RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FER1L6Q2WGJ9 1857 aa16.77■□□□□ 0.27
VMP1-210ENST00000589823 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.27
VMP1-210ENST00000589823 MED23Q9ULK4 1368 aa16.77■□□□□ 0.27
VMP1-210ENST00000589823 A0A1B0GUL7 405 aa16.76■□□□□ 0.27
VMP1-210ENST00000589823 WTIPA6NIX2 430 aaPredicted RBP16.76■□□□□ 0.27
VMP1-210ENST00000589823 G3V3G9 751 aa16.76■□□□□ 0.27
VMP1-210ENST00000589823 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
VMP1-210ENST00000589823 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
VMP1-210ENST00000589823 IARSP41252 1262 aaKnown RBP16.76■□□□□ 0.27
VMP1-210ENST00000589823 DCAF8Q5TAQ9 597 aa16.76■□□□□ 0.27
VMP1-210ENST00000589823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.76■□□□□ 0.27
VMP1-210ENST00000589823 ZNF609O15014 1411 aa16.76■□□□□ 0.27
VMP1-210ENST00000589823 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
VMP1-210ENST00000589823 TIMM10P62072 90 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 AOC3Q16853 763 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 CAVIN4Q5BKX8 364 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 C15orf52Q6ZUT6 534 aaKnown RBP16.75■□□□□ 0.27
VMP1-210ENST00000589823 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
VMP1-210ENST00000589823 AACSQ86V21 672 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 LARGE2Q8N3Y3 721 aa16.75■□□□□ 0.27
VMP1-210ENST00000589823 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
VMP1-210ENST00000589823 LMNB1P20700 586 aa16.74■□□□□ 0.27
VMP1-210ENST00000589823 ZNF804AQ7Z570 1209 aa16.74■□□□□ 0.27
VMP1-210ENST00000589823 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
VMP1-210ENST00000589823 KLRK1P26718 216 aa16.73■□□□□ 0.27
VMP1-210ENST00000589823 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
VMP1-210ENST00000589823 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
VMP1-210ENST00000589823 XAGE2Q96GT9 111 aa16.73■□□□□ 0.27
VMP1-210ENST00000589823 CCDC8Q9H0W5 538 aaPredicted RBP16.73■□□□□ 0.27
VMP1-210ENST00000589823 ADORA1P30542 326 aa16.72■□□□□ 0.27
VMP1-210ENST00000589823 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
VMP1-210ENST00000589823 GYG1P46976 350 aa16.72■□□□□ 0.27
VMP1-210ENST00000589823 TXNRD3Q86VQ6 643 aa16.72■□□□□ 0.27
VMP1-210ENST00000589823 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
VMP1-210ENST00000589823 FAM84BQ96KN1 310 aaPredicted RBP16.72■□□□□ 0.27
VMP1-210ENST00000589823 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
VMP1-210ENST00000589823 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 NUCB1Q02818 461 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 CHD1LQ86WJ1 897 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 DBNDD2Q9BQY9 259 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 LNPKQ9C0E8 428 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
VMP1-210ENST00000589823 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
VMP1-210ENST00000589823 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
VMP1-210ENST00000589823 BCAMP50895 628 aa16.7■□□□□ 0.26
VMP1-210ENST00000589823 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
VMP1-210ENST00000589823 CCDC102BQ68D86 513 aa16.7■□□□□ 0.26
VMP1-210ENST00000589823 FBXO33Q7Z6M2 555 aa16.7■□□□□ 0.26
VMP1-210ENST00000589823 DBNDD1Q9H9R9 158 aa16.7■□□□□ 0.26
VMP1-210ENST00000589823 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
VMP1-210ENST00000589823 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
VMP1-210ENST00000589823 ECE2O60344 883 aa16.69■□□□□ 0.26
VMP1-210ENST00000589823 PRELPP51888 382 aa16.69■□□□□ 0.26
VMP1-210ENST00000589823 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
VMP1-210ENST00000589823 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
VMP1-210ENST00000589823 GPATCH3Q96I76 525 aa16.69■□□□□ 0.26
VMP1-210ENST00000589823 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
VMP1-210ENST00000589823 ARAP2Q8WZ64 1704 aa16.69■□□□□ 0.26
VMP1-210ENST00000589823 PHKA1P46020 1223 aa16.68■□□□□ 0.26
VMP1-210ENST00000589823 PODNQ7Z5L7 613 aa16.68■□□□□ 0.26
VMP1-210ENST00000589823 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
VMP1-210ENST00000589823 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
VMP1-210ENST00000589823 UTRNP46939 3433 aa16.68■□□□□ 0.26
VMP1-210ENST00000589823 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
VMP1-210ENST00000589823 IL1R1P14778 569 aa16.67■□□□□ 0.26
VMP1-210ENST00000589823 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
VMP1-210ENST00000589823 SEMA3EO15041 775 aa16.66■□□□□ 0.26
VMP1-210ENST00000589823 EIF6P56537 245 aaKnown RBP16.66■□□□□ 0.26
VMP1-210ENST00000589823 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
VMP1-210ENST00000589823 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
VMP1-210ENST00000589823 COL4A5P29400 1685 aa16.65■□□□□ 0.26
VMP1-210ENST00000589823 SBF1O95248 1867 aa16.65■□□□□ 0.26
VMP1-210ENST00000589823 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
VMP1-210ENST00000589823 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
VMP1-210ENST00000589823 ZNF512BQ96KM6 892 aaPredicted RBP16.65■□□□□ 0.26
VMP1-210ENST00000589823 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
VMP1-210ENST00000589823 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
VMP1-210ENST00000589823 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
VMP1-210ENST00000589823 YDJCA8MPS7 323 aa16.64■□□□□ 0.25
VMP1-210ENST00000589823 FZD9O00144 591 aa16.64■□□□□ 0.25
VMP1-210ENST00000589823 MX1P20591 662 aa16.64■□□□□ 0.25
VMP1-210ENST00000589823 CHAF1AQ13111 956 aaPredicted RBP16.64■□□□□ 0.25
VMP1-210ENST00000589823 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.25
VMP1-210ENST00000589823 ZC3H4Q9UPT8 1303 aaKnown RBP16.64■□□□□ 0.25
VMP1-210ENST00000589823 DICER1Q9UPY3 1922 aaKnown RBP16.63■□□□□ 0.25
VMP1-210ENST00000589823 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 ERC2O15083 957 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 ZBTB22O15209 634 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 RAD17O75943 681 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 GTF2IP78347 998 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 RASGRF1Q13972 1273 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 TNIP1Q15025 636 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 TTLL5Q6EMB2 1281 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 CIAPIN1Q6FI81 312 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms