RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 ECE2O60344 883 aa12.32□□□□□ -0.44
TPM4-216ENST00000592822 HMMRO75330 724 aa12.32□□□□□ -0.44
TPM4-216ENST00000592822 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
TPM4-216ENST00000592822 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
TPM4-216ENST00000592822 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 G3V3G9 751 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 EIF6P56537 245 aaKnown RBP12.31□□□□□ -0.44
TPM4-216ENST00000592822 CXCL9Q07325 125 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
TPM4-216ENST00000592822 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 LPIN2Q92539 896 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 COA1Q9GZY4 146 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 PSME4Q14997 1843 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 ARAP2Q8WZ64 1704 aa12.31□□□□□ -0.44
TPM4-216ENST00000592822 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
TPM4-216ENST00000592822 RAD17O75943 681 aa12.3□□□□□ -0.44
TPM4-216ENST00000592822 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
TPM4-216ENST00000592822 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
TPM4-216ENST00000592822 GYG1P46976 350 aa12.3□□□□□ -0.44
TPM4-216ENST00000592822 AAMPQ13685 434 aa12.3□□□□□ -0.44
TPM4-216ENST00000592822 ATP2B3Q16720 1220 aa12.3□□□□□ -0.44
TPM4-216ENST00000592822 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
TPM4-216ENST00000592822 FBXO33Q7Z6M2 555 aa12.3□□□□□ -0.44
TPM4-216ENST00000592822 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
TPM4-216ENST00000592822 FAM84BQ96KN1 310 aaPredicted RBP12.3□□□□□ -0.44
TPM4-216ENST00000592822 CD209Q9NNX6 404 aa12.3□□□□□ -0.44
TPM4-216ENST00000592822 IFIT1P09914 478 aaKnown RBP12.29□□□□□ -0.44
TPM4-216ENST00000592822 SLC5A1P13866 664 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 HIBADHP31937 336 aaKnown RBP12.29□□□□□ -0.44
TPM4-216ENST00000592822 TIMM10P62072 90 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 ZNF804AQ7Z570 1209 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 GPC2Q8N158 579 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 ZNF784Q8NCA9 323 aaPredicted RBP12.29□□□□□ -0.44
TPM4-216ENST00000592822 AKAP2Q9Y2D5 859 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 GJA3Q9Y6H8 435 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
TPM4-216ENST00000592822 ZNF609O15014 1411 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 A0A1B0GUL7 405 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 PSMD14O00487 310 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 IL1R1P14778 569 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 ADORA1P30542 326 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 BCAMP50895 628 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 TNIP1Q15025 636 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 HSP90AB4PQ58FF6 505 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 ERC1Q8IUD2 1116 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 GPR108Q9NPR9 543 aa12.28□□□□□ -0.44
TPM4-216ENST00000592822 USP17L3A6NCW0 530 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 USP17L4A6NCW7 530 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 POTECB2RU33 542 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 APBB1O00213 710 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
TPM4-216ENST00000592822 TNNI3KQ59H18 835 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 CAVIN4Q5BKX8 364 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 USP17L1Q7RTZ2 530 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 TDRD7Q8NHU6 1098 aaKnown RBP12.27□□□□□ -0.45
TPM4-216ENST00000592822 RHPN1Q8TCX5 695 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 XAGE2Q96GT9 111 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
TPM4-216ENST00000592822 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 NMRK2Q9NPI5 230 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 FPGT-TNNI3KV9GXZ4 949 aa12.27□□□□□ -0.45
TPM4-216ENST00000592822 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 PHKA1P46020 1223 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 GMPSP49915 693 aaPredicted RBP12.26□□□□□ -0.45
TPM4-216ENST00000592822 GTF2IP78347 998 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
TPM4-216ENST00000592822 DACT2Q5SW24 774 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 STRIP1Q5VSL9 837 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 VPS37DQ86XT2 251 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 EAF2Q96CJ1 260 aaPredicted RBP12.26□□□□□ -0.45
TPM4-216ENST00000592822 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 MXD3Q9BW11 206 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 GPBP1L1Q9HC44 474 aaPredicted RBP12.26□□□□□ -0.45
TPM4-216ENST00000592822 IL1RAPL2Q9NP60 686 aa12.26□□□□□ -0.45
TPM4-216ENST00000592822 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
TPM4-216ENST00000592822 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
TPM4-216ENST00000592822 SCN4AP35499 1836 aa12.25□□□□□ -0.45
TPM4-216ENST00000592822 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
TPM4-216ENST00000592822 SCNN1DP51172 638 aa12.25□□□□□ -0.45
TPM4-216ENST00000592822 CCDC102BQ68D86 513 aa12.25□□□□□ -0.45
TPM4-216ENST00000592822 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
TPM4-216ENST00000592822 RSBN1LQ6PCB5 846 aaPredicted RBP12.25□□□□□ -0.45
TPM4-216ENST00000592822 COL1A1P02452 1464 aaPredicted RBP12.24□□□□□ -0.45
TPM4-216ENST00000592822 FAM205AQ6ZU69 1335 aa12.24□□□□□ -0.45
TPM4-216ENST00000592822 FBXW7Q969H0 707 aa12.24□□□□□ -0.45
TPM4-216ENST00000592822 GMLQ99445 158 aa12.24□□□□□ -0.45
TPM4-216ENST00000592822 DBNDD2Q9BQY9 259 aa12.24□□□□□ -0.45
TPM4-216ENST00000592822 CCDC8Q9H0W5 538 aaPredicted RBP12.24□□□□□ -0.45
TPM4-216ENST00000592822 TLR7Q9NYK1 1049 aaKnown RBP12.24□□□□□ -0.45
TPM4-216ENST00000592822 GPRC5DQ9NZD1 345 aa12.24□□□□□ -0.45
TPM4-216ENST00000592822 DBNLQ9UJU6 430 aaKnown RBP12.24□□□□□ -0.45
TPM4-216ENST00000592822 JAG2Q9Y219 1238 aa12.24□□□□□ -0.45
TPM4-216ENST00000592822 SHTN1A0MZ66 631 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms