33	Q7Z6M2	555 aa		11.2	□□□□□ -0.62
BCAS3-231	ENST00000592848	TXNRD3	Q86VQ6	643 aa		11.2	□□□□□ -0.62
BCAS3-231	ENST00000592848	TBC1D22A	Q8WUA7	517 aa		11.2	□□□□□ -0.62
BCAS3-231	ENST00000592848	FAM84B	Q96KN1	310 aa	Predicted RBP	11.2	□□□□□ -0.62
BCAS3-231	ENST00000592848	DENND2A	Q9ULE3	1009 aa		11.2	□□□□□ -0.62
BCAS3-231	ENST00000592848	PDS5A	Q29RF7	1337 aa	Known RBP	11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	WDR90	Q96KV7	1748 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	WTIP	A6NIX2	430 aa	Predicted RBP	11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	YDJC	A8MPS7	323 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	PSMD14	O00487	310 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	ADORA1	P30542	326 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	BCAM	P50895	628 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	TIMM10	P62072	90 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	GTF2I	P78347	998 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	CHAF1A	Q13111	956 aa	Predicted RBP	11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	CCDC102B	Q68D86	513 aa		11.19	□□□□□ -0.62
BCAS3-231	ENST00000592848	TTLL5	Q6EMB2	1281 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms