RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 CASP7P55210 303 aa22.8■■□□□ 1.24
VAT1-208ENST00000590924 ZNF280AP59817 542 aaPredicted RBP22.8■■□□□ 1.24
VAT1-208ENST00000590924 RBM26Q5T8P6 1007 aaKnown RBP22.8■■□□□ 1.24
VAT1-208ENST00000590924 GMLQ99445 158 aa22.8■■□□□ 1.24
VAT1-208ENST00000590924 AOC2O75106 756 aa22.79■■□□□ 1.24
VAT1-208ENST00000590924 USP17L3A6NCW0 530 aa22.78■■□□□ 1.24
VAT1-208ENST00000590924 USP17L4A6NCW7 530 aa22.78■■□□□ 1.24
VAT1-208ENST00000590924 CCT4P50991 539 aaKnown RBP22.78■■□□□ 1.24
VAT1-208ENST00000590924 DLK2Q6UY11 383 aa22.78■■□□□ 1.24
VAT1-208ENST00000590924 USP17L1Q7RTZ2 530 aa22.78■■□□□ 1.24
VAT1-208ENST00000590924 GGA3Q9NZ52 723 aa22.78■■□□□ 1.24
VAT1-208ENST00000590924 WTIPA6NIX2 430 aaPredicted RBP22.77■■□□□ 1.24
VAT1-208ENST00000590924 ADM5C9JUS6 153 aa22.77■■□□□ 1.24
VAT1-208ENST00000590924 CSF1RP07333 972 aa22.77■■□□□ 1.24
VAT1-208ENST00000590924 ITGA6P23229 1130 aa22.77■■□□□ 1.24
VAT1-208ENST00000590924 IGHMBP2P38935 993 aaKnown RBP22.77■■□□□ 1.24
VAT1-208ENST00000590924 BRPF1P55201 1214 aaPredicted RBP22.77■■□□□ 1.24
VAT1-208ENST00000590924 HUNKP57058 714 aa22.77■■□□□ 1.24
VAT1-208ENST00000590924 ECM29Q5VYK3 1845 aa22.76■■□□□ 1.23
VAT1-208ENST00000590924 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
VAT1-208ENST00000590924 SULF1Q8IWU6 871 aa22.76■■□□□ 1.23
VAT1-208ENST00000590924 GBA2Q9HCG7 927 aaPredicted RBP22.76■■□□□ 1.23
VAT1-208ENST00000590924 LEMD3Q9Y2U8 911 aa22.76■■□□□ 1.23
VAT1-208ENST00000590924 PAPPA2Q9BXP8 1791 aa22.76■■□□□ 1.23
VAT1-208ENST00000590924 CA12O43570 354 aa22.75■■□□□ 1.23
VAT1-208ENST00000590924 USP17L8P0C7I0 530 aa22.75■■□□□ 1.23
VAT1-208ENST00000590924 NOGQ13253 232 aa22.75■■□□□ 1.23
VAT1-208ENST00000590924 ASTN2O75129 1339 aaPredicted RBP22.75■■□□□ 1.23
VAT1-208ENST00000590924 C2orf69Q8N8R5 385 aa22.74■■□□□ 1.23
VAT1-208ENST00000590924 ANKRD2Q9GZV1 360 aa22.74■■□□□ 1.23
VAT1-208ENST00000590924 COA1Q9GZY4 146 aa22.74■■□□□ 1.23
VAT1-208ENST00000590924 SCARF1Q14162 830 aa22.73■■□□□ 1.23
VAT1-208ENST00000590924 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
VAT1-208ENST00000590924 MPHOSPH8Q99549 860 aa22.73■■□□□ 1.23
VAT1-208ENST00000590924 MYOZ2Q9NPC6 264 aa22.73■■□□□ 1.23
VAT1-208ENST00000590924 MYO3BQ8WXR4 1341 aa22.73■■□□□ 1.23
VAT1-208ENST00000590924 PITPNM2Q9BZ72 1349 aa22.73■■□□□ 1.23
VAT1-208ENST00000590924 DACT2Q5SW24 774 aa22.72■■□□□ 1.23
VAT1-208ENST00000590924 ANGEL2Q5VTE6 544 aaKnown RBP22.72■■□□□ 1.23
VAT1-208ENST00000590924 RGMBQ6NW40 437 aa22.72■■□□□ 1.23
VAT1-208ENST00000590924 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
VAT1-208ENST00000590924 ZNF804BA4D1E1 1349 aa22.72■■□□□ 1.23
VAT1-208ENST00000590924 F6X3S4 739 aa22.71■■□□□ 1.23
VAT1-208ENST00000590924 BEND3Q5T5X7 828 aa22.71■■□□□ 1.23
VAT1-208ENST00000590924 STRIP1Q5VSL9 837 aa22.71■■□□□ 1.23
VAT1-208ENST00000590924 TXNRD3Q86VQ6 643 aa22.71■■□□□ 1.23
VAT1-208ENST00000590924 CDCA5Q96FF9 252 aa22.71■■□□□ 1.23
VAT1-208ENST00000590924 ANKRD18BA2A2Z9 1011 aa22.7■■□□□ 1.22
VAT1-208ENST00000590924 FAM155AB1AL88 458 aaPredicted RBP22.7■■□□□ 1.22
VAT1-208ENST00000590924 TSKSQ9UJT2 592 aa22.7■■□□□ 1.22
VAT1-208ENST00000590924 FOXO4P98177 505 aa22.69■■□□□ 1.22
VAT1-208ENST00000590924 CHRNDQ07001 517 aa22.69■■□□□ 1.22
VAT1-208ENST00000590924 CCDC102AQ96A19 550 aa22.69■■□□□ 1.22
VAT1-208ENST00000590924 KLRK1P26718 216 aa22.68■■□□□ 1.22
VAT1-208ENST00000590924 OGFOD1Q8N543 542 aa22.68■■□□□ 1.22
VAT1-208ENST00000590924 ZIC5Q96T25 663 aa22.68■■□□□ 1.22
VAT1-208ENST00000590924 MMP14P50281 582 aa22.67■■□□□ 1.22
VAT1-208ENST00000590924 IFIT5Q13325 482 aaKnown RBP22.67■■□□□ 1.22
VAT1-208ENST00000590924 SSH1Q8WYL5 1049 aa22.67■■□□□ 1.22
VAT1-208ENST00000590924 FBXW7Q969H0 707 aa22.67■■□□□ 1.22
VAT1-208ENST00000590924 ABHD8Q96I13 439 aa22.67■■□□□ 1.22
VAT1-208ENST00000590924 MXD3Q9BW11 206 aa22.67■■□□□ 1.22
VAT1-208ENST00000590924 GRM8O00222 908 aa22.66■■□□□ 1.22
VAT1-208ENST00000590924 KCNJ4P48050 445 aa22.66■■□□□ 1.22
VAT1-208ENST00000590924 ZNF157P51786 506 aaPredicted RBP22.66■■□□□ 1.22
VAT1-208ENST00000590924 RARSP54136 660 aaKnown RBP22.66■■□□□ 1.22
VAT1-208ENST00000590924 FKBP1BP68106 108 aa22.66■■□□□ 1.22
VAT1-208ENST00000590924 IRS2Q9Y4H2 1338 aa22.65■■□□□ 1.22
VAT1-208ENST00000590924 SLC10A3P09131 477 aa22.65■■□□□ 1.22
VAT1-208ENST00000590924 NBPF9Q3BBW0 867 aa22.65■■□□□ 1.22
VAT1-208ENST00000590924 TTLL5Q6EMB2 1281 aa22.65■■□□□ 1.22
VAT1-208ENST00000590924 C15orf52Q6ZUT6 534 aaKnown RBP22.65■■□□□ 1.22
VAT1-208ENST00000590924 MRPL50Q8N5N7 158 aaKnown RBP22.65■■□□□ 1.22
VAT1-208ENST00000590924 ARAP2Q8WZ64 1704 aa22.65■■□□□ 1.22
VAT1-208ENST00000590924 WNT10BO00744 389 aa22.64■■□□□ 1.21
VAT1-208ENST00000590924 CHMP3Q9Y3E7 222 aa22.64■■□□□ 1.21
VAT1-208ENST00000590924 ALDH1L1O75891 902 aa22.63■■□□□ 1.21
VAT1-208ENST00000590924 LMBR1LQ6UX01 489 aa22.63■■□□□ 1.21
VAT1-208ENST00000590924 CD209Q9NNX6 404 aa22.63■■□□□ 1.21
VAT1-208ENST00000590924 GTF2IP78347 998 aa22.62■■□□□ 1.21
VAT1-208ENST00000590924 KIF23Q02241 960 aaPredicted RBP22.62■■□□□ 1.21
VAT1-208ENST00000590924 CCDC57Q2TAC2 916 aa22.62■■□□□ 1.21
VAT1-208ENST00000590924 EPHA10Q5JZY3 1008 aa22.62■■□□□ 1.21
VAT1-208ENST00000590924 SMC4Q9NTJ3 1288 aa22.62■■□□□ 1.21
VAT1-208ENST00000590924 SAGE1Q9NXZ1 904 aa22.62■■□□□ 1.21
VAT1-208ENST00000590924 SNAP23O00161 211 aa22.61■■□□□ 1.21
VAT1-208ENST00000590924 TAF5LO75529 589 aa22.61■■□□□ 1.21
VAT1-208ENST00000590924 KIAA0825Q8IV33 1275 aa22.61■■□□□ 1.21
VAT1-208ENST00000590924 SRCIN1Q9C0H9 1055 aa22.61■■□□□ 1.21
VAT1-208ENST00000590924 C9orf78Q9NZ63 289 aaPredicted RBP22.61■■□□□ 1.21
VAT1-208ENST00000590924 HDAC9Q9UKV0 1011 aa22.61■■□□□ 1.21
VAT1-208ENST00000590924 SCAF8Q9UPN6 1271 aaKnown RBP22.61■■□□□ 1.21
VAT1-208ENST00000590924 PTPRCP08575 1304 aa22.6■■□□□ 1.21
VAT1-208ENST00000590924 SLC4A10Q6U841 1118 aa22.6■■□□□ 1.21
VAT1-208ENST00000590924 RASAL3Q86YV0 1011 aa22.6■■□□□ 1.21
VAT1-208ENST00000590924 HELBQ8NG08 1087 aaPredicted RBP22.6■■□□□ 1.21
VAT1-208ENST00000590924 LAMB1P07942 1786 aa22.6■■□□□ 1.21
VAT1-208ENST00000590924 SASH1O94885 1247 aa22.59■■□□□ 1.21
VAT1-208ENST00000590924 LDHAL6AQ6ZMR3 332 aa22.59■■□□□ 1.21
VAT1-208ENST00000590924 ZBED3Q96IU2 234 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms