RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 PLA2G2CQ5R387 149 aa10.91□□□□□ -0.66
DNMT1-224ENST00000591764 SPRYD7Q5W111 196 aa10.91□□□□□ -0.66
DNMT1-224ENST00000591764 ZNF541Q9H0D2 1346 aa10.9□□□□□ -0.66
DNMT1-224ENST00000591764 KLRG2A4D1S0 409 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-224ENST00000591764 IARSP41252 1262 aaKnown RBP10.9□□□□□ -0.66
DNMT1-224ENST00000591764 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
DNMT1-224ENST00000591764 MAP2K1Q02750 393 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-224ENST00000591764 CNGB1Q14028 1251 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-224ENST00000591764 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
DNMT1-224ENST00000591764 GPC2Q8N158 579 aa10.9□□□□□ -0.66
DNMT1-224ENST00000591764 C7orf43Q8WVR3 580 aa10.9□□□□□ -0.66
DNMT1-224ENST00000591764 BEGAINQ9BUH8 593 aa10.9□□□□□ -0.66
DNMT1-224ENST00000591764 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
DNMT1-224ENST00000591764 TMX4Q9H1E5 349 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-224ENST00000591764 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
DNMT1-224ENST00000591764 RNF123Q5XPI4 1314 aa10.89□□□□□ -0.67
DNMT1-224ENST00000591764 HTATSF1O43719 755 aaKnown RBP10.89□□□□□ -0.67
DNMT1-224ENST00000591764 U2AF1L5P0DN76 240 aaPredicted RBP10.89□□□□□ -0.67
DNMT1-224ENST00000591764 VEGFBP49765 207 aa10.89□□□□□ -0.67
DNMT1-224ENST00000591764 U2AF1Q01081 240 aaKnown RBP eCLIP10.89□□□□□ -0.67
DNMT1-224ENST00000591764 FUT2Q10981 343 aa10.89□□□□□ -0.67
DNMT1-224ENST00000591764 PSMD1Q99460 953 aa10.89□□□□□ -0.67
DNMT1-224ENST00000591764 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
DNMT1-224ENST00000591764 ABT1Q9ULW3 272 aaKnown RBP10.89□□□□□ -0.67
DNMT1-224ENST00000591764 RASSF10A6NK89 507 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 FAM177BA6PVY3 158 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 FZD9O00144 591 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 KCNQ3O43525 872 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 ECE1P42892 770 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 PIP4K2AP48426 406 aaPredicted RBP10.88□□□□□ -0.67
DNMT1-224ENST00000591764 DEFB115Q30KQ5 88 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 MORN1Q5T089 497 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 KIF6Q6ZMV9 814 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 CNTROBQ8N137 903 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 PNISRQ8TF01 805 aaKnown RBP10.88□□□□□ -0.67
DNMT1-224ENST00000591764 RPGRQ92834 1020 aaKnown RBP10.88□□□□□ -0.67
DNMT1-224ENST00000591764 LAMB4A4D0S4 1761 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 ADAMTSL1Q8N6G6 1762 aa10.88□□□□□ -0.67
DNMT1-224ENST00000591764 MCM10Q7L590 875 aa10.87□□□□□ -0.67
DNMT1-224ENST00000591764 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
DNMT1-224ENST00000591764 SYNE4Q8N205 404 aa10.87□□□□□ -0.67
DNMT1-224ENST00000591764 PHACTR3Q96KR7 559 aa10.87□□□□□ -0.67
DNMT1-224ENST00000591764 SPSB2Q99619 263 aa10.87□□□□□ -0.67
DNMT1-224ENST00000591764 ERVV-1B6SEH8 477 aa10.86□□□□□ -0.67
DNMT1-224ENST00000591764 LBX1P52954 281 aa10.86□□□□□ -0.67
DNMT1-224ENST00000591764 CRY2Q49AN0 593 aa10.86□□□□□ -0.67
DNMT1-224ENST00000591764 MAP1SQ66K74 1059 aaPredicted RBP10.86□□□□□ -0.67
DNMT1-224ENST00000591764 IBTKQ9P2D0 1353 aaPredicted RBP10.86□□□□□ -0.67
DNMT1-224ENST00000591764 WDR33Q9C0J8 1336 aaKnown RBP10.85□□□□□ -0.67
DNMT1-224ENST00000591764 RIC1Q4ADV7 1423 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 PRAMEF22A3QJZ6 481 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 GCGRP47871 477 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
DNMT1-224ENST00000591764 ZNF697Q5TEC3 545 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 NIM1KQ8IY84 436 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 LARGE2Q8N3Y3 721 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 THAP11Q96EK4 314 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 RBM17Q96I25 401 aaKnown RBP10.85□□□□□ -0.67
DNMT1-224ENST00000591764 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
DNMT1-224ENST00000591764 GJA3Q9Y6H8 435 aa10.85□□□□□ -0.67
DNMT1-224ENST00000591764 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
DNMT1-224ENST00000591764 USP50Q70EL3 339 aaPredicted RBP10.84□□□□□ -0.67
DNMT1-224ENST00000591764 NBPF15Q8N660 670 aa10.84□□□□□ -0.67
DNMT1-224ENST00000591764 SLC27A5Q9Y2P5 690 aa10.84□□□□□ -0.67
DNMT1-224ENST00000591764 MAP3K15Q6ZN16 1313 aa10.84□□□□□ -0.67
DNMT1-224ENST00000591764 TRPM7Q96QT4 1865 aa10.83□□□□□ -0.68
DNMT1-224ENST00000591764 ABCC12Q96J65 1359 aa10.83□□□□□ -0.68
DNMT1-224ENST00000591764 HSPA8P11142 646 aaKnown RBP10.83□□□□□ -0.68
DNMT1-224ENST00000591764 HLFQ16534 295 aa10.83□□□□□ -0.68
DNMT1-224ENST00000591764 OLFM4Q6UX06 510 aa10.83□□□□□ -0.68
DNMT1-224ENST00000591764 PPP1R42Q7Z4L9 355 aa10.83□□□□□ -0.68
DNMT1-224ENST00000591764 VPS33BQ9H267 617 aa10.83□□□□□ -0.68
DNMT1-224ENST00000591764 NUP98P52948 1817 aa10.83□□□□□ -0.68
DNMT1-224ENST00000591764 CA12O43570 354 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 GDF9O60383 454 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 HOXA10P31260 410 aaPredicted RBP10.82□□□□□ -0.68
DNMT1-224ENST00000591764 DCTN1Q14203 1278 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 PARP10Q53GL7 1025 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 NGEFQ8N5V2 710 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 SUPT20HQ8NEM7 779 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 ABHD8Q96I13 439 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 CAPNS2Q96L46 248 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 CRAMP1Q96RY5 1269 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 PNNQ9H307 717 aaKnown RBP10.82□□□□□ -0.68
DNMT1-224ENST00000591764 THSD7BQ9C0I4 1608 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 ERBB4Q15303 1308 aa10.82□□□□□ -0.68
DNMT1-224ENST00000591764 TNFRSF10AO00220 468 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 PPIP5K2O43314 1243 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 PRR20EP86478 221 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 PRR20CP86479 221 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 PRR20DP86480 221 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 PRR20BP86481 221 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 PRR20AP86496 221 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 GRM1Q13255 1194 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 SULF1Q8IWU6 871 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 FAM160A2Q8N612 972 aaPredicted RBP10.81□□□□□ -0.68
DNMT1-224ENST00000591764 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
DNMT1-224ENST00000591764 GPR101Q96P66 508 aaPredicted RBP10.81□□□□□ -0.68
DNMT1-224ENST00000591764 RRP7AQ9Y3A4 280 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms