RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 HAUS7Q99871 368 aa17.15■□□□□ 0.34
LRP3-203ENST00000590278 GTPBP4Q9BZE4 634 aaKnown RBP17.15■□□□□ 0.34
LRP3-203ENST00000590278 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
LRP3-203ENST00000590278 PTPN21Q16825 1174 aa17.15■□□□□ 0.34
LRP3-203ENST00000590278 MRPS27Q92552 414 aaKnown RBP17.15■□□□□ 0.34
LRP3-203ENST00000590278 SLC52A2Q9HAB3 445 aa17.15■□□□□ 0.34
LRP3-203ENST00000590278 PCDHA7Q9UN72 937 aa17.15■□□□□ 0.34
LRP3-203ENST00000590278 CAVIN2O95810 425 aa17.15■□□□□ 0.34
LRP3-203ENST00000590278 IFNKQ9P0W0 207 aa17.15■□□□□ 0.34
LRP3-203ENST00000590278 UTYO14607 1347 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
LRP3-203ENST00000590278 ADD1P35611 737 aaKnown RBP17.14■□□□□ 0.33
LRP3-203ENST00000590278 NDUFA8P51970 172 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 SNW1Q13573 536 aaKnown RBP17.14■□□□□ 0.33
LRP3-203ENST00000590278 DPCR1Q3MIW9 517 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 UTP14CQ5TAP6 766 aaKnown RBP17.14■□□□□ 0.33
LRP3-203ENST00000590278 DHX40Q8IX18 779 aaKnown RBP17.14■□□□□ 0.33
LRP3-203ENST00000590278 KIF18AQ8NI77 898 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 ALDH8A1Q9H2A2 487 aaPredicted RBP17.14■□□□□ 0.33
LRP3-203ENST00000590278 OGFRQ9NZT2 677 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 CTNNA3Q9UI47 895 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
LRP3-203ENST00000590278 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 ZBTB3Q9H5J0 574 aa17.14■□□□□ 0.33
LRP3-203ENST00000590278 HSPD1P10809 573 aaKnown RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 GNL2Q13823 731 aaKnown RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 C8orf76Q96K31 380 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 MARCKSP29966 332 aaPredicted RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 PDIA3P30101 505 aaKnown RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 STK11IPQ8N1F8 1099 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 FEZ1Q99689 392 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 CHRNA2Q15822 529 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 HSP90AA4PQ58FG1 418 aa17.13■□□□□ 0.33
LRP3-203ENST00000590278 FAM177A1Q8N128 213 aaPredicted RBP17.13■□□□□ 0.33
LRP3-203ENST00000590278 LRRC24Q50LG9 513 aa17.12■□□□□ 0.33
LRP3-203ENST00000590278 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
LRP3-203ENST00000590278 XPO4Q9C0E2 1151 aaKnown RBP17.12■□□□□ 0.33
LRP3-203ENST00000590278 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
LRP3-203ENST00000590278 SYT10Q6XYQ8 523 aa17.12■□□□□ 0.33
LRP3-203ENST00000590278 CABLES1Q8TDN4 633 aa17.12■□□□□ 0.33
LRP3-203ENST00000590278 LTN1O94822 1766 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 RXRAP19793 462 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
LRP3-203ENST00000590278 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 DDX17Q92841 729 aaKnown RBP17.11■□□□□ 0.33
LRP3-203ENST00000590278 KLF18A0A0U1RQI7 1052 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 NEMFO60524 1076 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
LRP3-203ENST00000590278 CABP4P57796 275 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
LRP3-203ENST00000590278 RGPD2P0DJD1 1756 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 CCZ1BP86790 482 aa17.11■□□□□ 0.33
LRP3-203ENST00000590278 CCZ1P86791 482 aaPredicted RBP17.11■□□□□ 0.33
LRP3-203ENST00000590278 ERICH4A6NGS2 130 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 SLC3A2P08195 630 aaKnown RBP17.1■□□□□ 0.33
LRP3-203ENST00000590278 CDC25BP30305 580 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 KMT5BQ4FZB7 885 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 SARM1Q6SZW1 724 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 NRDCO43847 1150 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 RALYLQ86SE5 291 aaKnown RBP17.1■□□□□ 0.33
LRP3-203ENST00000590278 ANKLE2Q86XL3 938 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 MAST3O60307 1309 aa17.1■□□□□ 0.33
LRP3-203ENST00000590278 TPM4P67936 248 aa17.09■□□□□ 0.33
LRP3-203ENST00000590278 PUS3Q9BZE2 481 aaKnown RBP17.09■□□□□ 0.33
LRP3-203ENST00000590278 A0A1B0GUL7 405 aa17.09■□□□□ 0.33
LRP3-203ENST00000590278 M0R2C6 588 aa17.09■□□□□ 0.33
LRP3-203ENST00000590278 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
LRP3-203ENST00000590278 SPTLC2O15270 562 aa17.09■□□□□ 0.33
LRP3-203ENST00000590278 APPP05067 770 aa17.09■□□□□ 0.33
LRP3-203ENST00000590278 FBXO38Q6PIJ6 1188 aa17.09■□□□□ 0.33
LRP3-203ENST00000590278 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
LRP3-203ENST00000590278 SLU7O95391 586 aaKnown RBP17.08■□□□□ 0.33
LRP3-203ENST00000590278 PHKG2P15735 406 aa17.08■□□□□ 0.33
LRP3-203ENST00000590278 ERCC6LQ2NKX8 1250 aa17.08■□□□□ 0.33
LRP3-203ENST00000590278 TAF7LQ5H9L4 462 aa17.08■□□□□ 0.33
LRP3-203ENST00000590278 TTLL7Q6ZT98 887 aa17.08■□□□□ 0.33
LRP3-203ENST00000590278 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.33
LRP3-203ENST00000590278 CRYBG1Q9Y4K1 1723 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 GOLGA8FQ08AF8 430 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 GOLGA8DPQ0D2H9 430 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 ZNF397Q8NF99 534 aaPredicted RBP17.08■□□□□ 0.32
LRP3-203ENST00000590278 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.32
LRP3-203ENST00000590278 RNF113AO15541 343 aaKnown RBP17.08■□□□□ 0.32
LRP3-203ENST00000590278 PRC1O43663 620 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 SERPINC1P01008 464 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 FDPSP14324 419 aaKnown RBP17.08■□□□□ 0.32
LRP3-203ENST00000590278 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.32
LRP3-203ENST00000590278 FMR1NBQ8N0W7 255 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms