RNA–Protein interactions for RNA: ENST00000592264.1

ZNF397-211, Transcript of zinc finger protein 397, humanhuman

TSL 3 BASIC

Gene ZNF397, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-211ENST00000592264 TCIRG1Q13488 830 aa9.38□□□□□ -0.91
ZNF397-211ENST00000592264 NLRP10Q86W26 655 aa9.38□□□□□ -0.91
ZNF397-211ENST00000592264 PLBD2Q8NHP8 589 aa9.38□□□□□ -0.91
ZNF397-211ENST00000592264 RPGRQ92834 1020 aaKnown RBP9.38□□□□□ -0.91
ZNF397-211ENST00000592264 LAMB2P55268 1798 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 RNF123Q5XPI4 1314 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 WDR90Q96KV7 1748 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 ELL2O00472 640 aaPredicted RBP9.37□□□□□ -0.91
ZNF397-211ENST00000592264 HOXA10P31260 410 aaPredicted RBP9.37□□□□□ -0.91
ZNF397-211ENST00000592264 FKBP4Q02790 459 aaKnown RBP eCLIP9.37□□□□□ -0.91
ZNF397-211ENST00000592264 CAMK2BQ13554 666 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 CCDC27Q2M243 656 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 SLC10A5Q5PT55 438 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 SLC51AQ86UW1 340 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
ZNF397-211ENST00000592264 C8orf58Q8NAV2 365 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
ZNF397-211ENST00000592264 HYPKQ9NX55 129 aa9.37□□□□□ -0.91
ZNF397-211ENST00000592264 FAM187AA6NFU0 413 aa9.36□□□□□ -0.91
ZNF397-211ENST00000592264 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
ZNF397-211ENST00000592264 RTKN2Q8IZC4 609 aa9.36□□□□□ -0.91
ZNF397-211ENST00000592264 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
ZNF397-211ENST00000592264 TSR2Q969E8 191 aaKnown RBP9.36□□□□□ -0.91
ZNF397-211ENST00000592264 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
ZNF397-211ENST00000592264 NLRP3Q96P20 1036 aa9.36□□□□□ -0.91
ZNF397-211ENST00000592264 CRAMP1Q96RY5 1269 aa9.36□□□□□ -0.91
ZNF397-211ENST00000592264 ISCA1Q9BUE6 129 aa9.36□□□□□ -0.91
ZNF397-211ENST00000592264 ZNF277Q9NRM2 450 aaPredicted RBP9.36□□□□□ -0.91
ZNF397-211ENST00000592264 DDX60Q8IY21 1712 aaKnown RBP9.36□□□□□ -0.91
ZNF397-211ENST00000592264 SH3TC1Q8TE82 1336 aa9.35□□□□□ -0.91
ZNF397-211ENST00000592264 ATP5J2-PTCD1G3V325 749 aa9.35□□□□□ -0.91
ZNF397-211ENST00000592264 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
ZNF397-211ENST00000592264 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
ZNF397-211ENST00000592264 CC2D2BQ6DHV5 1058 aa9.35□□□□□ -0.91
ZNF397-211ENST00000592264 TSPYL6Q8N831 410 aa9.35□□□□□ -0.91
ZNF397-211ENST00000592264 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
ZNF397-211ENST00000592264 PHAXQ9H814 394 aaKnown RBP9.35□□□□□ -0.91
ZNF397-211ENST00000592264 TRMT112Q9UI30 125 aaKnown RBP9.35□□□□□ -0.91
ZNF397-211ENST00000592264 ABCC4O15439 1325 aa9.34□□□□□ -0.91
ZNF397-211ENST00000592264 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
ZNF397-211ENST00000592264 TCERG1O14776 1098 aaKnown RBP9.34□□□□□ -0.91
ZNF397-211ENST00000592264 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
ZNF397-211ENST00000592264 VEGFAP15692 232 aaPredicted RBP9.34□□□□□ -0.91
ZNF397-211ENST00000592264 IARSP41252 1262 aaKnown RBP9.34□□□□□ -0.91
ZNF397-211ENST00000592264 FSTL1Q12841 308 aa9.34□□□□□ -0.91
ZNF397-211ENST00000592264 RIC3Q7Z5B4 369 aa9.34□□□□□ -0.91
ZNF397-211ENST00000592264 PSMD1Q99460 953 aa9.34□□□□□ -0.91
ZNF397-211ENST00000592264 COL4A5P29400 1685 aa9.34□□□□□ -0.91
ZNF397-211ENST00000592264 IL16Q14005 1332 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 CCDC30Q5VVM6 783 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 SPRYD7Q5W111 196 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 NUDT18Q6ZVK8 323 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 SMC1BQ8NDV3 1235 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 FAM89AQ96GI7 184 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
ZNF397-211ENST00000592264 ATP6V0A2Q9Y487 856 aa9.33□□□□□ -0.92
ZNF397-211ENST00000592264 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 LRRC37AA6NMS7 1700 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 PRR20EP86478 221 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 PRR20CP86479 221 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 PRR20DP86480 221 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 PRR20BP86481 221 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 PRR20AP86496 221 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 TRIM28Q13263 835 aaKnown RBP9.32□□□□□ -0.92
ZNF397-211ENST00000592264 GRAPQ13588 217 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 TWISTNBQ3B726 338 aaPredicted RBP9.32□□□□□ -0.92
ZNF397-211ENST00000592264 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
ZNF397-211ENST00000592264 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
ZNF397-211ENST00000592264 GRAPLQ8TC17 118 aaPredicted RBP9.32□□□□□ -0.92
ZNF397-211ENST00000592264 MYD88Q99836 296 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 COL4A1P02462 1669 aa9.32□□□□□ -0.92
ZNF397-211ENST00000592264 FZD9O00144 591 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 BBOX1O75936 387 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 DDX58O95786 925 aaKnown RBP9.31□□□□□ -0.92
ZNF397-211ENST00000592264 SF3B3Q15393 1217 aaKnown RBP9.31□□□□□ -0.92
ZNF397-211ENST00000592264 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
ZNF397-211ENST00000592264 DDX46Q7L014 1031 aaKnown RBP9.31□□□□□ -0.92
ZNF397-211ENST00000592264 WDR63Q8IWG1 891 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 FAM9BQ8IZU0 186 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 EMID1Q96A84 441 aaPredicted RBP9.31□□□□□ -0.92
ZNF397-211ENST00000592264 METTL22Q9BUU2 404 aaPredicted RBP9.31□□□□□ -0.92
ZNF397-211ENST00000592264 CHMP4AQ9BY43 222 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 TMX4Q9H1E5 349 aaPredicted RBP9.31□□□□□ -0.92
ZNF397-211ENST00000592264 DUOX1Q9NRD9 1551 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 TAF1P21675 1872 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 SCN4AP35499 1836 aa9.31□□□□□ -0.92
ZNF397-211ENST00000592264 TNFRSF10AO00220 468 aa9.3□□□□□ -0.92
ZNF397-211ENST00000592264 IRS4O14654 1257 aaPredicted RBP9.3□□□□□ -0.92
ZNF397-211ENST00000592264 ST8SIA5O15466 376 aa9.3□□□□□ -0.92
ZNF397-211ENST00000592264 PPIP5K2O43314 1243 aa9.3□□□□□ -0.92
ZNF397-211ENST00000592264 HTRA3P83110 453 aa9.3□□□□□ -0.92
ZNF397-211ENST00000592264 SLF2Q8IX21 1173 aa9.3□□□□□ -0.92
ZNF397-211ENST00000592264 SP8Q8IXZ3 490 aa9.3□□□□□ -0.92
ZNF397-211ENST00000592264 LARGE2Q8N3Y3 721 aa9.3□□□□□ -0.92
ZNF397-211ENST00000592264 ZBTB38Q8NAP3 1195 aaPredicted RBP9.3□□□□□ -0.92
ZNF397-211ENST00000592264 CELF1Q92879 486 aaKnown RBP9.3□□□□□ -0.92
ZNF397-211ENST00000592264 STK31Q9BXU1 1019 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms